Charles R. Warren

Mesophyll diffusion conductance to CO2: An unappreciated central player in photosynthesis

Mesophyll diffusion conductance to CO(2) is a key photosynthetic trait that has been studied intensively in the past years. The intention of the present review is to update knowledge of g(m), and highlight the important unknown and controversial aspects that require future work. The photosynthetic limitation imposed by mesophyll conductance is large, and under certain conditions can be the most significant photosynthetic limitation. New evidence shows that anatomical traits, such as cell wall thickness and chloroplast distribution are amongst the stronger determinants of mesophyll conductance, although rapid variations in response to environmental changes might be regulated by other factors such as aquaporin conductance. Gaps in knowledge that should be research priorities for the near future include: how different is mesophyll conductance among phylogenetically distant groups and how has it evolved? Can mesophyll conductance be uncoupled from regulation of the water path? What are the main drivers of mesophyll conductance? The need for mechanistic and phenomenological models of mesophyll conductance and its incorporation in process-based photosynthesis models is also highlighted.

Role of mesophyll diffusion conductance in constraining potential photosynthetic productivity in the field

Limited mesophyll diffusion conductance to CO(2) (g(m)) can significantly constrain plant photosynthesis, but the extent of g(m)-limitation is still imperfectly known. As g(m) scales positively with foliage photosynthetic capacity (A), the CO(2) drawdown from substomatal cavities (C(i)) to chloroplasts (C(C), C(i)-C(C)=A/g(m)) rather than g(m) alone characterizes the mesophyll diffusion limitations of photosynthesis. The dependencies of g(m) on A, foliage structure (leaf dry mass per unit area, M(A)), and the resulting drawdowns across a dataset of 81 species of contrasting foliage structure and photosynthetic potentials measured under non-stressed conditions were analysed to describe the structure-driven potential photosynthetic limitations due to g(m). Further the effects of key environmental stress factors and leaf and plant developmental alterations on g(m) and CO(2) drawdown were evaluated and the implications of varying g(m) on foliage photosynthesis in the field were simulated. The meta-analysis demonstrated that g(m) of non-stressed leaves was negatively correlated with M(A), and despite the positive relationship between g(m) and A, the CO(2) drawdown was larger in leaves with more robust structure. The correlations were stronger with mass-based g(m) and A, probably reflecting the circumstance that mesophyll diffusion is a complex three-dimensional process that scales better with mesophyll volume-weighted than with leaf area-weighted traits. The analysis of key environmental stress effects on g(m) and CO(2) drawdowns demonstrated that the effect of individual stresses on CO(2) drawdowns varies depending on the stress effects on foliage structure and assimilation rates. Leaf diffusion limitations are larger in non-senescent older leaves and also in senescent leaves, again reflecting more robust leaf structure and/or non-co-ordinated alterations in leaf photosynthesis and g(m). According to simulation analyses, in plants with a larger part of the overall diffusion conductance from the ambient atmosphere to the chloroplasts in the mesophyll, photosynthesis is less sensitive to changes in stomatal conductance. Accordingly, in harsher environments that support vegetation with tougher long-living stress-tolerant leaves with lower g(m), reductions in stomatal conductance that are common during stress periods are expected to alter photosynthesis less than in species where a larger part of the total diffusion limitation is determined by stomata. While structural robustness improves plant performance under environmental stress, low g(m) and inherently large CO(2) drawdown in robust leaves limits the photosynthesis of these plants more severely under favourable conditions when stomatal conductance is high. The differences in overall responsiveness to environmental modifications of plants with varying g(m) need consideration in current large-scale ecosystem productivity models.

