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Featured researches published by Dan Du.


Journal of Natural Products | 2010

Thiodiketopiperazines Produced by the Endophytic Fungus Epicoccum nigrum

Jia-Ming Wang; Guang-Zhi Ding; Lei Fang; Jungui Dai; Shi-Shan Yu; Ying‐Hong Wang; Xiaoguang Chen; Shuang-Gang Ma; Jing Qu; Song Xu; Dan Du

Thirteen new thiodiketopiperazines, epicoccin I (1), ent-epicoccin G (2), and epicoccins J-T (3-13), together with six known diketopiperazines (14-19), have been isolated from the endophytic fungus Epicoccum nigrum. The structures of 1, 2, and 10 were confirmed by X-ray crystallography, and the absolute configurations of 2, 4, 6, and 8 were assigned using Moshers method. Compounds 2, 6, 12, and 17 showed potent activities in vitro against the release of beta-glucuronidase in rat polymorphonuclear leukocytes induced by platelet-activating factor, with IC(50) values of 3.07, 4.16, 4.95, and 1.98 microM, respectively. None of the 19 compounds exhibited detectable cytotoxic activities toward six tumor cell lines (A549, Be-l7402, BGC-823, HCT-8, HCT-116, and A2780) in the MTT assay.


Rapid Communications in Mass Spectrometry | 2009

Identification of new trace triterpenoid saponins from the roots of Panax notoginseng by high-performance liquid chromatography coupled with electrospray ionization tandem mass spectrometry

Yuanyan Liu; Jianbei Li; Jiuming He; Zeper Abliz; Jing Qu; Shi-Shan Yu; Shuang-Gang Ma; Jing Liu; Dan Du

Triterpenoid saponins are the major bioactive constituents of Panax notoginseng. In the study reported here, the fragmentation behavior of triterpenoid saponins from P. notoginseng was investigated by electrospray ionization tandem mass spectrometry (ESI-MS(n))and high-performance liquid chromatography coupled with electrospray ionization tandem mass spectrometry (HPLC/ESI-MS(n)). Analyses revealed that product ions from glycosidic and cross-ring cleavages can give a wealth of structural information regarding the nature of the aglycone, sugar types, the sequence and linkage information of sugar units. It is noted that different glycosylation positions remarkably influenced the fragmentation behaviors, which could assist in the differentiation of saponin analogues. To rationalize this characteristic, the collision energy required for various glycosidic cleavages was investigated. According to the summarized fragmentation rules, identification of triterpenoid saponins from the roots of P. notoginseng could be fulfilled, even when reference standards were unavailable. Furthermore, minor and trace constituents were enriched and detected by eliminating the major constituents in one of the saponin fractions. As a result, a total of 151 saponins, including 56 new trace ones, were identified or tentatively characterized from saponin fractions based on their retention times, HPLC/HRMS, HPLC/ESI-MS(n) fragmentation behaviors and comparison with literature data.


Journal of Natural Products | 2010

Neolignans and glycosides from the stem bark of Illicium difengpi.

Lei Fang; Dan Du; Guang-Zhi Ding; Yi-Kang Si; Shi-Shan Yu; Yang Liu; Wen-Jie Wang; Shuang-Gang Ma; Song Xu; Jing Qu; Jia-Ming Wang; Yu-Xi Liu

Five new neolignans (1-4 and 9), two pairs of neolignan epimers (5-8), and two new aromatic glycosides (10 and 11) have been isolated from the stem bark of Illicium difengpi. Their structures were determined by spectroscopic methods, including 1D and 2D NMR, HRESIMS, CD experiments, and chemical methods. The absolute configurations of the 3,4-diol moiety in 1 and 1,3-diol moiety in 2 were confirmed by Snatzkes method, observing the induced circular dichroism after addition of dimolybdenum tetraacetate in DMSO. Compounds 3, 4, and 11 exhibited moderate anti-inflammatory activities with IC(50) values ranging from 1.62 to 24.4 microM, while compound 3 displayed antioxidant activity with an IC(50) value of 42.3 microM.


