Christoph Kolano

Watching hydrogen-bond dynamics in a β-turn by transient two-dimensional infrared spectroscopy

X-ray crystallography and nuclear magnetic resonance measurements provide us with atomically resolved structures of an ever-growing number of biomolecules. These static structural snapshots are important to our understanding of biomolecular function, but real biomolecules are dynamic entities that often exploit conformational changes and transient molecular interactions to perform their tasks. Nuclear magnetic resonance methods can follow such structural changes, but only on millisecond timescales under non-equilibrium conditions. Time-resolved X-ray crystallography has recently been used to monitor the photodissociation of CO from myoglobin on a subnanosecond timescale, yet remains challenging to apply more widely. In contrast, two-dimensional infrared spectroscopy, which maps vibrational coupling between molecular groups and hence their relative positions and orientations, is now routinely used to study equilibrium processes on picosecond timescales. Here we show that the extension of this method into the non-equilibrium regime allows us to observe in real time in a short peptide the weakening of an intramolecular hydrogen bond and concomitant opening of a β-turn. We find that the rate of this process is two orders of magnitude faster than the ‘folding speed limit’ established for contact formation between protein side chains.

An efficient homogeneous intermolecular rhenium based photocatalytic system for the production of H2

We present an artificial photocatalytic model for photosystem I (PSI) using [ReBr(CO)(3)bipy)] (1) as a photosensitizer, [Co(dmgH)(2)] (2) as a hydrogen evolution reaction catalyst, and triethanolamine as an irreversible reductive quencher. Complex 1 is more robust in the long run, and turnover numbers were more than doubled in the present study as compared to the commonly used photosensitizer [Ru(bipy)(3)](2+). The quantum yield for hydrogen production with 1 was found to be 26 +/- 2% (H produced per absorbed photon). Forward electron transfer between 1(-) and 2 was found to occur at a rate close to diffusion control (k(1) = 2.5 +/- 0.1 x 10(8) M(-1) s(-1)). The rate of hydrogen production exhibited a linear dependence on the photon flux and a quadratic dependence on the total concentration of Co (k(obs) = 3.7 +/- 0.1 M(-1) s(-1)). Therefore, a second-order process in Co(III)-H is proposed. The process showed a complex dependence on [AcOH]. An excess of dimethylglyoxime was systematically added to the system to ensure the complete formation of 2 and reduce the portion of free [Co](solv)(2+), an efficient quencher of the excited state of 1.

A TRIR, TREPR and Computational Study on the Reactivity and Structure of the 2,2,2-Trifluoroethoxycarbonyl Radical†

Abstract The 2,2,2-trifluoroethoxycarbonyl radical, 3b, has been generated by pulsed irradiation of 9-fluorenone oxime 2,2,2-trifluoroethyl oxalate 1b in carbon tetrachloride and acetonitrile solution. It was characterized by time-resolved electron paramagnetic resonance spectroscopy (EPR) and infrared spectroscopy. The radical has a lifetime in the range of microseconds and can be detected within the rise time of our time-resolved equipment before undergoing recombination or reactions with the solvent. No decarbonylation or decarboxylation was observed. In the presence of oxygen, the radical is quenched to yield the 2,2,2-trifluoroethoxycarbonylperoxy radical 4b, which has again a lifetime in the range of several microseconds. Time-resolved electron paramagnetic resonance spectroscopy (TREPR) allowed for the detection of a 1 : 1 : 1 triplet of the fluorene-9-iminyl radical 7 at g = 2.0032 and a 1 : 3 : 3 : 1 quartet with additional hyperfine splitting (HFS) due to proton coupling at g = 2.001 for the trifluoroethoxycarbonyl radical 3b. Calculations indicate that alkoxycarbonyl radicals can exist in conformations that are s-trans or s-cis with respect to the R-O-C(O)·dihedral. A comparison of experimental TREPR spectra with simulations indicates that the s-trans conformer is observed in the case of the ethoxycarbonyl radical, 3a. In the case of the trifluorethoxycarbonyl radical, 3b, however, the additional proton HFS observed shows that it is the s-cis conformer that is formed. As calculations give evidence for a fairly high activation enthalpy for s-cis-s-trans interconversion of alkoxycarbonyl radicals, this discrepancy is likely due to differing conformational preferences of the precursor molecules.