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Dive into the research topics where Darwin Babino is active.

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Featured researches published by Darwin Babino.


Biochimica et Biophysica Acta | 2012

Mammalian carotenoid-oxygenases: key players for carotenoid function and homeostasis.

Glenn P. Lobo; Jaume Amengual; Grzegorz Palczewski; Darwin Babino; Johannes von Lintig

Humans depend on a dietary intake of lipids to maintain optimal health. Among various classes of dietary lipids, the physiological importance of carotenoids is still controversially discussed. On one hand, it is well established that carotenoids, such as β,β-carotene, are a major source for vitamin A that plays critical roles for vision and many aspects of cell physiology. On the other hand, large clinical trials have failed to show clear health benefits of carotenoids supplementation and even suggest adverse health effects in individuals at risk of disease. In recent years, key molecular players for carotenoid metabolism have been identified, including an evolutionarily well conserved family of carotenoid-oxygenases. Studies in knockout mouse models for these enzymes revealed that carotenoid metabolism is a highly regulated process and that this regulation already takes place at the level of intestinal absorption. These studies also provided evidence that β,β-carotene conversion can influence retinoid-dependent processes in the mouse embryo and in adult tissues. Moreover, these analyses provide an explanation for adverse health effects of carotenoids by showing that a pathological accumulation of these compounds can induce oxidative stress in mitochondria and cell signaling pathways related to disease. Advancing knowledge about carotenoid metabolism will contribute to a better understanding of the biochemical and physiological roles of these important micronutrients in health and disease. This article is part of a Special Issue entitled Retinoid and Lipid Metabolism.


Development | 2012

BCDO2 acts as a carotenoid scavenger and gatekeeper for the mitochondrial apoptotic pathway

Glenn P. Lobo; Andrea Isken; Sylvia Hoff; Darwin Babino; Johannes von Lintig

Carotenoids and their metabolites are widespread and exert key biological functions in living organisms. In vertebrates, the carotenoid oxygenase BCMO1 converts carotenoids such as β,β-carotene to retinoids, which are required for embryonic pattern formation and cell differentiation. Vertebrate genomes encode a structurally related protein named BCDO2 but its physiological function remains undefined. Here, we show that BCDO2 is expressed as an oxidative stress-regulated protein during zebrafish development. Targeted knockdown of this mitochondrial enzyme resulted in anemia at larval stages. Marker gene analysis and staining for hemoglobin revealed that erythropoiesis was not impaired but that erythrocytes underwent apoptosis in BCDO2-deficient larvae. To define the mechanism of this defect, we have analyzed the role of BCDO2 in human cell lines. We found that carotenoids caused oxidative stress in mitochondria that eventually led to cytochrome c release, proteolytic activation of caspase 3 and PARP1, and execution of the apoptotic pathway. Moreover, BCDO2 prevented this induction of the apoptotic pathway by carotenoids. Thus, our study identifying BCDO2 as a crucial protective component against oxidative stress establishes this enzyme as mitochondrial carotenoid scavenger and a gatekeeper of the intrinsic apoptotic pathway.


Journal of Biological Chemistry | 2015

Characterization of the role of β-carotene 9,10-dioxygenase in macular pigment metabolism

Darwin Babino; Grzegorz Palczewski; M. Airanthi K. Widjaja-Adhi; Philip D. Kiser; Marcin Golczak; Johannes von Lintig

Background: BCO2 converts xanthophylls in rodents, but it is controversial whether this role is conserved in primates. Results: Recombinant primate BCO2 displays enzymatic activity and is expressed as an oxidative stress-induced mitochondrial protein. Conclusion: Primate BCO2 displays a conserved structural fold and enzymatic function. Significance: Our data suggest that inducible carotenoid breakdown systems are conserved in primates. A family of enzymes collectively referred to as carotenoid cleavage oxygenases is responsible for oxidative conversion of carotenoids into apocarotenoids, including retinoids (vitamin A and its derivatives). A member of this family, the β-carotene 9,10-dioxygenase (BCO2), converts xanthophylls to rosafluene and ionones. Animals deficient in BCO2 highlight the critical role of the enzyme in carotenoid clearance as accumulation of these compounds occur in tissues. Inactivation of the enzyme by a four-amino acid-long insertion has recently been proposed to underlie xanthophyll concentration in the macula of the primate retina. Here, we focused on comparing the properties of primate and murine BCO2s. We demonstrate that the enzymes display a conserved structural fold and subcellular localization. Low temperature expression and detergent choice significantly affected binding and turnover rates of the recombinant enzymes with various xanthophyll substrates, including the unique macula pigment meso-zeaxanthin. Mice with genetically disrupted carotenoid cleavage oxygenases displayed adipose tissue rather than eye-specific accumulation of supplemented carotenoids. Studies in a human hepatic cell line revealed that BCO2 is expressed as an oxidative stress-induced gene. Our studies provide evidence that the enzymatic function of BCO2 is conserved in primates and link regulation of BCO2 gene expression with oxidative stress that can be caused by excessive carotenoid supplementation.


