Daryl B. Wong
Stanford University
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Featured researches published by Daryl B. Wong.
Proceedings of the National Academy of Sciences of the United States of America | 2009
David E. Moilanen; Daryl B. Wong; Daniel E. Rosenfeld; Emily E. Fenn; M. D. Fayer
The exchange of water hydroxyl hydrogen bonds between anions and water oxygens is observed directly with ultrafast 2D IR vibrational echo chemical exchange spectroscopy (CES). The OD hydroxyl stretch of dilute HOD in H2O in concentrated (5.5 M) aqueous solutions of sodium tetrafluoroborate (NaBF4) displays a spectrum with a broad water-like band (hydroxyl bound to water oxygen) and a resolved, blue shifted band (hydroxyl bound to BF4−). At short time (200 fs), the 2D IR vibrational echo spectrum has 4 peaks, 2 on the diagonal and 2 off-diagonal. The 2 diagonal peaks are the 0–1 transitions of the water-like band and the hydroxyl-anion band. Vibrational echo emissions at the 1–2 transition frequencies give rise to 2 off-diagonal peaks. On a picosecond time scale, additional off-diagonal peaks grow in. These new peaks arise from chemical exchange between water hydroxyls bound to anions and hydroxyls bound to water oxygens. The growth of the chemical exchange peaks yields the time dependence of anion–water hydroxyl hydrogen bond switching under thermal equilibrium conditions as Taw = 7 ± 1 ps. Pump-probe measurements of the orientational relaxation rates and vibrational lifetimes are used in the CES data analysis. The pump-probe measurements are shown to have the correct functional form for a system undergoing exchange.
Journal of Chemical Physics | 2009
David E. Moilanen; Emily E. Fenn; Daryl B. Wong; M. D. Fayer
The dynamics of water in Aerosol-OT reverse micelles are investigated with ultrafast infrared spectroscopy of the hydroxyl stretch. In large reverse micelles, the dynamics of water are separable into two ensembles: slow interfacial water and bulklike core water. As the reverse micelle size decreases, the slowing effect of the interface and the collective nature of water reorientation begin to slow the dynamics of the core water molecules. In the smallest reverse micelles, these effects dominate and all water molecules have the same long time reorientational dynamics. To understand and characterize the transition in the water dynamics from two ensembles to collective reorientation, polarization and frequency selective infrared pump-probe experiments are conducted on the complete range of reverse micelle sizes from a diameter of 1.6-20 nm. The crossover between two ensemble and collective reorientation occurs near a reverse micelle diameter of 4 nm. Below this size, the small number of confined water molecules and structural changes in the reverse micelle interface leads to homogeneous long time reorientation.
Proceedings of the National Academy of Sciences of the United States of America | 2009
Emily E. Fenn; Daryl B. Wong; M. D. Fayer
The orientational dynamics of water at a neutral surfactant reverse micelle interface are measured with ultrafast infrared spectroscopy of the hydroxyl stretch, and the results are compared to orientational relaxation of water interacting with an ionic interface. The comparison provides insights into the influence of a neutral vs. ionic interface on hydrogen bond dynamics. Measurements are made and analyzed for large nonionic surfactant Igepal CO-520reverse micelles (water nanopool with a 9-nm diameter). The results are compared with those from a previous study of reverse micelles of the same size formed with the ionic surfactant Aerosol-OT (AOT). The results demonstrate that the orientational relaxation times for interfacial water molecules in the two types of reverse micelles are very similar (13 ps for Igepal and 18 ps for AOT) and are significantly slower than that of bulk water (2.6 ps). The comparison of water orientational relaxation at neutral and ionic interfaces shows that the presence of an interface plays the dominant role in determining the hydrogen bond dynamics, whereas the chemical nature of the interface plays a secondary role.
