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Featured researches published by Daniel P. Bednarik.


Circulation Research | 2005

Mixed Messages. Transcription Patterns in Failing and Recovering Human Myocardium

Kenneth B. Margulies; Sunil Matiwala; Carla Cornejo; Henrik S. Olsen; William A. Craven; Daniel P. Bednarik

In previous studies, mechanical support of medically refractory hearts with a left ventricular assist device (LVAD) has induced regression of many morphological and functional abnormalities characteristic of failing human hearts. To identify transcriptional adaptations in failing and LVAD-supported hearts, we performed a comprehensive transcription analysis using the Affymetrix microarray platform and 199 human myocardial samples from nonfailing, failing, and LVAD-supported human hearts. We also used a novel analytical strategy that defines patterns of interest based on multiple intergroup comparisons. Although over 3088 transcripts exhibited significantly altered abundance in heart failure, most of these did not exhibit a consistent response to LVAD support based on our analysis. Of those 238 with a consistent response to LVAD support, more than 75% exhibited persistence or exacerbation of HF-associated transcriptional abnormalities whereas only 11%, 5%, and 2% exhibited partial recovery, normalization, and overcorrection responses, respectively. Even among genes implicated by previous reports of LVAD-associated myocardial improvements, partial or complete normalization of transcription did not predominate. The magnitude of differences in transcript abundance between nonfailing and failing hearts, and between failing an LVAD-supported hearts, tended to be low with changes greater than or equal to 2-fold infrequently observed. Our results indicate that morphological or functional myocardial improvements may occur without widespread normalization of pathological transcriptional patterns. These observations also suggest that many failure-associated transcriptional changes have only a limited role in regulating cardiac structure and function and may represent epiphenomena and/or nonspecific myocardial plasticity responses. Differences in mRNA localization, translation efficiency, and posttranslational protein modifications or interactions may be more pivotal in regulating myocardial structure and function.


Journal of Pharmacology and Experimental Therapeutics | 2004

Pharmacological Effects of ATI22-107 [2-(2-{2-[2-Chloro-4-(6-oxo-1,4,5,6-tetrahydro-pyridazin-3-yl)-phenoxy]-acetylamino}-ethoxymethyl)-4-(2-chloro-phenyl)-6-methyl-1,4-dihydro-pyridine-3,5-dicarboxylic Acid Dimethyl Ester)], a Novel Dual Pharmacophore, on Myocyte Calcium Cycling and Contractility

Albert S. Jung; Michael P. Quaile; Geoffrey D. Mills; Daniel P. Bednarik; Steven R. Houser; Kenneth B. Margulies

Historically, inhibitors of type III phosphodiesterases (PDE-III) have been effective inotropes in mammalian myocardium, but their clinical utility has been limited by adverse events, including arrhythmias that are considered to be due to Ca2+ overload. ATI22-107 [2-(2-{2-[2-chloro-4-(6-oxo-1,4,5,6-tetrahydro-pyridazin-3-yl)-phenoxy]-acetylamino}-ethoxymethyl)-4-(2-chlorophenyl)-6-methyl-1,4-dihydro-pyridine-3,5-dicarboxylic acid dimethyl ester)], a novel, dual pharmacophore compound, was designed to simultaneously inhibit the cardiac phosphodiesterase (PDE-III) and produce inotropic effects, whereas inhibiting the L-type calcium channel (LTCC) was designed to minimize increases in diastolic Ca2+. We compared the effects of ATI22-107 and enoximone, a pure PDE-III inhibitor, on the Fluo-3 calcium transient in normal feline ventricular myocytes and trabeculae. Enoximone-induced dose-dependent increases in peak [Ca2+]i, diastolic [Ca2+]i, T50, and T75. ATI22-107 demonstrated similar dose-dependent increases in peak [Ca2+]i at 300 nM and 1.0 μM doses, with no further increases at higher doses. Throughout the dosing range, ATI22-107 induced much smaller, if any, increases in diastolic [Ca2+]i, T25, and T75. Current measurement of LTCC via patch-clamp techniques revealed dose-dependent decreases in LTCC current with an increasing dose of ATI22-107, thereby validating the dual functionality of the drug that has been proposed in this study. Studies in isolated trabeculae demonstrated that enoximone-induced a dose-dependent augmentation of the entire force-frequency relation in normal myocardium, whereas augmentation of contractility was only observed at lower stimulation frequencies with ATI22-107. These results demonstrate the effects of the LTCC-antagonizing moiety of ATI22-107 and suggest that the novel simultaneous combination of PDE-III and LTCC inhibition by one molecule may produce a favorable profile of limited inotropy without detrimental effects of increased diastolic [Ca2+]i.


