Catherine M. Heppell

Denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in a temperate re-connected floodplain

The relative magnitudes of, and factors controlling, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) were measured in the soil of a re-connected temperate floodplain divided into four different land management zones (grazing grassland, hay meadow, fritillary meadow and a buffer zone). Soil samples were collected from each zone to measure their respective potentials for nitrate attenuation using 15N both at the surface and at depth in the soil column and additional samples were collected to measure the lability of the organic carbon. Denitrification capacity ranged between 0.4 and 4.2 (μmol N g(-1) dry soil d(-1)) across the floodplain topsoil and DNRA capacity was an order of magnitude lower (0.01-0.71 μmol N g(-1) d(-1)). Land management practice had a significant effect on denitrification but no significant effects were apparent for DNRA. In this nitrogen-rich landscape, spatial heterogeneity in denitrification was explained by differences in lability and the magnitude of organic carbon associated with different management practices (mowing and grazing). The lability of organic carbon was significantly higher in grazing grassland in comparison to other ungrazed areas of the floodplain, and consequently denitrification capacity was also highest in this area. Our results indicate that bacteria capable of DNRA do survive in frequently flooded riparian zones, and to a limited extent, compete with denitrification for nitrate, acting to retain and recycle nitrogen in the floodplain. Exponential declines in both denitrification and DNRA capacity with depth in the floodplain soils of a hay meadow and buffer zone were controlled primarily by the organic carbon content of the soils. Furthermore, grazing could be employed in re-connected, temperate floodplains to enhance the potential for nitrate removal from floodwaters via denitrification.

The interplay between transport and reaction rates as controls on nitrate attenuation in permeable, streambed sediments

Anthropogenic nitrogen fixation and subsequent use of this nitrogen as fertilizer has greatly disturbed the global nitrogen cycle. Rivers are recognized hotspots of nitrogen removal in the landscape as interaction between surface water and sediments creates heterogeneous redox environments conducive for nitrogen transformations. Our understanding of riverbed nitrogen dynamics to date comes mainly from shallow sediments or hyporheic exchange flow pathways with comparatively little attention paid to groundwater-fed, gaining reaches. We have used 15N techniques to quantify in situ rates of nitrate removal to 1m depth within a groundwater-fed riverbed where subsurface hydrology ranged from strong upwelling to predominantly horizontal water fluxes. We combine these rates with detailed hydrologic measurements to investigate the interplay between biogeochemical activity and water transport in controlling nitrogen attenuation along upwelling flow pathways. Nitrate attenuation occurred via denitrification rather than dissimilatory nitrate reduction to ammonium or anammox (range = 12 to >17000 nmol 15N L-1 h-1). Overall, nitrate removal within the upwelling groundwater was controlled by water flux rather than reaction rate (i.e. Damkohler numbers 80% of nitrate removal occurs within sediments not exposed to hyporheic exchange flows under baseflow conditions, illustrating the importance of deep sediments as nitrate sinks in upwelling systems.

Sediment transfer and accumulation in two contrasting salt marsh/mudflat systems: the Seine estuary (France) and the Medway estuary (UK)

Understanding the dynamics of fine sediment transport across the upper intertidal zone is critical in managing the erosion and accretion of intertidal areas, and in managed realignment/estuarine habitat recreation strategies. This paper examines the transfer of sediments between salt marsh and mudflat environments in two contrasting macrotidal estuaries: the Seine (France) and the Medway (UK), using data collected during two joint field seasons undertaken by the Anglo-French RIMEW project (Rives-Manche Estuary Watch). High-resolution ADCP, Altimeter, OBS and ASM measurements from mudflat and marsh surface environments have been combined with sediment trap data to examine short-term sediment transport processes under spring tide and storm flow conditions. In addition, the longer-term accumulation of sediment in each salt marsh system has been examined via radiometric dating of sediment cores. In the Seine, rapid sediment accumulation and expansion of salt marsh areas, and subsequent loss of open intertidal mudflats, is a major problem, and the data collected here indicate a distinct net landward flux of sediments into the marsh interior. Suspended sediment fluxes are much higher than in the Medway estuary (averaging 0.09 g/m3/s), and vertical accumulation rates at the salt marsh/mudflat boundary exceed 3 cm/y. Suspended sediment data collected during storm surge conditions indicate that significant in-wash of fine sediments into the marsh interior can occur during (and following) these high-magnitude events. In contrast to the Seine, the Medway is undergoing erosion and general loss of salt marsh areas. Suspended sediment fluxes are of the order of 0.03 g/m3/s, and the marsh system here has much lower rates of vertical accretion (sediment accumulation rates are ca. 4 mm/y). Current velocity data for the Medway site indicate higher velocities on the ebb tide than occur on the flood tide, which may be sufficient to remobilise sediments deposited on the previous tide and so force net removal of material from the marsh.

