Darren M. Parsons

Diurnal and tidal movements of snapper (Pagrus auratus, Sparidae) in an estuarine environment

Using individually coded acoustic transponders and an array of 15 moored receivers (detection range ∼300 m), the temporal and spatial movements of the temperate snapper Pagrus auratus (Sparidae) were studied within an estuary. Of the 28 fish initially tagged, 20 were subsequently detected within the study area for up to 70 days. The spatial scale of daily movements was in the order of hundreds of metres for most fish, suggesting relatively restricted home ranges over the period monitored (November-January). The detectability of fish remaining in the estuary was lower at night, probably because of fish moving out of the main channel and onto surrounding shallow banks during darkness. Temporal movement patterns detected using spectral analyses (Fast Fourier Transforms) were predominantly diurnal, with subordinate tidal behaviour also evident in some fish. These results demonstrate that in this system, snapper occupy relatively small (hundreds of metres) and discrete areas of soft sediment seafloor, within which repeated, predictable movements are made. Variability among fish has highlighted the need for a better understanding of the relationship between fish behaviour and fine-scale habitat features (metres).

Evidence for long-term site fidelity of snapper (Pagrus auratus) within a marine reserve

Abstract Increases in the density of exploited species on unfished reefs logically implies that some individuals are at least temporarily resident, or show fidelity to a particular area. We tagged snapper (Pagrus auratus (Bloch & Schneider 1801)) in the Leigh Marine Reserve, New Zealand using visible implant fluorescent elastomer tags, recoverable by diver visual sightings without the need to recapture the fish. Batch tagging of snapper (n = 907) was done during an angling survey in June and December 1996, and individually coded tags were implanted by divers (n = 117) in January 1999. Snapper tagged during both programmes were recovered on irregular intervals from 1997 to 2000. There were 71 recoveries of batch tags within 500 m of their tagging sites, and these recoveries were still being made >3 years after tagging: Of individually coded fish, 49 (42%) were seen, sometimes repeatedly over several months, close to their respective tagging sites. These observations included snapper as small as 23 cm fork length, contradicting the commonly held impression that only large snapper take up long‐term residency on reefs. This preliminary evidence suggests that some snapper exhibit site fidelity to areas only a few hundred metres wide, and in the absence of fishing may occupy the same area for years.

Habitat complexity and predation risk determine juvenile snapper (Pagrus auratus) and goatfish (Upeneichthys lineatus) behaviour and distribution

Early research into the distribution of juvenile snapper (Pagrus auratus) indicated that complex habitats were not important during early life stages. Recent studies in soft-sediment environments, however, have shown juvenile snapper to be more abundant in areas of complex habitat. No previous studies have investigated how and why this species uses both reef and soft-sediment habitats. Therefore, we examined the role of topographic complexity in influencing juvenile snapper distribution and habitat use, providing both field and laboratory evidence for the importance of complex benthic habitats for juvenile snapper and goatfish (Upeneichthys lineatus). Underwater visual censuses showed both species to be most abundant over sand flats adjacent to rocky reef habitats, a distribution that may balance the requirements of food acquisition and predator avoidance. In aquaria experiments, where juvenile snapper were given a choice between habitat with and without shelter, the use of shelter habitat increased significantly in the presence of a predatory threat. This demonstration of the use of complex habitat as shelter highlights the importance of benthic complexity for juvenile snapper and suggests that the management of essential habitats could enhance juvenile survivorship and should have an important role to play in sustainable management of exploited species.