Molecular Pharmacology | 2011

Dietary 9-cis-β,β-carotene fails to rescue vision in mouse models of leber congenital amaurosis

Tadao Maeda; Lindsay Perusek; Jaume Amengual; Darwin Babino; Krzysztof Palczewski; Johannes von Lintig

Synthetic 9-cis-stereoisomers of vitamin A (all-trans-retinol) are especially promising agents for the fight against blinding diseases. Several studies suggested that 9-cis-β,β-carotene (9-cis-BC), a natural and abundant β-carotene isomer in the diet, could be the precursor of 9-cis-retinoids and thus could have therapeutic applications. Here we showed that 9-cis-BC is metabolized both in vitro and in vivo by two types of mouse carotenoid oxygenases, β,β-Carotene monooxygenase 1 (BCMO1), and β,β-carotene dioxygenase 2 (BCDO2). In the symmetric oxidative cleavage reaction at C15,C15′ position by BCMO1, part of the 9-cis-double bond was isomerized to the all-trans-stereoisomer, yielding all-trans-retinal and 9-cis-retinal in a molar ratio of 3:1. The asymmetric cleaving enzyme BCDO2 preferentially removed the 9-cis-ring site at the C9,C10 double bond from this substrate, providing an all-trans-β-10′-apocarotenal product that can be further metabolized to all-trans-retinal by BCMO1. Studies in knockout mouse models confirmed that each carotenoid oxygenase can metabolize 9-cis-BC. Therefore, treatment of mouse models of Leber congenital amaurosis with 9-cis-BC and 9-cis-retinyl-acetate, a well established 9-cis-retinal precursor, showed that the cis-carotenoid was far less effective than the cis-retinoid in rescuing vision. Thus, our in vitro and in vivo studies revealed that 9-cis-BC is not a major source for mouse 9-cis-retinoid production but is mainly converted to all-trans-retinoids to support canonical vitamin A action.


American Journal of Human Genetics | 2017

Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies

Mingchu Xu; Yajing (Angela) Xie; Hana Abouzeid; Christopher T. Gordon; Alessia Fiorentino; Zixi Sun; Anna Lehman; Ihab S. Osman; Rachayata Dharmat; Rosa Riveiro-Alvarez; Linda Bapst-Wicht; Darwin Babino; Gavin Arno; Virginia Busetto; Li Zhao; Hui Li; Miguel A. Lopez-Martinez; Liliana F. Azevedo; Laurence Hubert; Nikolas Pontikos; Aiden Eblimit; Isabel Lorda-Sanchez; Valeria Kheir; Vincent Plagnol; Myriam Oufadem; Zachry T. Soens; Lizhu Yang; Christine Bole-Feysot; Rolph Pfundt; Nathalie Allaman-Pillet

Pre-mRNA splicing factors play a fundamental role in regulating transcript diversity both temporally and spatially. Genetic defects in several spliceosome components have been linked to a set of non-overlapping spliceosomopathy phenotypes in humans, among which skeletal developmental defects and non-syndromic retinitis pigmentosa (RP) are frequent findings. Here we report that defects in spliceosome-associated protein CWC27 are associated with a spectrum of disease phenotypes ranging from isolated RP to severe syndromic forms. By whole-exome sequencing, recessive protein-truncating mutations in CWC27 were found in seven unrelated families that show a range of clinical phenotypes, including retinal degeneration, brachydactyly, craniofacial abnormalities, short stature, and neurological defects. Remarkably, variable expressivity of the human phenotype can be recapitulated in Cwc27 mutant mouse models, with significant embryonic lethality and severe phenotypes in the complete knockout mice while mice with a partial loss-of-function allele mimic the isolated retinal degeneration phenotype. Our study describes a retinal dystrophy-related phenotype spectrum as well as its genetic etiology and highlights the complexity of the spliceosomal gene network.