Journal of Physical Chemistry B | 2009
David E. Moilanen; Emily E. Fenn; Daryl B. Wong; M. D. Fayer
The orientational dynamics of water molecules at the interface in large Aerosol-OT (AOT) reverse micelles are investigated using ultrafast infrared spectroscopy of the OD stretch of dilute HOD in H(2)O. In large reverse micelles ( approximately 9 nm diameter or larger), a significant amount of the nanoscopic water is sufficiently distant from the interface that it displays bulk-like characteristics. However, some water molecules interact with the interface and have vibrational absorption spectra and dynamics distinct from bulk water. The different characteristics of these interfacial waters allow their contribution to the data to be separated from the bulk. The infrared absorption spectrum of the OD stretch is analyzed to show that the interfacial water molecules have a spectrum that peaks near 2565 cm(-1) in contrast to 2509 cm(-1) in bulk water. A two-component model is developed that simultaneously describes the population relaxation and orientational dynamics of the OD stretch in the spectral region of the interfacial water. The model provides a consistent description of both observables and demonstrates that water interacting with the interface has slower vibrational relaxation and orientational dynamics. The orientational relaxation of interfacial water molecules occurs in 18 +/- 3 ps, in contrast to the bulk water value of 2.6 ps.
Journal of Physical Chemistry B | 2012
Daryl B. Wong; Kathleen P. Sokolowsky; Musa I. El-Barghouthi; Emily E. Fenn; Chiara H. Giammanco; Adam L. Sturlaugson; M. D. Fayer
The dynamics of dimethyl sulfoxide (DMSO)/water solutions with a wide range of water concentrations are studied using polarization selective infrared pump-probe experiments, two-dimensional infrared (2D IR) vibrational echo spectroscopy, optical heterodyne detected optical Kerr effect (OHD-OKE) experiments, and IR absorption spectroscopy. Vibrational population relaxation of the OD stretch of dilute HOD in H(2)O displays two vibrational lifetimes even at very low water concentrations that are associated with water-water and water-DMSO hydrogen bonds. The IR absorption spectra also show characteristics of both water-DMSO and water-water hydrogen bonding. Although two populations are observed, water anisotropy decays (orientational relaxation) exhibit single ensemble behavior, indicative of concerted reorientation involving water and DMSO molecules. OHD-OKE experiments, which measure the orientational relaxation of DMSO, reveal that the DMSO orientational relaxation times are the same as orientational relaxation times found for water over a wide range of water concentrations within experimental error. The fact that the reorientation times of water and DMSO are basically the same shows that the reorientation of water is coupled to the reorientation of DMSO itself. These observations are discussed in terms of a jump reorientation model. Frequency-frequency correlation functions determined from the 2D IR experiments on the OD stretch show both fast and slow spectral diffusion. In analogy to bulk water, the fast component is assigned to very local hydrogen bond fluctuations. The slow component, which is similar to the slow water reorientation time at each water concentration, is associated with global hydrogen bond structural randomization.
Journal of the American Chemical Society | 2009
David E. Moilanen; Emily E. Fenn; Daryl B. Wong; M. D. Fayer
To determine the relative importance of the confining geometry and nanoscopic length scale versus water/interface interactions, the dynamic interactions between water and interfaces are studied with ultrafast infrared spectroscopy. Aerosol OT (AOT) is a surfactant that can form two-dimensional lamellar structures with known water layer thickness as well as well-defined monodispersed spherical reverse micelles of known water nanopool diameter. Lamellar structures and reverse micelles are compared based on two criteria: surface-to-surface dimensions to study the effect of confining length scales, and water-to-surfactant ratio to study water/interface interactions. We show that the water-to-surfactant ratio is the dominant factor governing the nature of water interacting with an interface, not the characteristic nanoscopic distance. The detailed structure of the interface and the specific interactions between water and the interface also play a critical role in the fraction of water molecules influenced by the surface. A two-component model in which water is separated into bulk-like water in the center of the lamellar structure or reverse micelle and interfacial water is used to quantitatively extract the interfacial dynamics. A greater number of perturbed water molecules are present in the lamellar structures as compared to the reverse micelles due to the larger surface area per AOT molecule and the greater penetration of water molecules past the sulfonate head groups in the lamellar structures.
