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Dive into the research topics where Daniel Milej is active.

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Featured researches published by Daniel Milej.


Biomedical Optics Express | 2014

Determination of reference values for optical properties of liquid phantoms based on Intralipid and India ink

L. Spinelli; Marcin Botwicz; Norbert Zolek; Michal Kacprzak; Daniel Milej; Piotr Sawosz; Adam Liebert; Udo M. Weigel; Turgut Durduran; Florian Foschum; Alwin Kienle; Francois Baribeau; Sebastien Leclair; J-P Bouchard; Isabelle Noiseux; Pascal Gallant; Ozzy Mermut; Andrea Farina; Antonio Pifferi; Alessandro Torricelli; Rinaldo Cubeddu; H-C Ho; Mikhail Mazurenka; Heidrun Wabnitz; Katy Klauenberg; Olha Bodnar; Clemens Elster; M. Benazech-Lavoue; Yves Bérubé-Lauzière; Frédéric Lesage

A multi-center study has been set up to accurately characterize the optical properties of diffusive liquid phantoms based on Intralipid and India ink at near-infrared (NIR) wavelengths. Nine research laboratories from six countries adopting different measurement techniques, instrumental set-ups, and data analysis methods determined at their best the optical properties and relative uncertainties of diffusive dilutions prepared with common samples of the two compounds. By exploiting a suitable statistical model, comprehensive reference values at three NIR wavelengths for the intrinsic absorption coefficient of India ink and the intrinsic reduced scattering coefficient of Intralipid-20% were determined with an uncertainty of about 2% or better, depending on the wavelength considered, and 1%, respectively. Even if in this study we focused on particular batches of India ink and Intralipid, the reference values determined here represent a solid and useful starting point for preparing diffusive liquid phantoms with accurately defined optical properties. Furthermore, due to the ready availability, low cost, long-term stability and batch-to-batch reproducibility of these compounds, they provide a unique fundamental tool for the calibration and performance assessment of diffuse optical spectroscopy instrumentation intended to be used in laboratory or clinical environment. Finally, the collaborative work presented here demonstrates that the accuracy level attained in this work for optical properties of diffusive phantoms is reliable.


Journal of Biomedical Optics | 2011

Wavelength-resolved measurements of fluorescence lifetime of indocyanine green

Anna Gerega; Norbert Zolek; Tomasz Soltysinski; Daniel Milej; Piotr Sawosz; Beata Toczylowska; Adam Liebert

We study fluorescence lifetime of indocyanine green (ICG) using femtosecond laser and sensitive detection based on time-correlated single-photon counting. A time-resolved multichannel spectral system is constructed and applied for determination of the fluorescence lifetime of the ICG in different solvents. Emission properties of ICG in water, milk, and 1% intralipid solution are investigated. Fluorescence of the fluorophore of different concentrations (in a range of 1.7-160 μM) dissolved in different solutions is excited by femtosecond pulses generated with the use of Ti:Sa laser tuned within the range of 740-790 nm. It is observed that fluorescence lifetime of ICG in water is 0.166 ± 0.02 ns and does not depend on excitation and emission wavelengths. We also show that for the diffusely scattering solvents (milk and intralipid), the lifetime may depend on the dye concentration (especially for large concentrations of ICG). This effect should be taken into account when analyzing changes in the mean time of arrival of fluorescence photons excited in ICG dissolved in such optically turbid media.


Journal of Biomedical Optics | 2014

Performance assessment of time-domain optical brain imagers, part 2: nEUROPt protocol

Heidrun Wabnitz; Alexander Jelzow; Mikhail Mazurenka; Oliver Steinkellner; Rainer Macdonald; Daniel Milej; Norbert Żołek; Michal Kacprzak; Piotr Sawosz; Roman Maniewski; Adam Liebert; Salavat Magazov; Jeremy C. Hebden; Fabrizio Martelli; Paola Di Ninni; Giovanni Zaccanti; Alessandro Torricelli; Davide Contini; Rebecca Re; Lucia Zucchelli; Lorenzo Spinelli; Rinaldo Cubeddu; Antonio Pifferi

The nEUROPt protocol is one of two new protocols developed within the European project nEUROPt to characterize the performances of time-domain systems for optical imaging of the brain. It was applied in joint measurement campaigns to compare the various instruments and to assess the impact of technical improvements. This protocol addresses the characteristic of optical brain imaging to detect, localize, and quantify absorption changes in the brain. It was implemented with two types of inhomogeneous liquid phantoms based on Intralipid and India ink with well-defined optical properties. First, small black inclusions were used to mimic localized changes of the absorption coefficient. The position of the inclusions was varied in depth and lateral direction to investigate contrast and spatial resolution. Second, two-layered liquid phantoms with variable absorption coefficients were employed to study the quantification of layer-wide changes and, in particular, to determine depth selectivity, i.e., the ratio of sensitivities for deep and superficial absorption changes. We introduce the tests of the nEUROPt protocol and present examples of results obtained with different instruments and methods of data analysis. This protocol could be a useful step toward performance tests for future standards in diffuse optical imaging.