River–floodplain hydrology of an embanked lowland Chalk river and initial response to embankment removal

Abstract Rivers have been channelized, deepened and constrained by embankments for centuries to increase agricultural productivity and improve flood defences. This has decreased the hydrological connectivity between rivers and their floodplains. We quantified the hydrological regime of a wet grassland meadow prior to and after the removal of river embankments. River and groundwater chemistry were also monitored to examine hydrological controls on floodplain nutrient status. Prior to restoration, the highest river flows (∼2 m3 s−1) were retained by the embankments. Under these flow conditions the usual hydraulic gradient from the floodplain to the river was reversed so that subsurface flows were directed towards the floodplain. Groundwater was depleted in dissolved oxygen (mean: 0.6 mg O2 L−1) and nitrate (mean: 0.5 mg NO3 −-N L−1) relative to river water (mean: 10.8 mg O2 L−1 and 6.2 mg NO3 −-N L−1, respectively). Removal of the embankments has reduced the channel capacity by an average of 60%. This has facilitated over-bank flow which is likely to favour conditions for improved flood storage and removal of river nutrients by floodplain sediments. Editor Z.W. Kundzewicz; Associate editor K. Heal Citation Clilverd, H.M., Thompson, J.R., Heppell, C.M., Sayer, C.D., and Axmacher, J.C., 2013. River–floodplain hydrology of an embanked lowland Chalk river and initial response to embankment removal. Hydrological Sciences Journal, 58 (3), 627–650.

Modelling flow and inorganic nitrogen dynamics on the Hampshire Avon: Linking upstream processes to downstream water quality

Managing diffuse pollution in catchments is a major issue for environmental managers planning to meet water quality standards and comply with the EU Water Framework Directive. A major source of diffuse pollution is from nitrogen, with high nitrate concentrations affecting water supplies and in-stream ecology. A dynamic, process based model of flow, nitrate and ammonium (INCA-N) has been applied to the Hampshire Avon as part of the NERC Macronutrient Cycles Programme to link upstream and downstream measurements of water chemistry. The model has been calibrated and validated against Environment Agency discharge and solute chemistry data, as well as a data set collected from a river site immediately upstream of the estuary tidal limit. Upstream measurements of denitrification at six sites have been used to evaluate nitrate removal rates in vegetated and non-vegetated conditions. Results show that sediments underlying vegetation were associated with significantly higher rates of nitrate removal than un-vegetated sediments (with an average increase of 245%). These data have been used to scale up rates of nitrate loss to the whole catchment scale and have been implemented via the model. The effects of streambed geology and macrophyte cover on catchment-scale nitrogen dynamics are explored and nutrient fluxes entering the estuary are evaluated. The model is used to test a strategy for nitrogen reduction assessed using a nitrate vulnerable zone (NVZ) methodology. It suggests that nitrate and ammonium concentrations could be reduced by 10% in 10years and much lower nitrogen level can be achieved but only over a long time period.

Reach‐scale river metabolism across contrasting sub‐catchment geologies: Effect of light and hydrology

Abstract We investigated the seasonal dynamics of in‐stream metabolism at the reach scale (∼ 150 m) of headwaters across contrasting geological sub‐catchments: clay, Greensand, and Chalk of the upper River Avon (UK). Benthic metabolic activity was quantified by aquatic eddy co‐variance while water column activity was assessed by bottle incubations. Seasonal dynamics across reaches were specific for the three types of geologies. During the spring, all reaches were net autotrophic, with rates of up to 290 mmol C m−2 d−1 in the clay reach. During the remaining seasons, the clay and Greensand reaches were net heterotrophic, with peak oxygen consumption of 206 mmol m−2 d−1 during the autumn, while the Chalk reach was net heterotrophic only in winter. Overall, the water column alone still contributed to ∼ 25% of the annual respiration and primary production in all reaches. Net ecosystem metabolism (NEM) across seasons and reaches followed a general linear relationship with increasing stream light availability. Sub‐catchment specific NEM proved to be linearly related to the local hydrological connectivity, quantified as the ratio between base flow and stream discharge, and expressed on a timescale of 9 d on average. This timescale apparently represents the average period of hydrological imprint for carbon turnover within the reaches. Combining a general light response and sub‐catchment specific base flow ratio provided a robust functional relationship for predicting NEM at the reach scale. The novel approach proposed in this study can help facilitate spatial and temporal upscaling of riverine metabolism that may be applicable to a broader spectrum of catchments.

