Dante Pazzanese Duarte Lanna

Development and evaluation of a tropical feed library for the Cornell Net Carbohydrate and Rrotein System model

ABSTRACT: The Cornell Net Carbohydrate and Protein System (CNCPS) model has been increasinglyused in tropical regions for dairy and beef production. However, the lack of appropriate characterizationof the feeds has restricted its application. The objective of this study was to develop and evaluate afeed library containing feeds commonly used in tropical regions with characteristics needed as inputsfor the CNCPS. Feed composition data collected from laboratory databases and from experimentspublished in scientific journals were used to develop this tropical feed library. The total digestiblenutrients (TDN) predicted at 1x intake of maintenance requirement with the CNCPS model agreed withthose predicted by the Weiss et al. (1992) equation (r 2 of 92.7%, MSE of 13, and bias of 0.8%) over allfeeds. However, the regression r 2 of the tabular TDN values and the TDN predicted by the CNCPSmodel or with the Weiss equation were much lower (58.1 and 67.5%, respectively). A thoroughcomparison between observed and predicted TDN was not possible because of insufficient data tocharacterize the feeds as required by our models. When we used the mean chemical compositionvalues from the literature data, the TDN predicted by our models did not agree with the measuredvalues. We conclude using the TDN values calculated using the Weiss equation and the CNCPS modelthat are based on the actual chemical composition of the feeds result in energy values that moreaccurately represent the feeds being used in specific production situations than do the tabular values.Few papers published in Latin America journals that were used in this study reported information needby models such as the CNCPS.Key words: CNCPS, evaluation, feed library, tropical feeds

Genome-wide association study for intramuscular fat deposition and composition in Nellore cattle

BackgroundMeat from Bos taurus and Bos indicus breeds are an important source of nutrients for humans and intramuscular fat (IMF) influences its flavor, nutritional value and impacts human health. Human consumption of fat that contains high levels of monounsaturated fatty acids (MUFA) can reduce the concentration of undesirable cholesterol (LDL) in circulating blood. Different feeding practices and genetic variation within and between breeds influences the amount of IMF and fatty acid (FA) composition in meat. However, it is difficult and costly to determine fatty acid composition, which has precluded beef cattle breeding programs from selecting for a healthier fatty acid profile. In this study, we employed a high-density single nucleotide polymorphism (SNP) chip to genotype 386 Nellore steers, a Bos indicus breed and, a Bayesian approach to identify genomic regions and putative candidate genes that could be involved with deposition and composition of IMF.ResultsTwenty-three genomic regions (1-Mb SNP windows) associated with IMF deposition and FA composition that each explain ≥ 1% of the genetic variance were identified on chromosomes 2, 3, 6, 7, 8, 9, 10, 11, 12, 17, 26 and 27. Many of these regions were not previously detected in other breeds. The genes present in these regions were identified and some can help explain the genetic basis of deposition and composition of fat in cattle.ConclusionsThe genomic regions and genes identified contribute to a better understanding of the genetic control of fatty acid deposition and can lead to DNA-based selection strategies to improve meat quality for human consumption.

Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes

BackgroundEfficiency of feed utilization is important for animal production because it can reduce greenhouse gas emissions and improve industry profitability. However, the genetic basis of feed utilization in livestock remains poorly understood. Recent developments in molecular genetics, such as platforms for genome-wide genotyping and sequencing, provide an opportunity to identify genes and pathways that influence production traits. It is known that transcriptional networks influence feed efficiency-related traits such as growth and energy balance. This study sought to identify differentially expressed genes in animals genetically divergent for Residual Feed Intake (RFI), using RNA sequencing methodology (RNA-seq) to obtain information from genome-wide expression profiles in the liver tissues of Nelore cattle.ResultsDifferential gene expression analysis between high Residual Feed Intake (HRFI, inefficient) and low Residual Feed Intake (LRFI, efficient) groups was performed to provide insights into the molecular mechanisms that underlie feed efficiency-related traits in beef cattle. A total of 112 annotated genes were identified as being differentially expressed between animals with divergent RFI phenotypes. These genes are involved in ion transport and metal ion binding; act as membrane or transmembrane proteins; and belong to gene clusters that are likely related to the transport and catalysis of molecules through the cell membrane and essential mechanisms of nutrient absorption. Genes with functions in cellular signaling, growth and proliferation, cell death and survival were also differentially expressed. Among the over-represented pathways were drug or xenobiotic metabolism, complement and coagulation cascades, NRF2-mediated oxidative stress, melatonin degradation and glutathione metabolism.ConclusionsOur data provide new insights and perspectives on the genetic basis of feed efficiency in cattle. Some previously identified mechanisms were supported and new pathways controlling feed efficiency in Nelore cattle were discovered. We potentially identified genes and pathways that play key roles in hepatic metabolic adaptations to oxidative stress such as those involved in antioxidant mechanisms. These results improve our understanding of the metabolic mechanisms underlying feed efficiency in beef cattle and will help develop strategies for selection towards the desired phenotype.