Risks of shifting baselines highlighted by anecdotal accounts of New Zealand's snapper (Pagrus auratus) fishery

Abstract Anecdotal data sources may constitute an important component of the information available about an exploited species, as record keeping may not have occurred until after exploitation began. Here, we aimed to fill any gaps in the exploitative history of the sparid snapper (Pagrus auratus), using social and historical research methods. Social research consisted of interviews with recreational fishers, focusing on the most and largest snapper they had caught. In addition, the diary‐logs of two recreational fishers were analysed. Historical research consisted of investigation of old books, photos, archives and unpublished sources unconventional to fishery science. Interviews with fishers demonstrated no or weak trends in snapper abundance or size, and were likely impeded by a lack of ability to detect change in a fish stock that may still be considered abundant. The fishers’ perception of change, however, largely reflected recent experiences (last c. 10 years), when biomass is understood to have increased, and mostly did not consider experiences before the 1980s. Alternatively, diary‐logs of fisher catch rates produced a pattern that matched formal stock assessments of snapper biomass, suggesting declines in abundance up until the 1990s and an increase in biomass after that time. Historical research, although more qualitative, had the ability to investigate periods where formal records were not kept and described a fishery vastly different from the current one. Snapper were easily caught, in great abundance and in unusual locations. Localised depletion of snapper was first noticed in the early 20th century, despite spectacular catches of snapper occurring after that time. Snapper behaviour was also likely different, with visual sightings of snapper by onlookers a common occurrence. Although predictions from stock assessment models are consistent with that of the anecdotes listed here (i.e., high biomass in the past), these anecdotes are valuable as they explain lost biomass in a perspective meaningful to all. This perspective may be valuable for managers trying to consider the non‐financial value of a shared fishery but, if unrecognised, represents a shifting baseline.

Snapper (Chrysophrys auratus): a review of life history and key vulnerabilities in New Zealand

Snapper (Chrysophrys auratus) is an important coastal fish species in New Zealand for a variety of reasons, but the large amount of research conducted on snapper has not been reviewed. Here, we review life history information and potential threats for snapper in New Zealand. We present information on snapper life history, defining stages (eggs and larvae, juvenile and adult), and assess potential threats and knowledge gaps. Overall we identify six key points: 1. post-settlement snapper are highly associated with certain estuarine habitats that are under threat from land-based stressors. This may serve as a bottleneck for snapper populations; 2. the largest knowledge gaps relate to the eggs and larvae. Additional knowledge may help to anticipate the effects of climate change, which will likely have the greatest influence on these early life stages; 3. ocean acidification, from land-based sources and from climate change, may be an important threat to larval snapper; 4. a greater understanding of population connectivity would improve certainty around the sustainability of fishery exploitation; 5. the collateral effects of fishing are likely to be relevant to fishery productivity, ecosystem integrity and enduser value; 6. our understanding of the interrelationships between snapper and other ecosystem components is still deficient.

Mussel reefs on soft sediments: a severely reduced but important habitat for macroinvertebrates and fishes in New Zealand

Green-lipped mussels (Perna canaliculus) formed extensive reefs on soft sediments in sheltered embayments around northern New Zealand until overfishing and/or increased sediment input caused their virtual disappearance by 1980. To determine the role of mussel reefs as habitat for other animals, we located remnant soft-sediment reefs in five locations and compared the density, biomass, productivity and composition of mobile macroinvertebrate communities, and the density of small fishes associated with mussels, with fauna in the surrounding soft sediments. The mussel reefs had a distinct assemblage of macroinvertebrates, which had 3.5 times the density, 3.4 times the biomass and 3.5 times the productivity of surrounding areas. The density of small fishes was 13.7 times higher than in surrounding areas. These results show that soft-sediment mussel reefs support an abundant and productive fauna, highlighting the probable large loss of productivity associated with the historical decline in mussel habitat and the consequent desirability of restoration efforts.

Mechanisms Explaining Nursery Habitat Association: How Do Juvenile Snapper (Chrysophrys auratus) Benefit from Their Nursery Habitat?