Application of the microbial community coalescence concept to riverine networks: Riverine microbial community coalescence

Flows of water, soil, litter, and anthropogenic materials in and around rivers lead to the mixing of their resident microbial communities and subsequently to a resultant community distinct from its precursors. Consideration of these events through a new conceptual lens, namely, community coalescence, could provide a means of integrating physical, environmental, and ecological mechanisms to predict microbial community assembly patterns better in these habitats. Here, we review field studies of microbial communities in riverine habitats where environmental mixing regularly occurs, interpret some of these studies within the community coalescence framework and posit novel hypotheses and insights that may be gained in riverine microbial ecology through the application of this concept. Particularly in the face of a changing climate and rivers under increasing anthropogenic pressures, knowledge about the factors governing microbial community assembly is essential to forecast and/or respond to changes in ecosystem function. Additionally, there is the potential for microbial ecology studies in rivers to become a driver of theory development: riverine systems are ideal for coalescence studies because regular and predictable environmental mixing occurs. Data appropriate for testing community coalescence theory could be collected with minimal alteration to existing study designs.

Simulation of the hydrological impacts of climate change on a restored floodplain

ABSTRACT Thirty UK Climate Projections 2009 (UKCP09) scenarios are simulated using a MIKE SHE/MIKE 11 model of a restored floodplain in eastern England. Annual precipitation exhibits uncertainty in direction of change. Extreme changes (10 and 90% probability) range between −27 and +30%. The central probability projects small declines (<−4%). Wetter winters and drier summers predominate. Potential evapotranspiration increases for most scenarios (annual range of change: −41 to +2%). Declines in mean discharge predominate (range: −41 to +25%). Reductions of 11–17% are projected for the central probability. High and low flows, and the frequency of bankfull discharge exceedence reduce in most cases. Duration of winter high floodplain water tables declines. Summer water tables are on average at least 0.11 and 0.18 m lower for the 2050s and 2080s, respectively. Flood extent declines in most scenarios. Drier conditions will likely induce ecological responses including impacts on floodplain vegetation.

Headwater gas exchange quantified from O2 mass balances at the reach scale: Reach-scale headwater O2 gas exchange

Abstract Headwater streams are important in the carbon cycle and there is a need to better parametrize and quantify exchange of carbon‐relevant gases. Thus, we characterized variability in the gas exchange coefficient (k 2) and dissolved oxygen (O2) gas transfer velocity (k) in two lowland headwaters of the River Avon (UK). The traditional one‐station open‐water method was complemented by in situ quantification of riverine sources and sinks of O2 (i.e., groundwater inflow, photosynthesis, and respiration in both the water column and benthic compartment) enabling direct hourly estimates of k 2 at the reach–scale (~ 150 m) without relying on the nighttime regression method. Obtained k 2 values ranged from 0.001 h−1 to 0.600 h−1. Average daytime k 2 were a factor two higher than values at night, likely due to diel changes in water temperature and wind. Temperature contributed up to 46% of the variability in k on an hourly scale, but clustering temperature incrementally strengthened the statistical relationship. Our analysis suggested that k variability is aligned with dominant temperature trends rather than with short‐term changes. Similarly, wind correlation with k increased when clustering wind speeds in increments correspondent with dominant variations (1 m s−1). Time scale is thus an important consideration when resolving physical drivers of gas exchange. Mean estimates of k 600 from recent parametrizations proposed for upscaling, when applied to the settings of this study, were found to be in agreement with our independent O2 budget assessment (within < 10%), adding further support to the validity of upscaling efforts aiming at quantifying large‐scale riverine gas emissions.