Daniel Rojas-Tapias
Cornell University
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Publication
Featured researches published by Daniel Rojas-Tapias.
Water Air and Soil Pollution | 2012
Daniel Rojas-Tapias; Ruth Bonilla; Jenny Dussán
The effect of plant growth-promoting bacteria inoculation on Helianthus annuus growth and copper (Cu) uptake was investigated. For this, the strains CC22, CC24, CC30, and CC33 previously isolated from heavy metal- and hydrocarbon-polluted soil were selected for study. These strains were characterized on the basis of their 16S rDNA sequences and identified as Pseudomonas putida CC22, Enterobacter sakazakii CC24, Acinetobacter sp. CC30, and Acinetobacter sp. CC33. Strains were able to synthesize indole, solubilize phosphorus, and produce siderophores in vitro, which are proper characteristics of plant growth-promoting (PGP) bacteria. Bacteria were also able to bioaccumulate Cu(II), and most of them could use aromatic hydrocarbons as a sole carbon source. Furthermore, Acinetobacter sp. CC33 exhibited the greatest extent of Cu(II) accumulation, and CC30 the widest range for degrading hydrocarbons. Acinetobacter sp. CC30 was selected for pot experiments on the basis of its plant growth-promoting properties. Inoculation with CC30 significantly increased the plant biomass (dry weight and length of root and shoot) and improved the photosynthetic pigment content in non- and Cu-contaminated soil (p < 0.05). Additionally, plant Cu uptake was improved by CC30 inoculation showing a significantly enhanced root Cu content (p < 0.05). Our findings evidenced that the strain CC30 protected the plant against the deleterious effect of Cu contamination and improved the Cu extraction by plant, hence concluding that its inoculation represents an alternative to improve phytoremediation process of heavy metals, particularly Cu, in contaminated environments.
PLOS Genetics | 2018
Daniel Rojas-Tapias; John D. Helmann
Spx is a global transcriptional regulator present in low-GC Gram-positive bacteria, including the model bacterium Bacillus subtilis and various human pathogens. In B. subtilis, activation of Spx occurs in response to disulfide stress. We recently reported, however, that induction of Spx also occurs in response to cell wall stress, and that the molecular events that result in its activation under both stress conditions are mechanistically different. Here, we demonstrate that, in addition to up-regulation of spx transcription through the alternative sigma factor σM, full and timely activation of Spx-regulated genes by cell wall stress requires Spx stabilization by the anti-adaptor protein YirB. YirB is itself transcriptionally induced under cell wall stress, but not disulfide stress, and this induction requires the CssRS two-component system, which responds to both secretion stress and cell wall antibiotics. The yirB gene is repressed by YuxN, a divergently transcribed TetR family repressor, and CssR~P acts as an anti-repressor. Collectively, our results identify a physiological role for the YirB anti-adaptor protein and show that induction of the Spx regulon under disulfide and cell wall stress occurs through largely independent pathways.
Revista Argentina De Microbiologia | 2017
Felipe Romero-Perdomo; Jorge Abril; Mauricio Camelo; Andrés Moreno-Galván; Iván Pastrana; Daniel Rojas-Tapias; Ruth Bonilla
The aim of this research was to evaluate whether the application of two plant growth-promoting (rhizo)bacteria might reduce nitrogen fertilization doses in cotton. We used strains Azotobacter chroococcum AC1 and AC10 for their proven ability to promote seed germination and cotton growth. These microorganisms were characterized by their plant growth-promoting activities. Then, we conducted a glasshouse study to evaluate the plant growth promoting ability of these strains with reduced doses of urea fertilization in cotton. Results revealed that both strains are capable of fixing nitrogen, solubilizing phosphorus, synthesizing indole compounds and producing hydrolytic enzymes. After 12 weeks, the glasshouse experiment showed that cotton growth was positively influenced due to bacterial inoculation with respect to chemical fertilization. Notably, we observed that microbial inoculation further influenced plant biomass (p<0.05) than nitrogen content. Co-inoculation, interestingly, exhibited a greater beneficial effect on plant growth parameters compared to single inoculation. Moreover, similar results without significant statistical differences were observed among bacterial co-inoculation plus 50% urea and 100% fertilization. These findings suggest that co-inoculation of A. chroococcum strains allow to reduce nitrogen fertilization doses up to 50% on cotton growth. Our results showed that inoculation with AC1 and AC10 represents a viable alternative to improve cotton growth while decreasing the N fertilizer dose and allows to alleviate the environmental deterioration related to N pollution.
Applied Soil Ecology | 2012
Daniel Rojas-Tapias; Andrés Moreno-Galván; Sergio Pardo-Díaz; Melissa Obando; Diego Rivera; Ruth Bonilla
Water Air and Soil Pollution | 2014
Daniel Rojas-Tapias; Ruth Bonilla; Jenny Dussán
Universitas Scientiarum | 2013
Daniel Rojas-Tapias; Mabel Ortiz-Vera; Diego Rivera; Joseph Kloepper; Ruth Bonilla
Universitas Scientiarum | 2015
Daniel Rojas-Tapias; Oriana Ortega Sierra; Diego Rivera Botía; Ruth Bonilla
Corpoica Ciencia y Tecnología Agropecuaria | 2013
Andrés Moreno-Galván; Daniel Rojas-Tapias; Ruth Bonilla
Revista De Biologia Tropical | 2017
Sergio Pardo-Díaz; Daniel Rojas-Tapias; Fabio Roldan; Pedro F. B. Brandão; Edgar Almansa-Manrique
Universitas Scientiarum | 2016
Diego Rivera; Melissa Obando; Daniel Rojas-Tapias; Ruth Bonilla Buitrago; Helber Barbosa