D.M. De Costa

Control of rice sheath blight by phyllosphere epiphytic microbial antagonists

Epiphytic microorganisms on the phyllosphere of traditional and high-yielding rice varieties were isolated from different agroecological zones of Sri Lanka and screened for theirin vitro andin vivo antagonism againstRhizoctonia solani Kühn AG-1 1A, the sheath blight pathogen of rice. Among a total of 196 bacterial and 91 fungal isolates, 12 bacterial and two fungal isolates which showed more than 50% growth inhibition ofR. solani were tested for theirin vivo antagonism. Among the 14 antagonists tested, six bacterial and one fungal isolate substantially reduced the incidence of sheath blight (by more than 82%) and severity (by more than 92%) of the rice varieties BG94-1 and IR8 grown in a pot experiment under open field conditions. Using five antagonists that showed the bestin vitro antagonism, a pot experiment was conducted to determine whether the presence of indigenous microflora on the rice sheath had any effect on the effectiveness of antagonism. Three isolates (B4, GbB5 and HMWB4) controlled sheath blight incidence and severity equally well in the presence and absence of indigenous microflora. Two isolates (BG352B1 and BG300B1) were more effective when they were introduced into the rice sheath without indigenous microflora. Among the effective antagonists determined by the pot experiment, isolates B4, B16, BG94-1B5, GbB5, HMWB4 and BG379-F2 were tested under field conditions for two consecutive growing seasons. Under field conditions, severity of rice sheath blight was significantly reduced by the application of all the tested antagonists as a spray on rice sheath at a concentration of 108 cfu ml−1, starting 3 days after the development of symptoms and continuing for three applications at 10-day intervals. Antagonistic performances were consistent in the two seasons under field conditions andB. megatarium A (isolate B16) andAspergillus niger (isolate BG379-F2) performed as the most effective antagonists in both seasons. When disease severity was quantified as percentage sheath area covered by the disease lesions, the respective reductions in disease severity were greater than 50% and 61% byB. megaterium A (isolate B16) andAspergillus niger (isolate BG379-F2), respectively, in both seasons.

Development of a spore-based formulation of microbial pesticides for control of rice sheath blight

Abstract An effective formulated biopesticide for controlling sheath blight in rice was developed using three microbial antagonists (Bacillus megaterium, Bacillus subtilis and Aspergillus niger) isolated from the rice sheath. The efficiency of spore-based formulations of the above microbial antagonists was investigated and their effectiveness in controlling sheath blight was demonstrated. Application of talc-based formulations of individual antagonists and mixtures of the three antagonists as spray treatments or soil applications were effective in reducing the incidence by up to 45% at 27 days after inoculation of the pathogen of sheath blight and increased rice yield. The use of spores of a fungal antagonist (A. niger), in comparison to commonly used bacterial antagonists, is a novel feature of the present study. Optimum sporulation conditions of the antagonists for preparation of spore-based formulations and their commercially desirable features such as the ability to maintain spore viability in storage were also determined. Culturing in the synthetic replacement sporulation medium (SRSM-2) for 72 hours was the most effective for sporulation of the two bacterial antagonists while culturing in potato dextrose broth (PDB) for 7 days was the most effective for sporulation of the fungal antagonist. It was demonstrated that talc-based formulations of all antagonists, either in refrigerated storage (4°C) or at room temperature (28±2°C), were able to maintain greater spore viability over a longer period (>6 months) than spore suspensions. In view of the relatively shorter life spans of formulations based on vegetative cells, spore-based formulations have a distinct advantage in achieving longer-lasting control, especially under harsh field conditions.

Structural and Functional Analysis of a Putative Gene Cluster for Palatinose Transport on the Linear Chromosome of Agrobacterium tumefaciens MAFF301001

We identified a putative pal gene cluster (palR, palE, palF, palG, palK, palA, and palB) in the plant-tumorigenic bacterium Agrobacterium tumefaciens MAFF301001; by sequencing analyses, this cluster was found to be involved in palatinose transport, and its functional importance was revealed by mutational analyses. The pal gene products were highly homologous to those of putative trehalose/maltose ABC-type transport systems but were not essential to bacterial growth on trehalose. Insertion mutations in the palK and palE genes showed the necessity of these genes for bacterial growth and chemotaxis with palatinose as the carbon source, but no inhibition of tumorigenesis was observed. Growth on trehalose and maltose was not influenced by the mutations.

Effects of changing rainfall and soil temperature on population density of Pratylenchus loosi in tea lands at different elevations

The climatic, elevational and edaphic factors are the major abiotic determinants of survival and reproductive behavior of plant pathogenic nematodes and thus responsible for their occurrence, population levels and severity of symptom development. Present study attempted to determine relationship between rainfall, soil temperature and soil moisture on soil and root population densities of Pratylenchus loosi, the key nematode pest of tea in six different elevation regimes in Sri Lanka. Rainfall, soil temperature and soil moisture of six locations were recorded by standard methods over 18 months. P. loosi populations in soil and root samples obtained from the same locations were also monitored using standard methods. The fluctuating nematode population density was correlated with rainfall, soil temperature and soil moisture. There was a positive correlation of P. loosi population density with mean rainfall and negative correlation with soil temperature and soil moisture content in majority of the tested locations. Results also revealed an increase in mean soil temperature above the optimal range for development of P. loosi and a remarkable change in soil temperature range of 18-24 0 C. However, there were exceptions in some locations indicating that factors other than temperature have influenced nematode population. Nevertheless, presence of P. loosi at increased soil temperature ranges beyond the acceptable range was evident in certain locations making disease expressions and damage to tea. Therefore, further investigations are warranted on the presence of new biotypes and the influence of other factors for development of P. loosi population in view of developing specific management strategies.