Daniel Hollas
Institute of Chemical Technology in Prague
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Featured researches published by Daniel Hollas.
Physical Chemistry Chemical Physics | 2013
Ondřej Svoboda; Daniel Hollas; Milan Ončák; Petr Slavíček
We study dynamical processes following water dimer ionization. The nonadiabatic dynamical simulations of the water dimer radical cation are performed using a surface hopping technique and a Complete Active Space-Self Consistent Field (CASSCF) method for the description of electronic structure. The main goal of this study is to find out whether a state-dependent reactivity is observed for the water dimer radical cation. We provide a detailed mapping of the potential energy surfaces (PESs) in the relevant coordinates for different electronic states. Dynamical patterns are discussed on the basis of static PES cuts and available experimental data. As a product of the reaction, we observed either proton transferred structure (H3O(+)···OH˙) or various dissociated structures (H3O(+) + OH˙, H2O˙(+) + H2O, H˙ + OH˙ + H2O˙(+)). The relative yields are controlled by the populated electronic state of the radical cation. The proton transfer upon the HOMO electron ionization is an ultrafast process, taking less than 100 fs, in cases of higher energy ionization the dynamical processes occur on longer timescales (200-300 fs). We also discuss the implications of our simulations for the efficiency of the recently identified intermolecular coulomb decay (ICD) process in the water dimer.
Journal of Physical Chemistry A | 2014
Viktoriya Poterya; Jaroslav Kočišek; Jozef Lengyel; Pavla Svrčková; Andriy Pysanenko; Daniel Hollas; Petr Slavíček; Michal Fárník
The photochemistry of CF2Cl2 molecules deposited on argon and ice nanoparticles was investigated. The clusters were characterized via electron ionization mass spectrometry, and the photochemistry was revealed by the Cl fragment velocity map imaging after the CF2Cl2 photodissociation at 193 nm. The complex molecular beam experiment was complemented by ab initio calculations. The (CF2Cl2)n clusters were generated in a coexpansion with Ar buffer gas. The photodissociation of molecules in the (CF2Cl2)n clusters yields predominantly Cl fragments with zero kinetic energy: caging. The CF2Cl2 molecules deposited on large argon clusters in a pickup experiment are highly mobile and coagulate to form the (CF2Cl2)n clusters on ArN. The photodissociation of the CF2Cl2 molecules and clusters on ArN leads to the caging of the Cl fragment. On the other hand, the CF2Cl2 molecules adsorbed on the (H2O)N ice nanoparticles do not form clusters, and no Cl fragments are observed from their photodissociation. Since the CF2Cl2 molecule was clearly adsorbed on (H2O)N, the missing Cl signal is interpreted in terms of surface orientation, possibly via the so-called halogen bond and/or embedding of the CF2Cl2 molecule on the disordered surface of the ice nanoparticles.
Journal of Physical Chemistry B | 2015
Isaak Unger; Daniel Hollas; Robert Seidel; Stephan Thürmer; Emad F. Aziz; Petr Slavíček; Bernd Winter
Recently, a new family of autoionization processes has been identified in aqueous phases. The processes are initiated by core-electron ionization of a solute molecule and involve proton transfer along the solute-solvent hydrogen bond. As a result, short-lived singly charged cations form with structures sharing a proton between solute and solvent molecules. These molecular transients decay by autoionization, which creates reactive dicationic species with the positive charges delocalized over the entire molecular entity. Here, we investigate the ultrafast electron and nuclear dynamics following the core ionization of hydrated ammonia and glycine. Both molecules serve as models for exploring the possible role of the nonlocal relaxation processes in the chemical reactivity at the interface between, for instance, a protein surface and aqueous solution. The nature of the postionization dynamical processes is revealed by high-accuracy Auger-electron spectroscopy measurements on liquid microjets in vacuum. The proton-transfer-mediated processes are identified by electron signals in the high-energy tail of the Auger spectra with no analogue in the Auger spectra of the corresponding gas-phase molecule. This high-energy tail is suppressed for deuterated molecules. Such an isotope effect is found to be smaller for aqueous ammonia as compared to the hydrated H2O molecule, wherein hydrogen bonds are strong. An even weaker hydrogen bonding for the hydrated amino groups in glycine results in a negligibly small proton transfer. The dynamical processes and species formed upon the nitrogen-1s core-level ionization are interpreted using methods of quantum chemistry and molecular dynamics. With the assistance of such calculations, we discuss the conditions for the proton-transfer-mediated relaxation processes to occur. We also consider the solvent librational dynamics as an alternative intermolecular ultrafast relaxation pathway. In addition, we provide experimental evidence for the umbrella-type motion in aqueous ammonia upon core ionization. This intramolecular channel proceeds in parallel with intermolecular relaxation processes in the solution.