The FASEB Journal | 2015

The role of 11-cis-retinyl esters in vertebrate cone vision

Darwin Babino; Brian D Perkins; Aljoscha Kindermann; Vitus Oberhauser; Johannes von Lintig

A cycle of cis‐to‐trans isomerization of the chromophore is intrinsic to vertebrate vision where rod and cone photoreceptors mediate dim‐ and bright‐light vision, respectively. Daylight illumination can greatly exceed the rate at which the photoproduct can be recycled back to the chromophore by the canonical visual cycle. Thus, an additional supply pathway(s) must exist to sustain cone‐dependent vision. Two‐photon microscopy revealed that the eyes of the zebrafish (Danio rerio) contain high levels of 11‐cis‐retinyl esters (11‐REs) within the retinal pigment epithelium. HPLC analyses demonstrate that 11‐REs are bleached by bright light and regenerated in the dark. Pharmacologic treatment with all‐trans‐retinylamine (Ret‐NH2), a potent and specific inhibitor of the trans‐to‐cis reisomerization reaction of the canonical visual cycle, impeded the regeneration of 11‐REs. Intervention with 11‐cis‐retinol restored the regeneration of 11‐REs in the presence of all‐trans‐Ret‐NH2. We used the XOPS:mCFP transgenic zebrafish line with a functional cone‐only retina to directly demonstrate that this 11‐RE cycle is critical to maintain vision under bright‐light conditions. Thus, our analyses reveal that a dark‐generated pool of 11‐REs helps to supply photoreceptors with the chromophore under the varying light conditions present in natural environments—Babino, D., Perkins, B. D., Kindermann, A., Oberhauser, V., von Lintig, J., The role of 11‐cis‐retinyl esters in vertebrate cone vision. FASEB J. 29, 216–226 (2015). www.fasebj.org


PLOS ONE | 2015

Nmnat1-rbp7 is a conserved fusion-protein that combines NAD+ catalysis of nmnat1 with subcellular localization of rbp7

Hao Chen; Darwin Babino; Stefan A. Schoenbichler; Valeryia Arkhipova; Sonja Töchterle; Fabian Martin; Christian W. Huck; Johannes von Lintig; Dirk Meyer

Retinol binding proteins (Rbps) are known as carriers for transport and targeting of retinoids to their metabolizing enzymes. Rbps are also reported to function in regulating the homeostatic balance of retinoid metabolism, as their level of retinoid occupancy impacts the activities of retinoid metabolizing enzymes. Here we used zebrafish as a model to study rbp7a function and regulation. We find that early embryonic rbp7a expression is negatively regulated by the Nodal/FoxH1-signaling pathway and we show that Nodal/FoxH1 activity has the opposite effect on aldh1a2, which encodes the major enzyme for early embryonic retinoic acid production. The data are consistent with a Nodal-dependent coordination of the allocation of retinoid precursors to processing enzymes with the catalysis of retinoic acid formation. Further, we describe a novel nmnat1-rbp7 transcript encoding a fusion of Rbp7 and the NAD+ (Nicotinamide adenine dinucleotide) synthesizing enzyme Nmnat1. We show that nmnat1-rbp7 is conserved in fish, mouse and chicken, and that in zebrafish regulation of nmnat1-rbp7a is distinct from that of rbp7a and nmnat1. Injection experiments in zebrafish further revealed that Nmnat1-Rbp7a and Nmnat1 have similar NAD+ catalyzing activities but a different subcellular localization. HPLC measurements and protein localization analysis highlight Nmnat1-Rbp7a as the only known cytoplasmic and presumably endoplasmic reticulum (ER) specific NAD+ catalyzing enzyme. These studies, taken together with previously documented NAD+ dependent interaction of RBPs with ER-associated enzymes of retinal catalysis, implicate functions of this newly described NMNAT1-Rbp7 fusion protein in retinol oxidation.


Archives of Biochemistry and Biophysics | 2013

Characterization of human β,β-carotene-15,15'-monooxygenase (BCMO1) as a soluble monomeric enzyme.

Thomas Kowatz; Darwin Babino; Philip D. Kiser; Krzysztof Palczewski; Johannes von Lintig


ACS Chemical Biology | 2016

The Biochemical Basis of Vitamin A3 Production in Arthropod Vision

Darwin Babino; Marcin Golczak; Philip D. Kiser; Adrian Wyss; Krzysztof Palczewski; Johannes von Lintig


Biochemistry | 2016

Structural Insights into the Drosophila melanogaster Retinol Dehydrogenase, a Member of the Short-Chain Dehydrogenase/Reductase Family.

Lukas Hofmann; Yaroslav Tsybovsky; Nathan S. Alexander; Darwin Babino; Nicole Y. Leung; Craig Montell; Surajit Banerjee; Johannes von Lintig; Krzysztof Palczewski

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Johannes von Lintig

Case Western Reserve University

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Krzysztof Palczewski

Case Western Reserve University

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Philip D. Kiser

Case Western Reserve University

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Glenn P. Lobo

Case Western Reserve University

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Grzegorz Palczewski

Case Western Reserve University

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Jaume Amengual

Case Western Reserve University

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Marcin Golczak

Case Western Reserve University

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Dirk Meyer

University of Innsbruck

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