Journal of Physical Chemistry B | 2011
Megan C. Thielges; Jun Y. Axup; Daryl B. Wong; Hyun Soo Lee; Jean K. Chung; Peter G. Schultz; M. D. Fayer
Protein dynamics and interactions in myoglobin (Mb) were characterized via two vibrational dynamics labels (VDLs): a genetically incorporated site-specific azide (Az) bearing unnatural amino acid (AzPhe43) and an active site CO ligand. The Az-labeled protein was studied using ultrafast two-dimensional infrared (2D IR) vibrational echo spectroscopy. CO bound at the active site of the heme serves as a second VDL located nearby. Therefore, it was possible to use Fourier transform infrared (FT-IR) and 2D IR spectroscopic experiments on the Az in unligated Mb and in Mb bound to CO (MbAzCO) and on the CO in MbCO and MbAzCO to investigate the environment and motions of different states of one protein from the perspective of two spectrally resolved VDLs. A very broad bandwidth 2D IR spectrum, encompassing both the Az and CO spectral regions, found no evidence of direct coupling between the two VDLs. In MbAzCO, both VDLs reported similar time scale motions: very fast homogeneous dynamics, fast, ∼1 ps dynamics, and dynamics on a much slower time scale. Therefore, each VDL reports independently on the protein dynamics and interactions, and the measured dynamics are reflective of the protein motions rather than intrinsic to the chemical nature of the VDL. The AzPhe VDL also permitted study of oxidized Mb dynamics, which could not be accessed previously with 2D IR spectroscopy. The experiments demonstrate that the combined application of 2D IR spectroscopy and site-specific incorporation of VDLs can provide information on dynamics, structure, and interactions at virtually any site throughout any protein.
Journal of Physical Chemistry B | 2011
Emily E. Fenn; Daryl B. Wong; Chiara H. Giammanco; M. D. Fayer
Water dynamics inside of reverse micelles made from the surfactant Aerosol-OT (AOT) were investigated by observing spectral diffusion, orientational relaxation, and population relaxation using two-dimensional infrared (2D IR) vibrational echo spectroscopy and pump-probe experiments. The water pool sizes of the reverse micelles studied ranged in size from 5.8 to 1.7 nm in diameter. It is found that spectral diffusion, characterized by the frequency-frequency correlation function (FFCF), significantly changes as the water pool size decreases. For the larger reverse micelles (diameter 4.6 nm and larger), the 2D IR signal is composed of two spectral components: a signal from bulk-like core water, and a signal from water at the headgroup interface. Each of these signals (core water and interfacial water) is associated with a distinct FFCF. The FFCF of the interfacial water layer can be obtained using a modified center line slope (CLS) method that has been recently developed. The interfacial FFCFs for large reverse micelles have a single exponential decay (∼1.6 ps) to an offset plus a fast homogeneous component and are nearly identical for all large sizes. The observed ∼1.6 ps interfacial decay component is approximately the same as that found for bulk water and may reflect hydrogen bond rearrangement of bulk-like water molecules hydrogen bonded to the interfacial water molecules. The long time offset arises from dynamics that are too slow to be measured on the accessible experimental time scale. The influence of the chemical nature of the interface on spectral diffusion was explored by comparing data for water inside reverse micelles (5.8 nm water pool diameter) made from the surfactants AOT and Igepal CO-520. AOT has charged, sulfonate head groups, while Igepal CO-520 has neutral, hydroxyl head groups. It is found that spectral diffusion on the observable time scales is not overly sensitive to the chemical makeup of the interface. An intermediate-sized AOT reverse micelle (water pool diameter of 3.3 nm) is analyzed as a large reverse micelle because it has distinct core and interface regions, but its core region is more constrained than bulk water. The interfacial FFCF for this intermediate-sized reverse micelle is somewhat slower than those found for the larger reverse micelles. The water nanopools in the smaller reverse micelles cannot be separated into core and interface regions. In the small reverse micelles, the FFCFs are biexponential decays to an offset plus a fast homogeneous component. Each small reverse micelle exhibits an ∼1 ps decay time, which may arise from local hydrogen bond fluctuations and a slower, ∼6-10 ps decay, which is possibly due to slow hydrogen bond rearrangement of noninterfacial water molecules or topography fluctuations at the interface.