Journal of Pharmacology and Experimental Therapeutics | 2004

Pharmacological Effects of ATI22-107, a Novel Dual-Pharmacophore, on Myocyte Calcium Cycling and Contractility

Albert S. Jung; Michael P. Quaile; Geoffrey D. Mills; Daniel P. Bednarik; Steven R. Houser; Kenneth B. Margulies

Historically, inhibitors of type III phosphodiesterases (PDE-III) have been effective inotropes in mammalian myocardium, but their clinical utility has been limited by adverse events, including arrhythmias that are considered to be due to Ca2+ overload. ATI22-107 [2-(2-{2-[2-chloro-4-(6-oxo-1,4,5,6-tetrahydro-pyridazin-3-yl)-phenoxy]-acetylamino}-ethoxymethyl)-4-(2-chlorophenyl)-6-methyl-1,4-dihydro-pyridine-3,5-dicarboxylic acid dimethyl ester)], a novel, dual pharmacophore compound, was designed to simultaneously inhibit the cardiac phosphodiesterase (PDE-III) and produce inotropic effects, whereas inhibiting the L-type calcium channel (LTCC) was designed to minimize increases in diastolic Ca2+. We compared the effects of ATI22-107 and enoximone, a pure PDE-III inhibitor, on the Fluo-3 calcium transient in normal feline ventricular myocytes and trabeculae. Enoximone-induced dose-dependent increases in peak [Ca2+]i, diastolic [Ca2+]i, T50, and T75. ATI22-107 demonstrated similar dose-dependent increases in peak [Ca2+]i at 300 nM and 1.0 μM doses, with no further increases at higher doses. Throughout the dosing range, ATI22-107 induced much smaller, if any, increases in diastolic [Ca2+]i, T25, and T75. Current measurement of LTCC via patch-clamp techniques revealed dose-dependent decreases in LTCC current with an increasing dose of ATI22-107, thereby validating the dual functionality of the drug that has been proposed in this study. Studies in isolated trabeculae demonstrated that enoximone-induced a dose-dependent augmentation of the entire force-frequency relation in normal myocardium, whereas augmentation of contractility was only observed at lower stimulation frequencies with ATI22-107. These results demonstrate the effects of the LTCC-antagonizing moiety of ATI22-107 and suggest that the novel simultaneous combination of PDE-III and LTCC inhibition by one molecule may produce a favorable profile of limited inotropy without detrimental effects of increased diastolic [Ca2+]i.


Journal of Heart and Lung Transplantation | 2002

Enhanced immunoglobulin expression after prolonged mechanical support with left ventricular assist devices in myocardial samples from patients with severe congestive heart failure: a possible indicator of augmented humoral responsiveness

Howard J. Eisen; Daniel P. Bednarik; Kenneth B. Margulies

tized patient (pt), especially in the setting of a positive donorspecific crossmatch (CM) can result in poor clinical outcome. Positive donor CM in left ventricular assist device (LVAD) pts awaiting CT may delay finding a suitable donor. The goal of our study was to determine if sensitized LVAD pts with positive flow cytometry (FC) donor specific T and B cell CM receiving plasmapheresis and CytoGam immediately prior to transplantation can undergo successful CT inspite of positive donor CM. Methods: Four pts on LVAD with strongly positive T and B cell FC donor CM underwent plasmapheresis and intravenous (IV) infusion of 20 gram CytoGam immediately prior to CT. Pts 1 and 4 who remained CM positive after CT received IV thymoglobulin 1.5 mg/kg/day for 5 days. Pt 2 who was B cell CM negative immediately post CT received Zenapax 1 mg/kg IV within 24 hours after CT and every 2 weeks for a total of 5 doses. All pts received tacrolimus, mycophenolate mofetil and prednisone as maintenance therapy. Results:


Archive | 1998

186 Human Secreted Proteins

Steven M. Ruben; Craig A. Rosen; Daniel R. Soppet; Kenneth C. Carter; Daniel P. Bednarik; Gregory A. Endress; Guo-Liang Yu; Jian Ni; Ping Feng; Paul E. Young; John M. Greene; Ann M. Ferrie; D. Roxanne Duan; Jing-Shan Hu; Kimberly A. Florence; Henrik S. Olsen; Carrie L. Fischer; Reinhard Ebner; Laurie A. Brewer; Paul A. Moore; Yanggu Shi; David W. Lafleur; Yi Li; Zhizhen Zeng; Hla Kyaw


Archive | 1998

70 Human Secreted Proteins

Steven M. Ruben; Craig A. Rosen; Carrie L. Fischer; Daniel R. Soppet; Kenneth C. Carter; Daniel P. Bednarik; Gregory A. Endress; Guo-Liang Yu; Jian Ni; Ping Feng; Paul E. Young; John M. Greene; Ann M. Ferrie; Roxanne D. Duan; Jing-Shan Hu; Kimberley A. Florence; Henrik S. Olsen; Reinhard Ebner; Laurie A. Brewer; Paul A. Moore; Yanggu Shi; David W. Lafleur; Yi Li; Zhizhen Zeng; Hla Kyaw


Journal of Biological Chemistry | 2001

Human hypoxanthine-(guanine) phosphoribosyl transferase-2

Daniel P. Bednarik; Craig A. Rosen; Mark D. Adams


Journal of the American College of Cardiology | 2009

Genomics, Transcriptional Profiling, and Heart Failure

Kenneth B. Margulies; Daniel P. Bednarik; Daniel L. Dries


Archive | 1998

Secreted Protein HODAZ50

Steven M. Ruben; Craig A. Rosen; Carrie L. Fischer; Daniel R. Soppet; Kenneth C. Carter; Daniel P. Bednarik; Gregory A. Endress; Guo-Liang Yu; Jian Ni; Ping Feng; Paul E. Young; John M. Greene; Ann M. Ferrie; Roxanne D. Duan; Jing-Shan Hu; Kimberly A. Florence; Henrik S. Olsen; Reinhard Ebner; Laurie A. Brewer; Yanggu Shi


Archive | 2005

Soluble interleukin-1 receptor accessory molecule

Daniel P. Bednarik; Henrik S. Olsen; Craig A. Rosen

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