Journal of Biomedical Optics | 2011

Assessment of inflow and washout of indocyanine green in the adult human brain by monitoring of diffuse reflectance at large source-detector separation.

Adam Liebert; Piotr Sawosz; Daniel Milej; Michal Kacprzak; Wojciech Weigl; Marcin Botwicz; Joanna Mączewska; Katarzyna Fronczewska; Ewa Mayzner-Zawadzka; Leszek Królicki; Roman Maniewski

Recently, it was shown in measurements carried out on humans that time-resolved near-infrared reflectometry and fluorescence spectroscopy may allow for discrimination of information originating directly from the brain avoiding influence of contaminating signals related to the perfusion of extracerebral tissues. We report on continuation of these studies, showing that the near-infrared light can be detected noninvasively on the surface of the tissue at large interoptode distance. A multichannel time-resolved optical monitoring system was constructed for measurements of diffuse reflectance in optically turbid medium at very large source-detector separation up to 9 cm. The instrument was applied during intravenous injection of indocyanine green and the distributions of times of flight of photons were successfully acquired showing inflow and washout of the dye in the tissue. Time courses of the statistical moments of distributions of times of flight of photons are presented and compared to the results obtained simultaneously at shorter source-detector separations (3, 4, and 5 cm). We show in a series of experiments carried out on physical phantom and healthy volunteers that the time-resolved data acquisition in combination with very large source-detector separation may allow one to improve depth selectivity of perfusion assessment in the brain.


Physics in Medicine and Biology | 2012

Time-resolved detection of fluorescent light during inflow of ICG to the brain?a methodological study

Daniel Milej; Anna Gerega; Norbert Żołek; Wojciech Weigl; Michal Kacprzak; Piotr Sawosz; Joanna Mączewska; Katarzyna Fronczewska; Ewa Mayzner-Zawadzka; Leszek Królicki; Roman Maniewski; Adam Liebert

It was reported that time-resolved reflectance measurements carried out during inflow and washout of an optical contrast agent may provide information on the blood supply to the brain cortex of human adults. It was also shown that a measurement of fluorescence excited in the dye circulating in the brain is feasible. Unfortunately, patterns of time-resolved fluorescence signals observed during in vivo measurements are difficult to interpret. The aim of this study was to analyze the influence of several factors on the fluorescence signals measured during in vivo experiments. A laboratory instrument for recording the distributions of arrival of fluorescence photons was constructed and optimized for measurements on humans. Monte Carlo simulations and laboratory measurements on liquid phantoms as well as in vivo measurements on healthy volunteers were carried out. An influence of source-detector separation, position of the source-detector pair on the head, as well as a dose of the injected indocyanine green (ICG) on the fluorescence signals were studied in detail. It was shown that even for a small dose of ICG (0.025 mg kg(-1)) the time-resolved signals can be successfully detected on the surface of the head. Strong influence of the studied factors on the fluorescence signals was observed. It was also noted that the changes in moments of distributions of arrival times of fluorescence photons depend on the anatomical structure of the tissues located between the source and the detector.


Opto-electronics Review | 2010

Advantages of fluorescence over diffuse reflectance measurements tested in phantom experiments with dynamic inflow of ICG

Daniel Milej; Michal Kacprzak; N. Żołek; Piotr Sawosz; Anna Gerega; Roman Maniewski; Adam Liebert

Time-resolved measurements of diffuse reflectance and fluorescence were carried out using phantom with dynamic inflow of indocyanine green (ICG) in tubes located at different depths. Better sensitivity of fluorescence signals related to the inflow of the dye was observed in comparison to simultaneously acquired diffuse reflectance. Obtained results can be referred to results of in-vivo measurements. We have observed much larger amplitude of changes in relative number of detected photons, mean time of flight and variance of the distributions of times of arrival of fluorescence photons than amplitudes of respective parameters measured from diffuse reflectance distributions of times of flight of photons. The constructed phantom allows us to study influence of concentration of the dye in the tube and the surrounding medium as well as temporal relation between appearance of the boli in deeper and superficial tube. Results of the study were used in optimization of the time-resolved multichannel system for simultaneous monitoring of fluorescence and reflectance.


Opto-electronics Review | 2014

Time-resolved multi-channel optical system for assessment of brain oxygenation and perfusion by monitoring of diffuse reflectance and fluorescence

Daniel Milej; Anna Gerega; Michal Kacprzak; Piotr Sawosz; W. Weigl; Roman Maniewski; Adam Liebert

Time-resolved near-infrared spectroscopy is an optical technique which can be applied in tissue oxygenation assessment. In the last decade this method is extensively tested as a potential clinical tool for noninvasive human brain function monitoring and imaging. In the present paper we show construction of an instrument which allows for: (i) estimation of changes in brain tissue oxygenation using two-wavelength spectroscopy approach and (ii) brain perfusion assessment with the use of single-wavelength reflectometry or fluorescence measurements combined with ICG-bolus tracking. A signal processing algorithm based on statistical moments of measured distributions of times of flight of photons is implemented. This data analysis method allows for separation of signals originating from extra- and intracerebral tissue compartments. In this paper we present compact and easily reconfigurable system which can be applied in different types of time-resolved experiments: two-wavelength measurements at 687 and 832 nm, single wavelength reflectance measurements at 760 nm (which is at maximum of ICG absorption spectrum) or fluorescence measurements with excitation at 760 nm. Details of the instrument construction and results of its technical tests are shown. Furthermore, results of in-vivo measurements obtained for various modes of operation of the system are presented.