Estimating the internal conductance to CO2 movement

The concentration of CO2 in the chloroplast is less than atmospheric owing to a series of gas-phase and liquid-phase resistances. For a long time it was assumed that the concentration of CO2 in the chloroplasts is the same as in the intercellular spaces (e.g. as measured by gas exchange). There is mounting evidence that this assumption is invalid and that CO2 concentrations in the chloroplasts are significantly less than intercellular CO2. It is now generally accepted that internal conductance (gi) is a significant limitation to photosynthesis, often as large as that due to stomata. Internal conductance describes this decrease in CO2 concentration between the intercellular spaces and chloroplasts as a function of net photosynthesis [gi = A / (Ci - Cc)]. Internal conductance is commonly estimated by simultaneous measurements of gas exchange and chlorophyll a fluorescence or instantaneous discrimination against 13CO2. These common methods are complemented by three alternative methods based on (a) the difference between intercellular and chloroplastic CO2 photocompensation points, (b) the curvature of an A / Ci curve, and (c) the initial slope of an A / Ci curve v. the estimated initial slope of an A / Cc curve. The theoretical basis and protocols for estimating internal conductance are described. The common methods have poor precision with relative standard deviations commonly > 10%; much less is known of the precision of the three alternative methods. Accuracy of the methods is largely unknown because all methods share some common assumptions and no truly independent and assumption-free method exists. Some assumptions can and should be tested (e.g. the relationship of fluorescence with electron transport). Methods generally require knowledge of either the kinetic parameters of Rubisco, or isotopic fractionation by Rubisco. These parameters are difficult to measure, and thus are generally assumed a priori. For parameters such as these a sensitivity analysis is recommended. One means of improving confidence in gi estimates is by using two or more methods, but it is essential that the methods chosen share as few common assumptions as possible. All methods require accurate and precise measurements of A and Ci - these are best achieved by minimising leaks, maximising the signal-to-noise ratio by using a large leaf area and moderate flow rate, and by taking into account cuticular and boundary layer conductances.

Is photosynthesis related to concentrations of nitrogen and Rubisco in leaves of Australian native plants

The relationships among light-saturated photosynthesis and concentrations of nitrogen and ribulose-1,5- bisphosphate carboxylase/oxygenase (Rubisco, EC 4.1.1.39) in Australian native plants are poorly known, primarily due to the difficulty of extracting and analysing Rubisco from such species. Rubisco may be rapidly quantified in crude extracts of plant tissue by capillary electrophoresis (CE); however, the presence of phenolic compounds in many Australian native plants limits the use of these methods. The addition of insoluble polyvinylpolypyrrolidone (PVPP) during leaf extractions effectively removed phenols permitting quantitation of Rubisco. Relationships among maximum rates of photosynthesis and concentrations of nitrogen and Rubisco were then investigated in ten species native to Australia. Total nitrogen and the major pools of N in foliage varied greatly between species. Equally, within species N-partitioning was highly plastic, as affected by different concentrations and forms of N applied in sand culture (0.5 or 8 mM, nitrate or ammonium). In Hakea prostrata, for example, the proportion of total N present as soluble proteins varied between 43 and 71%, while the proportion of total N present as Rubisco N ranged between 9.4 and 30.0%, and the contribution of Rubisco to soluble proteins varied between 21 and 42%. The measured concentration of Rubisco varied between 40% and 600% of that estimated from enzyme kinetics and measured rates of photosynthesis. Generally there was a large ‘excess’ of Rubisco, and in only two cases was the measured concentration of Rubisco significantly less than predicted. Total N, soluble protein and Rubisco concentrations were poorly related to maximum rates of photosynthesis, while the relationship between photosynthesis and Rubisco was worse than that with N, primarily due to the plants’ variable over-investment in Rubisco.

Variability in mesophyll conductance between barley genotypes, and effects on transpiration efficiency and carbon isotope discrimination

Leaf internal, or mesophyll, conductance to CO(2) (g(m)) is a significant and variable limitation of photosynthesis that also affects leaf transpiration efficiency (TE). Genotypic variation in g(m) and the effect of g(m) on TE were assessed in six barley genotypes (four Hordeum vulgare and two H. bulbosum). Significant variation in g(m) was found between genotypes, and was correlated with photosynthetic rate. The genotype with the highest g(m) also had the highest TE and the lowest carbon isotope discrimination as recorded in leaf tissue (Delta(p)). These results suggest g(m) has unexplored potential to provide TE improvement within crop breeding programmes.