Journal of Chemical Theory and Computation | 2015
Paulo Cabral do Couto; Daniel Hollas; Petr Slavíček
We investigate the performance of optimally tuned range-separated hybrid functionals (OT-RSH) for modeling X-ray absorption spectra (XAS) of a benchmark set of simple molecules (water, ammonia, methane, hydrogen peroxide, hydrazine, and ethane), using time-dependent density functional theory (TDDFT). Spectra were simulated within the Path Integral based Reflection Principle methodology. Relative intensities, peak positions, and widths were compared with available experimental data. We show that the OT-RSH approach outperforms empirically parametrized functionals in terms of relative peak positions and intensities. Furthermore, we investigate the effect of geometry specific tuning where the range separation parameter is optimized for each geometry. Finally, we propose a simple correction scheme allowing for calculations of XAS on the absolute energy scale using the OT-RSH approach combined with ΔSCF/TDDFT-based calculations of core ionization energies.
Journal of Chemical Theory and Computation | 2018
Daniel Hollas; Lukáš Šištík; Edward G. Hohenstein; Todd J. Martínez; Petr Slavíček
We show that the floating occupation molecular orbital complete active space configuration interaction (FOMO-CASCI) method is a promising alternative to the widely used complete active space self-consistent field (CASSCF) method in direct nonadiabatic dynamics simulations. We have simulated photodynamics of three archetypal molecules in photodynamics: ethylene, methaniminium cation, and malonaldehyde. We compared the time evolution of electronic populations and reaction mechanisms as revealed by the FOMO-CASCI and CASSCF approaches. Generally, the two approaches provide similar results. Some dynamical differences are observed, but these can be traced back to energetically minor differences in the potential energy surfaces. We suggest that the FOMO-CASCI method represents, due to its efficiency and stability, a promising approach for direct ab initio dynamics in the excited state.
Scientific Reports | 2017
Daniel Hollas; Marvin Nicolas Pohl; Robert Seidel; Emad F. Aziz; Petr Slavíček; Bernd Winter
We report on chemical reactions triggered by core-level ionization of ammonium (
Journal of Chemical Theory and Computation | 2010
Pavel Banáš; Daniel Hollas; Marie Zgarbová; Petr Jurečka; Modesto Orozco; Thomas E. Cheatham; Jiří Šponer; Michal Otyepka
Journal of Physical Chemistry B | 2010
Vojtěch Mlýnský; Pavel Banáš; Daniel Hollas; Kamila Réblová; Nils G. Walter; Jiří Šponer; Michal Otyepka
{{\rm{NH}}}_{4}^{+}
Journal of Chemical Theory and Computation | 2016
Daniel Hollas; Eva Muchová; Petr Slavíček
Chemical Physics Letters | 2015
Daniel Hollas; Ondřej Svoboda; Petr Slavíček
NH4+) cation in aqueous solution. Based on a combination of photoemission experiments from a liquid microjet and high-level ab initio simulations, we identified simultaneous single and double proton transfer occurring on a very short timescale spanned by the Auger-decay lifetime. Molecular dynamics simulations indicate that the proton transfer to a neighboring water molecule leads to essentially complete formation of H3O+ (aq) and core-ionized ammonia