Christian A. Wyenandt

Basil Downy Mildew (Peronospora belbahrii): Discoveries and Challenges Relative to Its Control

Basil (Ocimum spp.) is one of the most economically important and widely grown herbs in the world. Basil downy mildew, caused by Peronospora belbahrii, has become an important disease in sweet basil (O. basilicum) production worldwide in the past decade. Global sweet basil production is at significant risk to basil downy mildew because of the lack of genetic resistance and the ability of the pathogen to be distributed on infested seed. Controlling the disease is challenging and consequently many crops have been lost. In the past few years, plant breeding efforts have been made to identify germplasm that can be used to introduce downy mildew resistance genes into commercial sweet basils while ensuring that resistant plants have the correct phenotype, aroma, and tastes needed for market acceptability. Fungicide efficacy studies have been conducted to evaluate current and newly developed conventional and organic fungicides for its management with limited success. This review explores the current efforts and progress being made in understanding basil downy mildew and its control.

Evaluation of Fungicides for the Control of Peronospora belbahrii on Sweet Basil in New Jersey

Basil downy mildew (BDM), caused by the fungus-like oomycete pathogen Peronospora belbahrii, has become a destructive disease of sweet basil (Ocimum basilicum). Without proper management, BDM can cause complete crop loss. Currently, there are no commercially available sweet basil cultivars with genetic resistance to BDM. Because BDM is a relatively new disease of basil in the United States, there are few currently registered conventional or organic fungicides labeled for its control. Fungicide efficacy trials were conducted in 2010 and 2011 at Rutgers Agricultural Research and Extension Center in Bridgeton, NJ. During both years, seven biological fungicide treatments were field evaluated, including hydrogen dioxide; extract of Reynoutria sachalinensis; Bacillus pumilus strain QST 2808; a mixture of rosemary oil, clove oil, and thyme oil; mono- and dipotassium salts of phosphorous acid; sesame oil; copper hydroxide; and a combination of sesame oil + cupric hydroxide. Six conventional fungicides evaluated included mandipropamid, fluopicolide, propamocarb hydrochloride, cyazofamid, azoxystrobin, and fenamidone. In both years, mono- and dipotassium salts of phosphorous acid provided the best control. Moderate disease suppression was provided by mandipropamid, cyazofamid, and fluopicolide compared with the control in 2010 and mandipropamid, cyazofamid, and copper hydroxide compared with the control in 2011.

A first linkage map and downy mildew resistance QTL discovery for sweet basil (Ocimum basilicum) facilitated by double digestion restriction site associated DNA sequencing (ddRADseq)

Limited understanding of sweet basil (Ocimum basilicum L.) genetics and genome structure has reduced efficiency of breeding strategies. This is evidenced by the rapid, worldwide dissemination of basil downy mildew (Peronospora belbahrii) in the absence of resistant cultivars. In an effort to improve available genetic resources, expressed sequence tag simple sequence repeat (EST-SSR) and single nucleotide polymorphism (SNP) markers were developed and used to genotype the MRI x SB22 F2 mapping population, which segregates for response to downy mildew. SNP markers were generated from genomic sequences derived from double digestion restriction site associated DNA sequencing (ddRADseq). Disomic segregation was observed in both SNP and EST-SSR markers providing evidence of an O. basilicum allotetraploid genome structure and allowing for subsequent analysis of the mapping population as a diploid intercross. A dense linkage map was constructed using 42 EST-SSR and 1,847 SNP markers spanning 3,030.9 cM. Multiple quantitative trait loci (QTL) model (MQM) analysis identified three QTL that explained 37–55% of phenotypic variance associated with downy mildew response across three environments. A single major QTL, dm11.1 explained 21–28% of phenotypic variance and demonstrated dominant gene action. Two minor QTL dm9.1 and dm14.1 explained 5–16% and 4–18% of phenotypic variance, respectively. Evidence is provided for an additive effect between the two minor QTL and the major QTL dm11.1 increasing downy mildew susceptibility. Results indicate that ddRADseq-facilitated SNP and SSR marker genotyping is an effective approach for mapping the sweet basil genome.

Residual Effects of Leaf Mulch on Sweet Corn and Rye

When municipal shade tree leaves (MCST-leaf) are used as mulch the residues impact soil fertility for crops in the rotation. Pumpkin (Cucurbita pepo L.), grown near Pittstown, New Jersey, using leaf mulch, was followed in the next year by sweet corn (Zea mays L.) and by a fall-seeded rye (Secale cereale L.) cover crop. A 15 cm layer of MCST-leaf mulch adds an estimated 448 kg ha−1 of N organically bound within 45 Mg ha−1 of leaf dry matter. Because of the high C/N ratio, little of this N becomes available in the first growing season as was apparent from the N immobilization and N deficiency temporarily observed when the land was initially cropped to pumpkin. Sweet corn ear size was increased on amended soil compared to unamended soil. Crop responses with both sweet corn and rye indicated that significant amounts of nitrogen became plant available from leaf mulch decomposition. Leaf mulch improves soil fertility for several years after incorporation but in ways not apparent through soil nitrate testing. Besides enhanced N nutrition, sweet corn ear size on MCST-leaf amended soil may be related to other improvements in soil quality such as increased water holding capacity.