Soil water deficits decrease the internal conductance to CO2 transfer but atmospheric water deficits do not

The internal conductance to CO2 supply from substomatal cavities to sites of carboxylation poses a large limitation to photosynthesis. It is known that internal conductance is decreased by soil water deficits, but it is not known if it is affected by atmospheric water deficits (i.e. leaf to air vapour pressure deficit, VPD). The aim of this paper was to examine the responses of internal conductance to atmospheric and soil water deficits in seedlings of the evergreen perennial Eucalyptus regnans F. Muell and the herbaceous plants Solanum lycopersicum (formerly Lycopersicon esculentum) Mill. and Phaseolus vulgaris L. Internal conductance was estimated with the variable J method from concurrent measurements of gas exchange and fluorescence. In all three species steady-state stomatal conductance decreased by approximately 30% as VPD increased from 1 kPa to 2 kPa. In no species was internal conductance affected by VPD despite large effects on stomatal conductance. In contrast, soil water deficits decreased stomatal conductance and internal conductance of all three species. Decreases in stomatal and internal conductance under water deficit were proportional, but this proportionality differed among species, and thus the relationship between stomatal and internal conductance differed among species. These findings indicate that soil water deficits affect internal conductance while atmospheric water deficits do not. The reasons for this distinction are unknown but are consistent with soil and atmospheric water deficits having differing effects on leaf physiology and/or root-shoot communication.

Importance of mesophyll diffusion conductance in estimation of plant photosynthesis in the field

Mesophyll diffusion conductance to CO(2) (g(m)) is an important leaf characteristic determining the drawdown of CO(2) from substomatal cavities (C(i)) to chloroplasts (C(C)). Finite g(m) results in modifications in the shape of the net assimilation (A) versus C(i) response curves, with the final outcome of reduced maximal carboxylase activity of Rubisco (V(cmax)), and a greater ratio of the capacity for photosynthetic electron transport to V(cmax) (J(max)/V(cmax)) and alterations in mitochondrial respiration rate (R(d)) when estimated from A/C(i) responses without considering g(m). The influence of different Farquhar et al. model parameterizations on daily photosynthesis under non-stressed (C(i) kept constant throughout the day) and stressed conditions (mid-day reduction in C(i)) was compared. The model was parameterized on the basis of A/C(C) curves and A/C(i) curves using both the conventional fitting procedure (V(cmax) and R(d) fitted separately to the linear part of the response curve and J(max) to the saturating part) and a procedure that fitted all parameters simultaneously. The analyses demonstrated that A/C(i) parameterizations overestimated daily assimilation by 6-8% for high g(m) values, while they underestimated if by up to 70% for low g(m) values. Qualitative differences between the A/C(i) and A/C(C) parameterizations were observed under stressed conditions, when underestimated V(cmax) and overestimated R(d) of A/C(i) parameterizations resulted in excessive mid-day depression of photosynthesis. Comparison with measured diurnal assimilation rates in the Mediterranean sclerophyll species Quercus ilex under drought further supported this bias of A/C(i) parameterizations. While A/C(i) parameterization predicted negative carbon balance at mid-day, actual measurements and simulations with the A/C(C) approach yielded positive carbon gain under these conditions. In addition, overall variation captured by the best A/C(i) parameterization was poor compared with the A/C(C) approach. This analysis strongly suggests that for correct parameterization of daily time-courses of photosynthesis under realistic field conditions, g(m) must be included in photosynthesis models.

