Conchi Sánchez

Application of biotechnological tools to Quercus improvement

The genus Quercus, which belongs to the family Fagaceae, is native to the northern hemisphere and includes deciduous and evergreen species. The trees of the different species are very important from both economic and ecological perspectives. Application of new technological approaches (which span the fields of plant developmental biology, genetic transformation, conservation of elite germplasm and discovery of genes associated with complex multigenic traits) to these long-rotation hardwoods may be of interest for accelerating tree improvement programs. This review provides a summary of the advances made in the application of biotechnological tools to specific oak species. Significant progress has been made in the area of clonal propagation via organogenesis and somatic embryogenesis (SE). Standardized procedures have been developed for micropropagating the most important European (Q. robur, Q. petarea, Q. suber) and American (Q. alba, Q. bicolor, Q. rubra) oaks by axillary shoot growth. Although regenerated plantlets are grown in experimental trials, large-scale propagation of oak species has not been carried out. The induction of SE in oaks from juvenile explants is generally not problematic, although the use of explants other than zygotic embryos is much less efficient. During the last decade, enormous advances have been made in inducing SE from selected adult trees, mainly specimens of pedunculate oak (Q. robur) and cork oak (Q. suber). Advances in the understanding of the maturation and germination steps are required for better use of embryogenic process in clonal forestry. Quercus species are late-maturing and late-flowering, exhibit irregular seed set, and produce seeds that are recalcitrant to storage by conventional procedures. Vitrification-based cryopreservation techniques were used successfully in somatic embryos of pedunculate oak and cork oak, and an applied genbank of cork oak selected genotypes is now under development. The feasibility of genetic transformation of pedunculate oak and cork oak somatic embryos by means of co-culture techniques with several strains of Agrobacterium tumefaciens has also been demonstrated. To date, most research on the genomics of Quercus species has concerned population genetics. Approaches using functional genomics to examine the molecular and cellular mechanisms that control organogenesis and or somatic embryogenesis are still scarce, and efforts on the isolation and characterization of genes related to other specific traits should be intensified in the near future, as this would help improve the practical application of clonal forestry in recalcitrant species such as oaks.

CRYOPRESERVATION OF CHESTNUT BY VITRIFICATION OF IN VITRO-GROWN SHOOT TIPS

SummaryPlants of European chestnut (Castanea sativa) have been consistently recovered from cryopreserved in vitro-grown shoot apices by using the vitrification procedure. Factors found to influence the success of cryopreservation include the source of the shoot tips (terminal buds or axillary buds), their size, the duration of exposure to the cryoprotectant solution, and the composition of the post-cryostorage recovery medium. The most efficient protocol for shoot regrowth employed 0.5–1.0 mm shoot tips isolated from 1 cm-long terminal buds that had been excised from 3–5-wk shoot cultures and cold hardened at 4°C for 2 wk. The isolated shoot tips were precultured for 2d at 4°C on solidified Gresshoff and Doy medium (GD) supplemented with 0.2M sucrose, and were then treated for 20 min at room temperature with a loading solution (2M glycerol+0.4M sucrose) and for 120 min at 0°C with a modified PVS2 solution before rapid immersion in liquid nitrogen (LN). After 1 d in LN, rapid rewarming and unloading in 1.2M sucrose solution for 20 min, the shoot tips were plated on recovery medium consisting of GD supplemented with 2.2 μM benzyladenine, 2.9 μM 3-indoleacetic acid, and 0.9 μM zeatin. This protocol achieved 38–54% shoot recovery rates among five chestnut clones (three of juvenile origin and two of mature origin), and in all cases plant regeneration was also obtained.

CsSCL1 is differentially regulated upon maturation in chestnut microshoots and is specifically expressed in rooting-competent cells

The Castanea sativa SCL1 gene (CsSCL1) has previously been shown to be induced by auxin during adventitious root (AR) formation in rooting-competent microshoots. However, its expression has not previously been analyzed in rooting-incompetent shoots. This study focuses on the regulation of CsSCL1 during maturation and the role of the gene in the formation of AR. The expression of CsSCL1 in rooting-incompetent microshoots and other tissues was investigated by quantitative reverse transcriptase--polymerase chain reaction. The analysis was complemented by in situ hybridization of the basal segments of rooting-competent and --incompetent microshoots during AR induction, as well as in AR and lateral roots. It was found that CsSCL1 is upregulated by auxin in a cell-type- and phase-dependent manner during the induction of AR. In root-forming shoots, CsSCL1 mRNA was specifically located in the cambial zone and derivative cells, which are rooting-competent cells, whereas in rooting-incompetent shoots the hybridization signal was more diffuse and evenly distributed through the phloem and parenchyma. CsSCL1 expression was also detected in lateral roots and axillary buds. The different CsSCL1 expression patterns in rooting-competent and -incompetent microshoots, together with the specific location of transcripts in cell types involved in root meristem initiation and in the root primordia of AR and lateral roots, indicate an important role for the gene in determining whether certain cells will enter the root differentiation pathway and its involvement in meristem maintenance.