Utilização do Bagaço de Cana-de-Açúcar em Dietas com Elevada Proporção de Concentrados para Novilhos Nelore em Confinamento

The objective of this work was to evaluate the performance and carcass characteristics of cattle fed high concentrate diets containing 15, 21 or 27% of sugarcane bagasse in the dry matter. Twenty-four Nellore steers with 279 kg of shrunk body weight and 24 months of age, two per pen, were fed for 98 days. No significant effects were observed for average daily gain (mean =1.461 kg) and feed efficiency among the treatments. It was observed a linear effect between dry matter intake and levels of bagasse, with greater intake in treatments with lower proportion of bagasse. Consistent with intake, the liver weight presented linear association with bagasse levels, with higher weight in treatments with more concentrate. The hot carcass weight, kidney, pelvic, heart and inguinal fat, ribeye area and fat thickness were no different between treatments. However, it was observed a linear association between dressing percentage and bagasse levels, with higher percentage in treatments with more concentrate, consistent with the energy level of the diet. The results showed the viability of the use of 15 or 21% of sugarcane bagasse as the only roughage in high concentrate diets with corn, citrus pulp and soybean meal for Nellore steers in feedlot.

Putative Regulatory Factors Associated with Intramuscular Fat Content

Intramuscular fat (IMF) content is related to insulin resistance, which is an important prediction factor for disorders, such as cardiovascular disease, obesity and type 2 diabetes in human. At the same time, it is an economically important trait, which influences the sensorial and nutritional value of meat. The deposition of IMF is influenced by many factors such as sex, age, nutrition, and genetics. In this study Nellore steers (Bos taurus indicus subspecies) were used to better understand the molecular mechanisms involved in IMF content. This was accomplished by identifying differentially expressed genes (DEG), biological pathways and putative regulatory factors. Animals included in this study had extreme genomic estimated breeding value (GEBV) for IMF. RNA-seq analysis, gene set enrichment analysis (GSEA) and co-expression network methods, such as partial correlation coefficient with information theory (PCIT), regulatory impact factor (RIF) and phenotypic impact factor (PIF) were utilized to better understand intramuscular adipogenesis. A total of 16,101 genes were analyzed in both groups (high (H) and low (L) GEBV) and 77 DEG (FDR 10%) were identified between the two groups. Pathway Studio software identified 13 significantly over-represented pathways, functional classes and small molecule signaling pathways within the DEG list. PCIT analyses identified genes with a difference in the number of gene-gene correlations between H and L group and detected putative regulatory factors involved in IMF content. Candidate genes identified by PCIT include: ANKRD26, HOXC5 and PPAPDC2. RIF and PIF analyses identified several candidate genes: GLI2 and IGF2 (RIF1), MPC1 and UBL5 (RIF2) and a host of small RNAs, including miR-1281 (PIF). These findings contribute to a better understanding of the molecular mechanisms that underlie fat content and energy balance in muscle and provide important information for the production of healthier beef for human consumption.