Trade-offs between the persistence of foliage and productivity in two Pinus species

Abstract We investigated interspecific variation in leaf lifespan (persistence) and consequent differences in leaf biochemistry, anatomy, morphology, patterns of whole-tree carbon allocation and stand productivity. We tested the hypothesis that a species with short-lived foliage, Pinus radiata D. Don (mean leaf lifespan 2.5 years), grows faster than P. pinaster Ait., a species with more persistent foliage (leaf lifespan 5.6 years), and that the faster growth rate of P. radiata is associated with a greater allocation of nitrogen and carbon to photosynthetic tissues across a range of scales. In fully sunlit foliage, the proportion of leaf N in the major photosynthetic enzyme Rubisco (ribulose-1, 5-bisphosphate carboxylase) was greater in P. radiata than in P. pinaster, and, in mid-canopy foliage, the proportion of leaf N in thylakoid proteins was greater in P. radiata. A lesser proportion of needle cross-sectional area was occupied by structural tissue in P. radiata compared to P. pinaster. Foliage mass in stands of P. radiata was 9.7 t ha–1 compared with 18.2 t ha–1 in P. pinaster while leaf area index of both species was similar at 4.6 m2 m–2, owing to the compensating effect of differences in specific leaf area. Hence trade-offs between persistence and productivity were apparent as interspecific differences in patterns of whole-tree carbon allocation, needle morphology, anatomy and biochemistry. However, these interspecific differences did not translate into differences at the stand scale since rates of biomass accumulation were similar in both species (P. radiata 6.9±0.9 kg year–1 tree–1; P. pinaster 7.4±0.9 kg year–1 tree–1). The similarities in performance at larger scales suggest that leaf area index (and radiation interception) determines growth and productivity.

Phloem sap and leaf δ13C, carbohydrates and amino acid concentrations in Eucalyptus globulus change systematically according to flooding and water deficit treatment

Phloem is a central conduit for the distribution of photoassimilate, nutrients, and signals among plant organs. A revised technique was used to collect phloem sap from small woody plants in order to assess changes in composition induced by water deficit and flooding. Bled phloem sap δ13C and sugar concentrations were compared to δ13C of bulk material, soluble carbon extracts, and the neutral sugar fraction from leaves. Amino acid composition and inorganic ions of the phloem sap was also analysed. Quantitative, systematic changes were detected in phloem sap composition and δ13C in response to altered water availability. Phloem sap δ13C was more sensitive to changes of water availability than the δ13C of bulk leaf, the soluble carbon fraction, and the neutral soluble fraction of leaves. Changes in water availability also resulted in significant changes in phloem sugar (sucrose and raffinose), inorganic nutrient (potassium), and amino acid (phenylalanine) concentrations with important implications for the maintenance of phloem function and biomass partitioning. The differences in carbohydrate and amino acid composition as well as the δ13C in the phloem, along with a new model system for phloem research, offer an improved understanding of the phloem-mediated signal, nutrient, and photoassimilate transduction in relation to water availability.

Quaternary ammonium compounds can be abundant in some soils and are taken up as intact molecules by plants

Studies of organic nitrogen (N) cycling and uptake by plants have focused on protein amino acids, but the soil solution includes organic N compounds from many other compound classes. The two aims of this study were to characterize the 30-50 most abundant molecules of small (< 250 Da), nonpeptide organic N in the soil solution from six soils, and to determine if two ecologically disparate species (nonmycorrhizal Banksia oblongifolia and mycorrhizal Triticum aestivum) have the ability to take up intact molecules of three quaternary ammonium compounds (betaine, carnitine and acetyl-carnitine). Protein amino acids were dominant components of the pool of small nonpeptide organic N in all soils. The most abundant other compound classes were quaternary ammonium compounds (1-28% of nonpeptide small organic N) and nonprotein amino acids (3-19% of nonpeptide small organic N). B. oblongifolia and T. aestivum took up intact quaternary ammonium compounds from dilute hydroponic solution, while T. aestivum growing in field soil took up intact quaternary ammonium compounds injected into soil. Results of this study show that the pool of organic N in soil is more diverse and plants have an even broader palate than is suggested by most of the literature on organic N.