Claudine Dinali Santos Seixas

Ferrugem-asiática da soja no Brasil: passado, presente e futuro

Asian soybean rust, caused by the fungus Phakopsora pachyrhizi , is the most severe disease of the crop and can cause yield losses of up to 90%. The disease was first reported in Brazil in 2001. Epidemics of the disease are common in the country, where the fungus can survive year‑round. Regulatory measures to reduce the inoculum between seasons and avoid late-season soybean have been adopted to manage the disease. Disease control has relied mainly on chemical control, but a lower sensibility of the fungus to fungicides has been reported in Brazil. Major‑resistance genes have been mapped and incorporated into the cultivars. With the reduced efficacy of the fungicides, the adoption of integrated measures to control the disease will be important for the sustainability of the crop. This review presents the main changes in the soybean crop system caused by the introduction of the fungus in Brazil, the current management strategies adopted to avoid losses, and the new trends that, together with biotechnological strategies, can improve management in the future.

First report of Curtobacterium flaccumfaciens pv. flaccumfaciens on soybean in Brazil

Curtobacterium flaccumfaciens pv. flaccumfaciens (Cff) causes bacterial wilt on beans (Phaseolus vulgaris) and bacterial tan spot on soybeans (Glycine max). Cff was detected on beans in Brazil in 1995. Plants of commercial and experimental fields of soybean with typical symptoms of the disease were collected in the State of Parana, Brazil, during the 2011/2012 growing season. The causal agent was identified as Cff by isolation from symptomatic leaves on CNS semi-selective medium, artificial inoculation test and re-isolation in soybean and bean, Gram staining test, solubility in KOH, and by PCR. This is the first report of Cff on soybean in Brazil.

First report of Diaporthe phaseolorum var. caulivora infecting soybean plants in Brazil

In March 2006, diseased soybean plants (Glycine max) were found in the municipalities of Passo Fundo and Coxilha, state of Rio Grande do Sul, Brazil, showing withered, brown leaves and light to reddish-brown discoloration and necrosis (canker) of the lower half of the stem. Cultural characteristics in potato dextrose agar showed identical patterns to those described for Diaporthe phaseolorum varcaulivora (Dpc). The rDNA-ITS sequence data from the Brazilian strain CH 40/06 (GenBank accession number EU622854) were compared to homologous sequences from the NCBI GenBank database, and a high similarity with Dpc strains was verified. A phylogenetic reconstruction was performed to compare EU622854 with other related sequences and grouped with Dpc. This group was highly supported by the bootstrap test (99%). Morphology of the Brazilian specimen was also similar to that described in the literature for Dpc, but the ascospores were slightly narrower than the American original material of Dpc. In field surveys performed in the 2006/07 crop season, Dpc was also found in five additional municipalities in RS.

Fusarium paranaense sp. nov., a member of the Fusarium solani species complex causes root rot on soybean in Brazil.

Isolates of Fusarium obtained from soybean plants showing symptoms of root rot collected in subtropical southern and tropical central Brazil were characterized based on phylogenetic analyses, sexual crossing, morphology, and pathogenicity tests. A novel species within the Fusarium solani species complex (FSSC) causing soybean root rot is formally described herein as Fusarium paranaense. This species can be distinguished from the other soybean root rot pathogens in the FSSC, which are commonly associated with soybean sudden death syndrome (SDS) based on analyses of the combined DNA sequences of translation elongation factor 1-α and the second largest subunit of RNA polymerase II and on interspecies mating compatibility. Bayesian and maximum parsimony phylogenetic analyses showed that isolates of F. paranaense formed a distinct group in clade 3 of the FSSC in contrast to the pathogens currently known to cause SDS, which are in clade 2. Female fertile tester strains were developed that can be used for the identification of this new species in the FSSC based on sexual crosses. All isolates were heterothallic and belonged to a distinct mating population. Fusarium tucumaniae, a known SDS pathogen, was found in the subtropical southern region of the country.

Phylogeny and variability of Colletotrichum truncatum associated with soybean anthracnose in Brazil

Fungal diseases are among the main factors limiting high yields of soybean crop. Colletotrichum isolates from soybean plants with anthracnose symptoms were studied from different regions and time periods in Brazil using molecular, morphological and pathogenic analyses.

Development of Sclerotium rolfsii sclerotia on soybean, corn, and wheat straw, under different soil temperatures and moisture contents.

The objective of this work was to evaluate the effect of moisture and temperature on the development of Sclerotium rolfsii on soybean, corn, and wheat straw. Wheat straw produced the lowest number of sclerotia. Intermediate soil moisture level (70% of field capacity), and temperatures ranging between 25-30oC favored sclerotia development. No sclerotia were formed at temperatures between 30-35oC, on any type of straw.

Morphological and molecular characterization of Diaporthe (anamorph Phomopsis) complex and pathogenicity of Diaporthe aspalathi isolates causing stem canker in soybean

The complex of Diaporthe (asexual morph) species occurring on soybean constitutes an important pathogenic group associated with diseases such as pod and stem blight, seed decay and stem canker. Stem canker, caused by Diaporthe aspalathi, has been reported as the most aggressive form of canker and its occurrence has limited soybean crop productivity in the southern United States. The main form of pathogen control is the use of stem canker resistant soybean varieties. In this study, strains of Diaporthe and Phomopsis were isolated from stem and seeds of soybean in different locations in South America during the years 1989–2014. Genomic DNA from 26 isolates were analyzed by PCR-restriction fragment length polymorphism (RFLP) and Amplified Fragment Length Polymorphism (AFLP) techniques, and sequencing of internal transcribed spacer (ITS) regions of ribosomal DNA. The molecular analysis of ITS sequences by alignment with those of ex-type strains deposited in GenBank and morphological characteristics allowed the identification of Phomopsis longicolla, D. phaseolorum var. sojae, D. caulivora and D. aspalathi. An analysis of the pathogenicity of 13 isolates of D. aspalathi inoculated in soybean genotypes carrying different resistance genes to stem canker (Rdm1, Rdm2, Rdm3, Rdm4, Rdm5 and Rdm?) enabled us to identify the occurrence of at least three races of D. aspalathi occurring in Brazil. Among the isolates identified as D. aspalathi, both molecular and phenotypic analyses showed clustering depending on the date of collection and pathogenicity, which revealed the existence of variability of the pathogen.