Journal of Physical Chemistry B | 2013
Daryl B. Wong; Chiara H. Giammanco; Emily E. Fenn; M. D. Fayer
The vibrational dynamics of the antisymmetric and symmetric stretching modes of very low concentration spatially isolated D(2)O molecules in the room temperature ionic liquid (RTIL) 1-butyl-3-methylimidazolium hexafluorophosphate (BmImPF(6)) were examined using two-dimensional infrared (2D IR) vibrational echo spectroscopy and infrared pump-probe experiments. In BmImPF(6), D(2)Os antisymmetric and symmetric stretching modes are well resolved in the IR absorption spectrum in spite of the fact that the D(2)O is surrounded by a sea of ions, making it is possible to study inter- and intramolecular dynamics. Both population exchange between the modes and excited-state relaxation to the ground state contribute to the population dynamics. The kinetics for the incoherent population exchange (scattering) between the two modes was determined by the time dependence of the exchange peaks in the 2D IR spectrum. In addition, coherent quantum beats were observed at short time in both the amplitudes and 2D IR band shapes of the modes. The quantum beat decay is caused by dephasing due to both inhomogeneous and homogeneous broadening of the spectral lines. Analysis of the oscillations of the 2D line shapes demonstrates that there is some degree of anticorrelation in the inhomogeneous broadening of the two modes. It is proposed that a distribution in the coupling strength between the local modes that give rise to symmetric and antisymmetric eigenstates is responsible for the anticorrelation. Spectral diffusion, caused by structural evolution of the medium, occurs on multiple time scales and is identical for the two modes within experimental error. The spectral diffusion is fast compared to the time scale for complete orientational randomization of the RTIL. Spectral diffusion of the OD stretch of HOD in BmImPF(6) was also measured, and is essentially the same as that of the D(2)O modes. Orientational anisotropy measurements of HOD in BmImPF(6) determined the orientational relaxation dynamics of the isolated HOD molecules.
Journal of Chemical Physics | 2011
Emily E. Fenn; Daryl B. Wong; M. D. Fayer
Water dynamics as reflected by the spectral diffusion of the water hydroxyl stretch were measured in w(0) = 2 (1.7 nm diameter) Aerosol-OT (AOT)/water reverse micelles in carbon tetrachloride and in isooctane solvents using ultrafast 2D IR vibrational echo spectroscopy. Orientational relaxation and population relaxation are observed for w(0) = 2, 4, and 7.5 in both solvents using IR pump-probe measurements. It is found that the pump-probe observables are sensitive to w(0), but not to the solvent. However, initial analysis of the vibrational echo data from the water nanopool in the reverse micelles in the isooctane solvent seems to yield different dynamics than the CCl(4) system in spite of the fact that the spectra, vibrational lifetimes, and orientational relaxation are the same in the two systems. It is found that there are beat patterns in the interferograms with isooctane as the solvent. The beats are observed from a signal generated by the AOT/isooctane system even when there is no water in the system. A beat subtraction data processing procedure does a reasonable job of removing the distortions in the isooctane data, showing that the reverse micelle dynamics are the same within experimental error regardless of whether isooctane or carbon tetrachloride is used as the organic phase. Two time scales are observed in the vibrational echo data, ~1 and ~10 ps. The slower component contains a significant amount of the total inhomogeneous broadening. Physical arguments indicate that there is a much slower component of spectral diffusion that is too slow to observe within the experimental window, which is limited by the OD stretch vibrational lifetime.