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Featured researches published by Daniel A. Kopp.


Angewandte Chemie | 2001

Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins

Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard

Methanotrophic bacteria are capable of using methane as their sole source of carbon and energy. The first step in methane metabolism, the oxidation of methane to methanol, is catalyzed by a fascinating enzyme system called methane monooxygenase (MMO). The selective oxidation of the very stable C-H bond in methane under ambient conditions is a remarkable feat that has not yet been repeated by synthetic catalysts and has attracted considerable scientific and commercial interest. The best studied MMO is a complex enzyme system that consists of three soluble protein components, all of which are required for efficient catalysis. Dioxygen activation and subsequent methane hydroxylation are catalyzed by a hydroxylase enzyme that contains a non-heme diiron site. A reductase protein accepts electrons from NADH and transfers them to the hydroxylase where they are used for the reductive activation of O2 . The third protein component couples electron and dioxygen consumption with methane oxidation. In this review we examine different aspects of catalysis by the MMO proteins, including the mechanisms of dioxygen activation at the diiron site and substrate hydroxylation by the activated oxygen species. We also discuss the role of complex formation between the different protein components in regulating various aspects of catalysis.


Current Opinion in Chemical Biology | 2002

Soluble methane monooxygenase: activation of dioxygen and methane

Daniel A. Kopp; Stephen J. Lippard

The mechanisms by which soluble methane monooxygenase uses dioxygen to convert methane selectively to methanol have come into sharp focus. Diverse techniques have clarified subtle details about each step in the reaction, from binding and activating dioxygen, to hydroxylation of alkanes and other substrates, to the electron transfer events required to complete the catalytic cycle.


Angewandte Chemie | 2001

Aktivierung von Disauerstoff und Hydroxylierung von Methan durch lösliche Methan‐Monooxygenase: eine Geschichte von zwei Eisenatomen und drei Proteinen

Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard

Methanotrophe Bakterien nutzen Methan als ausschliesliche Quelle von Kohlenstoff und Energie. Der erste Schritt des Methan-Metabolismus, die Oxidation von Methan zu Methanol, wird von einem faszinierenden Enzymsystem namens Methan-Monooxygenase (MMO) katalysiert. Die selektive Oxidation der auserst stabilen C-H-Bindung von Methan bei Raumtemperatur ist eine Meisterleistung, die bisher mit synthetischen Katalysatoren nicht reproduziert werden konnte und die ein betrachtliches wissenschaftliches wie kommerzielles Interesse geweckt hat. Bei der am besten untersuchten MMO handelt es sich um ein komplexes Enzymsystem aus drei loslichen Proteinkomponenten, die alle fur die effiziente Katalyse erforderlich sind: Eine Hydroxylase mit einer Nichtham-Dieisen-Einheit katalysiert die Aktivierung von Disauerstoff und die nachfolgende Hydroxylierung von Methan; eine Reduktase erhalt Elektronen von NADH und ubertragt sie auf die Hydroxylase, von der sie zur reduktiven Aktivierung von Disauerstoff verwendet werden; die dritte Proteinkomponente verknupft den Elektronen- und Sauerstoffverbrauch mit der Oxidation von Methan. In dieser Ubersicht diskutieren wir einige Aspekte der Katalyse durch die MMO-Proteine und behandeln dabei detailliert Studien zum Mechanismus der Aktivierung von Disauerstoff an der Dieisen-Einheit sowie zur Substrathydroxylierung durch die aktivierte Sauerstoffspezies. Ferner befassen wir uns mit der Rolle, die die Bildung von Komplexen zwischen den Proteinkomponenten bei der Regulierung diverser Aspekte der Katalyse spielt.


Angewandte Chemie | 2001

Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard

Methanotrophic bacteria are capable of using methane as their sole source of carbon and energy. The first step in methane metabolism, the oxidation of methane to methanol, is catalyzed by a fascinating enzyme system called methane monooxygenase (MMO). The selective oxidation of the very stable C-H bond in methane under ambient conditions is a remarkable feat that has not yet been repeated by synthetic catalysts and has attracted considerable scientific and commercial interest. The best studied MMO is a complex enzyme system that consists of three soluble protein components, all of which are required for efficient catalysis. Dioxygen activation and subsequent methane hydroxylation are catalyzed by a hydroxylase enzyme that contains a non-heme diiron site. A reductase protein accepts electrons from NADH and transfers them to the hydroxylase where they are used for the reductive activation of O(2). The third protein component couples electron and dioxygen consumption with methane oxidation. In this review we examine different aspects of catalysis by the MMO proteins, including the mechanisms of dioxygen activation at the diiron site and substrate hydroxylation by the activated oxygen species. We also discuss the role of complex formation between the different protein components in regulating various aspects of catalysis.


Journal of the American Chemical Society | 2002

Evaluation of Norcarane as a probe for radicals in cytochome P450- and soluble methane monooxygenase-catalyzed hydroxylation reactions

Martin Newcomb; Runnan Shen; Yun Lu; Minor J. Coon; Paul F. Hollenberg; Daniel A. Kopp; Stephen J. Lippard


Journal of the American Chemical Society | 1999

Cationic Species Can Be Produced in Soluble Methane Monooxygenase-Catalyzed Hydroxylation Reactions; Radical Intermediates Are Not Formed

Seung-Yong Choi; Philip E. Eaton; Daniel A. Kopp; Stephen J. Lippard; Martin Newcomb; Runnan Shen


Biochemistry | 2001

Electron-transfer reactions of the reductase component of soluble methane monooxygenase from Methylococcus capsulatus (Bath).

Daniel A. Kopp; George T. Gassner; Jessica L. Blazyk; Stephen J. Lippard


Journal of the American Chemical Society | 2002

Product binding to the diiron(III) and mixed-valence diiron centers of methane monooxygenase hydroxylase studied by 1,2H and 19F ENDOR spectroscopy

Stoyan K. Smoukov; Daniel A. Kopp; Ann M. Valentine; Roman Davydov; Stephen J. Lippard; Brian M. Hoffman


Journal of Biological Chemistry | 2003

Structural Features of Covalently Cross-linked Hydroxylase and Reductase Proteins of Soluble Methane Monooxygenase as Revealed by Mass Spectrometric Analysis

Daniel A. Kopp; Eric A. Berg; Catherine E. Costello; Stephen J. Lippard


Journal of the American Chemical Society | 2006

Erratum: Evaluation of norcarane as a probe for radicals in cytochrome P450- and soluble methane monooxygenase-catalyzed hydroxylation reactions (Journal of the American Chemical Society (2002) 124 (6879-6886))

Martin Newcomb; Runnan Shen; Yun Lu; Minor J. Coon; Paul F. Hollenberg; Daniel A. Kopp; Stephen J. Lippard

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Stephen J. Lippard

Massachusetts Institute of Technology

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Jessica L. Blazyk

Massachusetts Institute of Technology

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Maarten Merkx

Eindhoven University of Technology

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Martin Newcomb

University of Illinois at Chicago

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Runnan Shen

University of Illinois at Chicago

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Yun Lu

University of Illinois at Chicago

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Jens Müller

University of Saskatchewan

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