The GRAS gene family in pine: transcript expression patterns associated with the maturation-related decline of competence to form adventitious roots

BackgroundAdventitious rooting is an organogenic process by which roots are induced from differentiated cells other than those specified to develop roots. In forest tree species, age and maturation are barriers to adventitious root formation by stem cuttings. The mechanisms behind the respecification of fully differentiated progenitor cells, which underlies adventitious root formation, are unknown.ResultsHere, the GRAS gene family in pine is characterized and the expression of a subset of these genes during adventitious rooting is reported. Comparative analyses of protein structures showed that pine GRAS members are conserved compared with their relatives in angiosperms. Relatively high GRAS mRNA levels were measured in non-differentiated proliferating embryogenic cultures and during embryo development. The mRNA levels of putative GRAS family transcription factors, including Pinus radiata’s SCARECROW (SCR), PrSCR, and SCARECROW-LIKE (SCL) 6, PrSCL6, were significantly reduced or non-existent in adult tissues that no longer had the capacity to form adventitious roots, but were maintained or induced after the reprogramming of adult cells in rooting-competent tissues. A subset of genes, SHORT-ROOT (PrSHR), PrSCL1, PrSCL2, PrSCL10 and PrSCL12, was also expressed in an auxin-, age- or developmental-dependent manner during adventitious root formation.ConclusionsThe GRAS family of pine has been characterized by analyzing protein structures, phylogenetic relationships, conserved motifs and gene expression patterns. Individual genes within each group have acquired different and specialized functions, some of which could be related to the competence and reprogramming of adult cells to form adventitious roots.

Public Knowledge and Perceptions of Safety Issues Towards the Use of Genetically Modified Forest Trees: A Cross-Country Pilot Survey

Information on public awareness and acceptance issues regarding the use of Genetically Modified (GM) trees in forestry is lacking, although such information is available for GM organisms in agriculture. This is mainly due to the fact that in Europe there is no authorization for commercial planting of GM forest trees. To address this issue and within the frame of a European COST Action on the Biosafety of Transgenic Forest Trees (FP0905), a KAP (Knowledge Attitude Practice ) cross-country pilot survey was conducted among university students of different disciplines as sampling subjects. In total, 1920 completed questionnaires from 16 European and non-European countries were evaluated. The results provided novel cross-country insights into the level of public knowledge, particularly of young people and their perceptions on safety issues related to the use of GM forest trees , as well as on their attitude towards the acceptance of GM forest trees cultivation. The majority of the respondents, which was more than 60 % in all countries, approved the use of GM forest trees for commercial plantations , excluding natural forests. The majority of respondents also appeared willing to buy products from such plantations, such as wood products, pulp and paper. Over 80 % of the respondents from all countries were in favour of using labelling to identify products of GM origin, while more than 80 % of those would prefer that this labelling be legally mandatory. The top three benefits that were rated as very important in all countries involved the potential lower demand of the GM forest plantations for pesticides, the potential of GM forest trees for restoration of contaminated soils and the potential higher GM forest tree productivity. The top three GM forest tree risks that were perceived as serious hazards in all countries included the potential loss of biodiversity due to gene flow between transgenic and wild trees, the adverse effects of biotrophic processes on host ecosystems and the cultural adaptation to changing biodiversity conditions due to transgene escape. Overall, lack of knowledge regarding the potential benefits and potential risks of the cultivation of GM forest trees was observed in almost all surveyed countries.

Soil Effects of Genetically Modified Trees (GMTs)

The activity of the root and the dead material from genetically modified trees (GMTs) might potentially alter soil features and turn into an impact on soil ecosystem. Several greenhouse and field studies of forest transgenic trees including poplars , silver birch , white spruce , American chestnut and Eucalyptus engineered for lignin biosynthesis and other relevant traits have addressed a potential impact on the receiving environment. Most of the available studies have considered effects on mycorrhizal fungi because of their intimate relationship with trees, and their support for the plants’ acquisition of water and nutrients. Futhermore, changes in fungal community may also affect other fungal or bacterial communities and be thus indicative of more complex changes to soil ecosystem. To the knowledge of the authors, significant changes in bacterial, fungal community or mycorrhizal plant colonization have not been reported in peer-review of GMTs to date. However, some studies reported effects on indicators species. Similar observations have been reported in bioremediation studies with GMTs. The lack of baseline data on the diversity and natural variability of the soil microbiota, including fungi, in silvicultural practices limits the evaluation of the ecological relevance of the observed changes. Some studies suggest that plant stage, type of soil and other environmental factors may have a greater influence on the soil microbiota , as seen with indicator species , than the effect of GMTs.

Expression of the QrCPE gene is associated with the induction and development of oak somatic embryos

Somatic embryogenesis is a powerful tool for plant regeneration and also provides a suitable material for investigating the molecular events that control the induction and development of somatic embryos. This study focuses on expression analysis of the QrCPE gene (which encodes a glycine-rich protein) during the initiation of oak somatic embryos from leaf explants and also during the histodifferentiation of somatic embryos. Northern blot and in situ hybridization were used to determine the specific localisation of QrCPE mRNA. The results showed that the QrCPE gene is developmentally regulated during the histodifferentiation of somatic embryos and that its expression is tissue- and genotype-dependent. QrCPE was strongly expressed in embryogenic cell aggregates and in embryogenic nodular structures originated in leaf explants as well as in the protodermis of somatic embryos from which new embryos are generated by secondary embryogenesis. This suggests a role for the gene during the induction of somatic embryos and in the maintenance of embryogenic competence. The QrCPE gene was highly expressed in actively dividing cells during embryo development, suggesting that it participates in embryo histodifferentiation. The localised expression in the root cap initial cells of cotyledonary somatic embryos and in the root cap of somatic seedlings also suggests that the gene may be involved in the fate of root cap cells.