Charlotte Marchand

Culture-Dependent and -Independent Methods Capture Different Microbial Community Fractions in Hydrocarbon-Contaminated Soils.

Bioremediation is a cost-effective and sustainable approach for treating polluted soils, but our ability to improve on current bioremediation strategies depends on our ability to isolate microorganisms from these soils. Although culturing is widely used in bioremediation research and applications, it is unknown whether the composition of cultured isolates closely mirrors the indigenous microbial community from contaminated soils. To assess this, we paired culture-independent (454-pyrosequencing of total soil DNA) with culture-dependent (isolation using seven different growth media) techniques to analyse the bacterial and fungal communities from hydrocarbon-contaminated soils. Although bacterial and fungal rarefaction curves were saturated for both methods, only 2.4% and 8.2% of the bacterial and fungal OTUs, respectively, were shared between datasets. Isolated taxa increased the total recovered species richness by only 2% for bacteria and 5% for fungi. Interestingly, none of the bacteria that we isolated were representative of the major bacterial OTUs recovered by 454-pyrosequencing. Isolation of fungi was moderately more effective at capturing the dominant OTUs observed by culture-independent analysis, as 3 of 31 cultured fungal strains ranked among the 20 most abundant fungal OTUs in the 454-pyrosequencing dataset. This study is one of the most comprehensive comparisons of microbial communities from hydrocarbon-contaminated soils using both isolation and high-throughput sequencing methods.

Characterisation of excavated fine fraction and waste composition from a Swedish landfill

The present research studies the characterisation and the physico-chemical properties of an excavated fine fraction (<10 mm) from a Swedish landfill, the Högbytorp. The results showed that the fine fraction represents 38% by mass of the total excavated wastes and it contains mainly soil-type materials and minerals. Higher concentrations of zinc, copper, barium and chromium were found with concentrations higher than the Swedish Environmental Protection Agency (EPA) for contaminated soil. The found moisture and organic contents of the fine fraction were 23.5% and 16.6%, respectively. The analysed calorific value (1.7 MJ kg−1), the potential of CH4 (4.74 m3 t−1 dry matter) and Total Organic Carbon (TOC) (5.6%) were low and offer low potential of energy. Sieving the fine fraction further showed that 80% was smaller than 2 mm. The fine represents a major fraction at any landfill (40%–70%), therefore, characterising the properties of this fraction is essential to find the potential of reusing/recycling or safely redisposing.

Effect of Medicago sativa L. and compost on organic and inorganic pollutant removal from a mixed contaminated soil and risk assessment using ecotoxicological tests

ABSTRACT Several Gentle Remediation Options (GRO), e.g., plant-based options (phytoremediation), singly and combined with soil amendments, can be simultaneously efficient for degrading organic pollutants and either stabilizing or extracting trace elements (TEs). Here, a 5-month greenhouse trial was performed to test the efficiency of Medicago sativa L., singly and combined with a compost addition (30% w/w), to treat soils contaminated by petroleum hydrocarbons (PHC), Co and Pb collected at an auto scrap yard. After 5 months, total soil Pb significantly decreased in the compost-amended soil planted with M. sativa, but not total soil Co. Compost incorporation into the soil promoted PHC degradation, M. sativa growth and survival, and shoot Pb concentrations [3.8 mg kg−1 dry weight (DW)]. Residual risk assessment after the phytoremediation trial showed a positive effect of compost amendment on plant growth and earthworm development. The O2 uptake by soil microorganisms was lower in the compost-amended soil, suggesting a decrease in microbial activity. This study underlined the benefits of the phytoremediation option based on M. sativa cultivation and compost amendment for remediating PHC- and Pb-contaminated soils.

Pilot scale aided-phytoremediation of a co-contaminated soil

A pilot scale experiment was conducted to investigate the aided-phytoextraction of metals and the aided-phytodegradation of petroleum hydrocarbons (PHC) in a co-contaminated soil. First, this soil was amended with compost (10% w/w) and assembled into piles (Unp-10%C). Then, a phyto-cap of Medicago sativa L. either in monoculture (MS-10%C) or co-cropped with Helianthus annuus L. as companion planting (MSHA-10%C) was sown on the topsoil. Physico-chemical parameters and contaminants in the soil and its leachates were measured at the beginning and the end of the first growth season (after five months). In parallel, residual soil ecotoxicity was assessed using the plant species Lepidium sativum L. and the earthworm Eisenia fetida Savigny, 1826, while the leachate ecotoxicity was assessed using Lemna minor L. After 5months, PH C10-C40, PAH-L, PAH-M PAH-H, Pb and Cu concentrations in the MS-10%C soil were significantly reduced as compared to the Unp-10%C soil. Metal uptake by alfalfa was low but their translocation to shoots was high for Mn, Cr, Co and Zn (transfer factor (TF) >1), except for Cu and Pb. Alfalfa in monoculture reduced electrical conductivity, total organic C and Cu concentration in the leachate while pH and dissolved oxygen increased. Alfalfa co-planting with sunflower did not affect the extraction of inorganic contaminants from the soil, the PAH (M and H) degradation and was less efficient for PH C10-C40 and PAH-L as compared to alfalfa monoculture. The co-planting reduced shoot and root Pb concentrations. The residual soil ecotoxicity after 5months showed a positive effect of co-planting on L. sativum shoot dry weight (DW) yield. However, high contaminant concentrations in soil and leachate still inhibited the L. sativum root DW yield, earthworm development, and L. minor growth rate.

Assessing toxicity of metal contaminated soil from glassworks sites with a battery of biotests

The present study addresses toxicological properties of metal contaminated soils, using glassworks sites in south-eastern Sweden as study objects. Soil from five selected glassworks sites as well as from nearby reference areas were analysed for total and water-soluble metal concentrations and general geochemical parameters. A battery of biotests was then applied to assess the toxicity of the glassworks soil environments: a test of phytotoxicity with garden cress (Lepidium sativum); the BioTox™ test for toxicity to bacteria using Vibrio fischeri; and analyses of abundancies and biomass of nematodes and enchytraeids. The glassworks- and reference areas were comparable with respect to pH and the content of organic matter and nutrients (C, N, P), but total metal concentrations (Pb, As, Ba, Cd and Zn) were significantly higher at the former sites. Higher metal concentrations in the water-soluble fraction were also observed, even though these concentrations were low compared to the total ones. Nevertheless, toxicity of the glassworks soils was not detected by the two ex situ tests; inhibition of light emission by V. fischeri could not be seen, nor was an effect seen on the growth of L. sativum. A decrease in enchytraeid and nematode abundance and biomass was, however, observed for the landfill soils as compared to reference soils, implying in situ toxicity to soil-inhabiting organisms. The confirmation of in situ bioavailability and negative effects motivates additional studies of the risk posed to humans of the glassworks villages.