Journal of Natural Products | 2008

Targeted Isolation and Structure Elucidation of Stilbene Glycosides from the Bark of Lysidice brevicalyx Wei Guided by Biological and Chemical Screening

Youcai Hu; Shuang-Gang Ma; Jianbei Li; Shi-Shan Yu; Jing Qu; Jing Liu; Dan Du

An efficient procedure based on biological and chemical screening has been performed to investigate the antioxidant constituents of the bark of Lysidice brevicalyx Wei. The procedure allowed the rapid identification of known compounds and tentative characterization of unknown compounds by online LC/UV/ESIMS(n) analyses of the antioxidant fraction. Targeted isolation of the unknown compounds has led to the discovery of seven new stilbene glycosides, named lysidisides L-R (1-7), together with a known stilbene glycoside, (E)-resveratrol 3-O-rutinoside (8). The structures of these compounds were further determined on the basis of spectroscopic and chemical evidence. The antioxidant activities of compounds 1-8 and two related compounds, (E)-polydatin (9) and lysidiside E (11), were evaluated. The known compound (E)-polydatin (9) showed antioxidant activity at concentrations of 10(-4) and 10(-5) mol/L.


Journal of Chromatography B | 2010

Identification of cardiac glycosides in fractions from Periploca forrestii by high-performance liquid chromatography/diode-array detection/electrospray ionization multi-stage tandem mass spectrometry and liquid chromatography/nuclear magnetic resonance

Yong Li; Xian-Fu Wu; Jianbei Li; Yinghong Wang; Shi-Shan Yu; Haining Lv; Jing Qu; Zeper Abliz; Jing Liu; Yuanyan Liu; Dan Du

Cardiac glycosides are a class of naturally occurring compounds that are characterized by some interesting biological activities and are widely distributed in the plant kingdom and can also be found in some animals. There is an interest in the chemical characterization of these molecules due to their toxicity and their use in medicines. In the study reported here, a combination of electrospray ionization tandem mass spectrometry with high-performance liquid chromatography equipped with diode-array detector (HPLC-DAD/ESI-MS(n)), and hyphenation to both liquid chromatography and nuclear magnetic resonance spectroscopy (HPLC/NMR) were utilized for the on-line analyses of cardiac glycosides from Periploca forrestii. The fragmentation patterns and (1)H NMR spectra of nine isolated cardiac glycosides were investigated; their fragmentation rules and (1)H NMR spectral characteristics were summarized and applied to the structural identification of similar constituents in fractions from P. forrestii. As a result, a total of nine trace cardiac glycosides were tentatively determined by analyses of accurate molecular masses, representative fragment ions and characteristic (1)H NMR signals provided by HPLC/high-resolution mass spectrometry (HRMS), HPLC-DAD/ESI-MS(n) and HPLC/(1)H NMR experiments, respectively. Of these, eight (2-9) are new compounds and one (1) is reported from P. forrestii for the first time. Results of the present study can benefit the rapid identification and targeted isolation of new cardiac glycosides from crude plant extracts.


Phytochemistry | 2010

Cytotoxic cassaine diterpenoid–diterpenoid amide dimers and diterpenoid amides from the leaves of Erythrophleum fordii

Dan Du; Jing Qu; Jia-Ming Wang; Shi-Shan Yu; Xiao-Guang Chen; Song Xu; Shuang-Gang Ma; Yong Li; Guang-Zhi Ding; Lei Fang

Detailed phytochemical investigation from the leaves of Erythrophleum fordii resulted in the isolation of 13 compounds, including three cassaine diterpenoid-diterpenoid amide dimers (1, 3 and 5), and seven cassaine diterpenoid amides (6 and 8-13), together with three previously reported ones, erythrophlesins D (2), C (4) and 3beta-hydroxynorerythrosuamide (7). Compounds 1, 3 and 5 are further additions to the small group of cassaine diterpenoid dimers represented by erythrophlesins A-D. Their structures were determined by analysis of extensive one- and two-dimensional NMR experiments and ESIMS methods. Cytotoxic activities of the isolated compounds were tested against HCT-8, Bel-7402, BGC-823, A549 and A2780 human cancer cell lines in the MTT test. Results showed that compounds 1 and 3-5 exhibited significantly selective cytotoxic activities (IC(50)<10 microM) against these cells, respectively.