NeuroImage | 2014

Assessment of cerebral perfusion in post-traumatic brain injury patients with the use of ICG-bolus tracking method

Wojciech Weigl; Daniel Milej; Anna Gerega; Beata Toczylowska; Michal Kacprzak; Piotr Sawosz; Marcin Botwicz; Roman Maniewski; Ewa Mayzner-Zawadzka; Adam Liebert

The aim of this study was to verify the usefulness of the time-resolved optical method utilizing diffusely reflected photons and fluorescence signals combined with intravenous injection of indocyanine green (ICG) in the assessment of brain perfusion in post-traumatic brain injury patients. The distributions of times of flight (DTOFs) of diffusely reflected photons were acquired together with the distributions of times of arrival (DTAs) of fluorescence photons. The data analysis methodology was based on the observation of delays between the signals of statistical moments (number of photons, mean time of flight and variance) of DTOFs and DTAs related to the inflow of ICG to the extra- and intracerebral tissue compartments. Eleven patients with brain hematoma, 15 patients with brain edema and a group of 9 healthy subjects were included in this study. Statistically significant differences between parameters obtained in healthy subjects and patients with brain hematoma and brain edema were observed. The best optical parameter to differentiate patients and control group was variance of the DTOFs or DTAs. Results of the study suggest that time-resolved optical monitoring of inflow of the ICG seems to be a promising tool for detecting cerebral perfusion insufficiencies in critically ill patients.


Opto-electronics Review | 2010

Time-resolved imaging of fluorescent inclusions in optically turbid medium — phantom study

Michal Kacprzak; Adam Liebert; Piotr Sawosz; N. Żołek; Daniel Milej; Roman Maniewski

We present results of application of a time-resolved optical system for imaging of fluorescence excited in an inclusion containing indocyanine green (ICG), and located in optically turbid medium. The developed imaging system enabled simultaneous acquisition of fluorescence and diffusive reflectance. Eight independent time-resolved measurement channels based on time-correlated single photon counting technique were applied. In four of these channels, used for the fluorescence detection, sets of filters were applied in order to block the excitation light. Fast optomechanical switches allowed us to illuminate sequentially nine different spots on the surface of the studied object and finally 4×4 pixels maps at excitation and emission wavelengths were obtained. A liquid phantom used in this study consists of the fish tank filed with a solution ofmilk and water with black ink added to obtain optical properties in the range of the optical properties typical for the living tissue. A gel ball of a diameter of 5 mm with precisely controlled concentration of ICG was immersed in the liquid. The measurements were performed for inclusion located at different depths and for various ICG concentrations in the gel ball and in the surrounding liquid. The recorded distributions of times of arrival (DTA) of fluorescence photons and times of flight (DTOF) of diffusely reflected photons were analyzed by calculation of their statistical moments. We observed specific changes in moments of the measured DTAs as a function of depth of immersion of the fluorescent inclusion in the medium. We noted also that the changes of moments depend significantly on concentration of the dye in the fluorescence inclusion as well as in the surrounding liquid.


Biomedical Optics Express | 2013

Variance of time-of-flight distribution is sensitive to cerebral blood flow as demonstrated by ICG bolus-tracking measurements in adult pigs

Jonathan T. Elliott; Daniel Milej; Anna Gerega; Wojciech Weigl; Mamadou Diop; Laura Morrison; Ting-Yim Lee; Adam Liebert; Keith St. Lawrence

Variance of time-of-flight distributions have been shown to be more sensitive to cerebral blood flow (CBF) during dynamic-contrast enhanced monitoring of neurotrauma patients than attenuation. What is unknown is the degree to which variance is affected by changes in extracerebral blood flow. Furthermore, the importance of acquiring the arterial input function (AIF) on quantitative analysis of the data is not yet clear. This animal study confirms that variance is both sensitive and specific to changes occurring in the brain when measurements are acquired on the surface of the scalp. Furthermore, when the variance data along with the measured AIF is analyzed using a nonparametric deconvolution method, the recovered change in CBF is in good agreement with CT perfusion values.

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Adam Liebert

Polish Academy of Sciences

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Michal Kacprzak

Polish Academy of Sciences

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Piotr Sawosz

Polish Academy of Sciences

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Anna Gerega

Polish Academy of Sciences

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Roman Maniewski

Polish Academy of Sciences

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Wojciech Weigl

Medical University of Warsaw

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Norbert Zolek

Polish Academy of Sciences

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Ewa Mayzner-Zawadzka

Medical University of Warsaw

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Beata Toczylowska

Polish Academy of Sciences

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