Identification of genomic regions associated with feed efficiency in Nelore cattle

BackgroundFeed efficiency is jointly determined by productivity and feed requirements, both of which are economically relevant traits in beef cattle production systems. The objective of this study was to identify genes/QTLs associated with components of feed efficiency in Nelore cattle using Illumina BovineHD BeadChip (770 k SNP) genotypes from 593 Nelore steers. The traits analyzed included: average daily gain (ADG), dry matter intake (DMI), feed-conversion ratio (FCR), feed efficiency (FE), residual feed intake (RFI), maintenance efficiency (ME), efficiency of gain (EG), partial efficiency of growth (PEG) and relative growth rate (RGR). The Bayes B analysis was completed with Gensel software parameterized to fit fewer markers than animals. Genomic windows containing all the SNP loci in each 1 Mb that accounted for more than 1.0% of genetic variance were considered as QTL region. Candidate genes within windows that explained more than 1% of genetic variance were selected by putative function based on DAVID and Gene Ontology.ResultsThirty-six QTL (1-Mb SNP window) were identified on chromosomes 1, 2, 3, 5, 6, 7, 8, 9, 10, 12, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25 and 26 (UMD 3.1). The amount of genetic variance explained by individual QTL windows for feed efficiency traits ranged from 0.5% to 9.07%. Some of these QTL minimally overlapped with previously reported feed efficiency QTL for Bos taurus. The QTL regions described in this study harbor genes with biological functions related to metabolic processes, lipid and protein metabolism, generation of energy and growth. Among the positional candidate genes selected for feed efficiency are: HRH4, ALDH7A1, APOA2, LIN7C, CXADR, ADAM12 and MAP7.ConclusionsSome genomic regions and some positional candidate genes reported in this study have not been previously reported for feed efficiency traits in Bos indicus. Comparison with published results indicates that different QTLs and genes may be involved in the control of feed efficiency traits in this Nelore cattle population, as compared to Bos taurus cattle.

Conjugated linoleic acid (CLA) effects on pups growth, milk composition and lipogenic enzymes in lactating rats.

Conjugated linoleic acid (CLA) has a range of biological properties, including effects on lipid metabolism, milk and body composition in animals. This study investigated the effects of dietary CLA on lactating rats and development of the suckling pups. Dams were fed either a control diet or the same diet supplemented with 25 g/kg of a fat supplement containing 540 g CLA/kg (final concentration of 13.5 g CLA/kg diet) from parturition to the 15th day post-partum. The CLA mixture used in this study contained the following isomers (per 100 g): cis-9, trans-11 (24 g); cis-10, trans-12 (35 g); cis-8, trans-10 (15 g); cis-11, trans-13 (17 g) and others (9 g). On d 15 post partum, CLA supplementation reduced milk fat content by 33% and pup growth by 21%. The milk fatty acid profile, with decreased content of short and medium chain acids, suggests CLA inhibition was more pronounced for de novo lipid synthesis. Consistent with these results, activities of fatty acid synthase, glucose 6-phosphate dehydrogenase and 6-phosphogluconate dehydrogenase were reduced by CLA treatment in the mammary gland and liver. In contrast, the activity of NADP-malate dehydrogenase was unchanged.

Desempenho de Tourinhos Cruzados em Dietas de Alto Teor de Concentrado com Bagaço de Cana-de-Açúcar como Único Volumoso

The objective of this work was to evaluate the performance of ¾ European x ¼ Zebu crossbred bulls of British or Continental paternal breed, fed high concentrate diets containing 9, 15 or 21% of the dry matter (DM) with sugarcane bagasse (BIN) in a 2 x 3 factorial arrangement. Thirty-six crossbred bulls, 9 months old and 257 kg of shrink body weight were fed, two per pen, for 139 days. There was no difference in shrink body weight gain between the two genetic groups, the British animals gaining 1.24 kg/d and the Continentals 1.29 kg/d. The efficiency of feed conversion was also the same, 0.17. The 15% BIN animals showed higher rates of gain (1.36 kg/d) than the 9% BIN animals (1.20 kg/d). The final weight of the British animals (428.1 kg) did not differ from the Continental bulls (438.4 kg) as well as the dry matter intake (respectively 7.20; 7.54 kg/d). Among the three roughage levels, the highest final weight was for the 15% BIN animals (448.7 kg), the lowest for the 21% BIN(424.8 kg). The highest dry matter intake was for the 15% BIN treatment (7.93 kg DM/d) and the lowest for the 9% BIN (6.85 kg DM/d). These results suggest that high concentrate diets with levels as low as 9% of BIN can be used.