RSC Advances | 2013

Bioactive constituents from toxic seed plants in China

Jing Qu; Shi-Shan Yu; Dan Du; Ya-Dan Wang

Toxic plants, regarded as unusual natural resources, are important sources for novel bioactive chemical entities and even new clinical drugs, and are receiving increasing attention. The present review summarizes more than 550 constituents with considerable bioactivities from about 120 toxic seed plant species in the last fifteen years (1998–2012), as well as follow-up studies on structural modification, SAR and action mechanisms, building on the foundations of the first monograph “Toxic plants in China” edited by Chen and Zheng in 1987. A thorough study on bioactive constituents from toxic plants could benefit proper utilization and improve the therapeutic index. It is hoped to lay an available foundation for future drug research and development. On the other hand, bioactive constituents could be used as probes to discover new targets and explore the mysteries of organisms.


Planta Medica | 2011

Oleanane-type triterpene saponins and cassaine-type diterpenoids from Erythrophleum fordii.

Dan Du; Lei Fang; Jing Qu; Shi-Shan Yu; Shuang-Gang Ma; Hai-Ning Lv; Jing Liu; Yuanyan Liu; Jia-Ming Wang; Xiao-Jing Wang

Phytochemical investigation of the EtOH extract of the leaves of Erythrophleum fordii led to the isolation of two oleanane-type triterpene saponins (1-2) and five cassaine-type diterpenoids (4-8) along with one known methyl 3 β-hydroxy-erythrosuamate (3). Their structures were established by extensive NMR, as well as ESI-MS analyses and acid hydrolysis. Biological evaluation of compounds 3- 8 against five human cancer cell lines revealed that compounds 5-7 exhibited potent cytotoxic activity with IC₅₀ values ranging from 1.51 to 8.68 µM.


Journal of Chromatography B | 2010

Structural characterization of trace stilbene glycosides in Lysidice brevicalyx Wei using liquid chromatography/diode-array detection/electrospray ionization tandem mass spectrometry.

Youcai Hu; Jing Qu; Yuanyan Liu; Shi-Shan Yu; Jianbei Li; Jinlan Zhang; Dan Du

The mass fragmentation patterns of stilbene glycosides isolated from the genus Lysidice were investigated by negative ion electrospray ionization tandem mass spectrometry, and the influence of collision energy on their fragmentation behavior is discussed. It is found that the presence of the Y(0)(-) and B(0)(-) ions in the MS(2) spectra is characteristic for 1-->6 linked diglycosyl stilbenes, while the Y(0)(-), Y(1)(-), and Z(1)(-) ions are representative ions of 1-->2 linked diglycosyl stilbenes. These results indicate that ESI-MS(n) in the negative ion mode can be used to differentiate 1-->6 and 1-->2 linked diglycosyl stilbenes. Based on the fragmentation rules, 9 new trace constituents were identified or tentatively characterized in a fraction of Lysidice brevicalyx by using HPLC/HRMS and HPLC-DAD/ESI-MS(n). The results of the present study can assist in on-line structural identification of analogous constituents and targeted isolation of novel compounds from crude plant extracts.


Tetrahedron | 2013

Study on absolute configurations of α/α′ chiral carbons of thiodiketopiperazines by experimental and calculated circular dichroism spectra

Jia-Ming Wang; Nan Jiang; Jing Ma; Shi-Shan Yu; Ren Xiang Tan; Jungui Dai; Yi-Kang Si; Guang-Zhi Ding; Shuang-Gang Ma; Jing Qu; Lei Fang; Dan Du

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Jing Qu

Peking Union Medical College

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Shi-Shan Yu

Peking Union Medical College

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Shuang-Gang Ma

Peking Union Medical College

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Jia-Ming Wang

Peking Union Medical College

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Lei Fang

Peking Union Medical College

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Guang-Zhi Ding

Peking Union Medical College

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Jianbei Li

Peking Union Medical College

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Jing Liu

Peking Union Medical College

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Yuanyan Liu

Peking Union Medical College

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Song Xu

Peking Union Medical College

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