Nursery habitats provide elevated survival and growth to the organisms that associate with them, and as such are a crucial early life-stage component for many fishes and invertebrates. The exact mechanisms by which these benefits are afforded to associated organisms, however, are often unclear. Here we assessed potential explanations of the nursery function of structurally complex habitats for post-settlement snapper, Chrysophrys auratus, in New Zealand. Specifically, we deployed Artificial Seagrass Units (ASUs) and used a combination of video observation, netting and diet analysis of associated post-settlement snapper as well describing potential prey within the micro-habitats surrounding ASUs. We did not observe any predation attempts and few potential predators, suggesting that for snapper the nursery value of structurally complex habitats is not as a predation refuge. The diet of post-settlement snapper mostly consisted of calanoid and cyclopoid copepods, which were most commonly sampled from within the water column. Nearly all suspected feeding events were also observed within the water column. When considering the velocity of water flow at each ASU, plankton sampling revealed a greater availability of copepods with increasing current strength, while netting and video observation demonstrated that the abundance of snapper was highest at sites with intermediate water velocity. This study highlights that the interaction between water flow and food availability may represent an important trade-off between energy expenditure and food intake for post-settlement snapper. Structurally complex habitats may mediate this relationship, allowing snapper to access sites with higher food availability while reducing swimming costs. This mechanism may have broader relevance, potentially explaining the importance of estuarine nursery habitats for other species.

The influence of habitat availability on juvenile fish abundance in a northeastern New Zealand estuary

Management of fish populations is often focused on the exploitation of adult fish. Maintaining the habitat requirements of all life stages may also be an important consideration. We investigated the value of structured habitat to juvenile fishes within a northeastern New Zealand harbour using artificial seagrass units (ASUs). Specifically, we deployed ASUs across treatments with high vs. low habitat manipulations. We hypothesised that if the abundance of recruiting juvenile fishes was greater on the high habitat availability treatments this would suggest that the availability of habitat was limiting juvenile fish abundance. Our analyses were focused on the four most abundant fishes that settled on our ASUs: snapper (Pagrus auratus); spotty (Notolabrus celidotus); trevally (Pseudocaranx dentex); and an assemblage of pipefish species. For snapper, spotty and pipefish, abundance was greater on the high habitat availability treatments. This result would be unlikely to occur if the availability of juvenile fishes was limiting, suggesting that juvenile fish abundance is more likely to be limited by habitat. In terms of spatial gradients, spotty abundance and size increased with distance into the harbour. The spatial gradient present for spotty indicates the importance of placing the habitat dependency of juvenile fish into a landscape context. Overall, these results demonstrate that maintaining structured habitats may be an important consideration for some valuable inshore fish populations in northeastern New Zealand.

Ocean acidification in New Zealand waters: trends and impacts

ABSTRACT The threat posed by ocean acidification (OA) to the diversity and productivity of New Zealand marine ecosystems is assessed in a synthesis of published trends and impacts. A 20-year time series in Subantarctic water, and a national coastal monitoring programme, provide insight into pH variability, and context for experimental design, modelling and projections. A review of the potential impact of changes in the carbonate system on the major phyla in New Zealand waters confirms international observations that calcifying organisms, and particularly their early life-history stages, are vulnerable. The synthesis considers ecosystem and socio-economic impacts, and identifies current knowledge gaps and future research directions, including mechanistic studies of OA sensitivity. Advanced ecosystem models of OA, that incorporate the indirect effects of OA and interactions with other climate stressors, are required for robust projection of the future status of New Zealand marine ecosystems.

Relative abundance of snapper (Chrysophrys auratus) across habitats within an estuarine system

ABSTRACT Many fish species rely on estuarine nursery habitats as they transition to adult life stages. Quantifying nursery value, however, requires identification of the life stages (often small and short-lived) that utilise nursery habitats, and survey methods that provide comparable estimates across habitats. We focused our surveys on post-settlement snapper (Chrysophrys auratus) using video camera deployments across habitats within a northeastern New Zealand harbour. Post-settlement snapper abundance was higher among structured habitat types relative to bare sediments, with the type of structured habitat not influential. The exception appeared to be for reef habitat (although sampling was limited). Reef sites were structurally complex, but largely inhabited by older life stages (snapper and other fish species). Overall, nursery value for snapper appears to be connected to structure, rather than structure type. This result emphasises the importance of a broadened scope to coastal fishery management, one that incorporates not just fish extraction, but also habitat maintenance or restoration.