Perfil de ácidos graxos do leite de vacas alimentadas com óleo de soja e monensina no início da lactação

ABSTRACT - The objective of this trial was to evaluate the effects of dietary monensin and soybean oil on milk fatty acid(FA) profile in the 5 th and 15 th week of lactation of dairy cows. Sixteen multiparous crossbred dairy cows averaging 30 days inmilk were assigned to a completely randomized block design in a 2 x 2 factorial arrangement (presence or absence of monensinand soybean oil). The following diets were used: control not supplemented with monensin or soybean oil (CT), 33 ppm of monensin(MN), 3.9% of soybean oil (OL) or a combination of soybean oil plus monensin (OM). Cows were confined and fed diets with52% of corn silage and 48% of concentrate. No significant interaction between soybean oil and monensin was observed for anymeasured FA. Monensin increased unsaturated, monounsaturated, and polyunsaturated FA by 9.0, 8.8 and 10.7%, respectively,while supplementation with soybean oil resulted in greater responses: 39.2, 39.3, and 24.2% for the same FA. Soybean oil alsoreduced short chain FA (43.7%) and medium chain FA (49.1%) and increased long chain FA (55.3%) in this study. The isomers

Cow/calf preweaning efficiency of Nellore and Bos taurus x Bos indicus crosses.

The objectives of this study were to determine if percentage Bos taurus (0 or 50%) of the cow had an effect on ME requirements and milk production, and to compare cow/calf efficiency among 3 mating systems. Metabolizable energy requirements were estimated during a feeding trial that encompassed a gestation and lactation feeding trial for each of 2 groups of cows. Cows were 0 or 50% Bos taurus (100 or 50% Nellore) breed type: Nellore cows (NL; n = 10) mated to Nellore bulls, NL cows (n = 9) mated to Angus bulls, Angus x Nellore (ANL; n = 10) and Simmental x Nellore (SNL; n = 10) cows mated to Canchim (5/8 Charolais 3/8 Zebu) bulls. Cows were individually fed a total mixed diet that contained 11.3% CP and 2.23 Mcal of ME/kg of DM. At 14-d intervals, cows and calves were weighed and the amount of DM was adjusted to keep shrunk BW and BCS of cows constant. Beginning at 38 d of age, corn silage was available to calves ad libitum. Milk production at 42, 98, 126, and 180 d postpartum was measured using the weigh-suckle-weigh technique. At 190 d of age, calves were slaughtered and body composition estimated using 9-10-11th-rib section to obtain energy deposition. Regression of BW change on daily ME intake (MEI) was used to estimate MEI at zero BW change. Increase in percentage Bos taurus had a significant effect on daily ME requirements (Mcal/d) during pregnancy (P < 0.01) and lactation (P < 0.01). Percentage Bos taurus had a positive linear effect on maintenance requirements of pregnant (P = 0.07) and lactating (P < 0.01) cows; during pregnancy, the ME requirements were 91 and 86% of those in lactation (131 +/- 3.5 vs. 145 +/- 3.4 Mcal x kg(-0.75) x d(-1)) for the 0 and 50% B. taurus groups, respectively. The 50% B. taurus cows, ANL and SNL, suckling crossbred calves had greater total MEI (4,319 +/- 61 Mcal; P < 0.01) than 0% B. taurus cows suckling NL (3,484 +/- 86 Mcal) or ANL calves (3,600 +/- 91 Mcal). The 0% B. taurus cows suckling ANL calves were more efficient (45.3 +/- 1.6 g/Mcal; P = 0.03) than straightbred NL (35.1 +/- 1.5 g/Mcal) and ANL or SNL pairs (41.0 +/- 1.0 g/Mcal). Under the conditions of this study, crossbreeding improved cow/ calf efficiency and showed an advantage for cows that have lower energy requirements.