David R. Smart

Nitrogen assimilation and growth of wheat under elevated carbon dioxide.

Simultaneous measurements of CO2 and O2 fluxes from wheat (Triticum aestivum) shoots indicated that short-term exposures to elevated CO2 concentrations diverted photosynthetic reductant from NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} or NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{2}^{-}}}\end{equation*}\end{document} reduction to CO2 fixation. With longer exposures to elevated CO2, wheat leaves showed a diminished capacity for NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} photoassimilation at any CO2 concentration. Moreover, high bicarbonate levels impeded NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{2}^{-}}}\end{equation*}\end{document} translocation into chloroplasts isolated from wheat or pea leaves. These results support the hypothesis that elevated CO2 inhibits NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} photoassimilation. Accordingly, when wheat plants received NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} rather than NH\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{4}^{+}}}\end{equation*}\end{document} as a nitrogen source, CO2 enhancement of shoot growth halved and CO2 inhibition of shoot protein doubled. This result will likely have major implications for the ability of wheat to use NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} as a nitrogen source under elevated CO2.

Wheat leaves emit nitrous oxide during nitrate assimilation

Nitrous oxide (N2O) is a key atmospheric greenhouse gas that contributes to global climatic change through radiative warming and depletion of stratospheric ozone. In this report, N2O flux was monitored simultaneously with photosynthetic CO2 and O2 exchanges from intact canopies of 12 wheat seedlings. The rates of N2O-N emitted ranged from <2 pmol⋅m−2⋅s−1 when NH\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{4}^{+}}}\end{equation*}\end{document} was the N source, to 25.6 ± 1.7 pmol⋅m−2⋅s−1 (mean ± SE, n = 13) when the N source was shifted to NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document}. Such fluxes are among the smallest reported for any trace gas emitted by a higher plant. Leaf N2O emissions were correlated with leaf nitrate assimilation activity, as measured by using the assimilation quotient, the ratio of CO2 assimilated to O2 evolved. 15N isotopic signatures on N2O emitted from leaves supported direct N2O production by plant NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} assimilation and not N2O produced by microorganisms on root surfaces and emitted in the transpiration stream. In vitro production of N2O by both intact chloroplasts and nitrite reductase, but not by nitrate reductase, indicated that N2O produced by leaves occurred during photoassimilation of NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{2}^{-}}}\end{equation*}\end{document} in the chloroplast. Given the large quantities of NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{3}^{-}}}\end{equation*}\end{document} assimilated by plants in the terrestrial biosphere, these observations suggest that formation of N2O during NO\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} \begin{equation*}{\mathrm{_{2}^{-}}}\end{equation*}\end{document} photoassimilation could be an important global biogenic N2O source.

Seasonal changes of whole root system conductance by a drought-tolerant grape root system

The role of root systems in drought tolerance is a subject of very limited information compared with above-ground responses. Adjustments to the ability of roots to supply water relative to shoot transpiration demand is proposed as a major means for woody perennial plants to tolerate drought, and is often expressed as changes in the ratios of leaf to root area (AL:AR). Seasonal root proliferation in a directed manner could increase the water supply function of roots independent of total root area (AR) and represents a mechanism whereby water supply to demand could be increased. To address this issue, seasonal root proliferation, stomatal conductance (gs) and whole root system hydraulic conductance (kr) were investigated for a drought-tolerant grape root system (Vitis berlandieri×V. rupestris cv. 1103P) and a non-drought-tolerant root system (Vitis riparia×V. rupestris cv. 101-14Mgt), upon which had been grafted the same drought-sensitive clone of Vitis vinifera cv. Merlot. Leaf water potentials (ψL) for Merlot grafted onto the 1103P root system (–0.91±0.02 MPa) were +0.15 MPa higher than Merlot on 101-14Mgt (–1.06±0.03 MPa) during spring, but dropped by approximately –0.4 MPa from spring to autumn, and were significantly lower by –0.15 MPa (–1.43±0.02 MPa) than for Merlot on 101-14Mgt (at –1.28±0.02 MPa). Surprisingly, gs of Merlot on the drought-tolerant root system (1103P) was less down-regulated and canopies maintained evaporative fluxes ranging from 35–20 mmol vine−1 s−1 during the diurnal peak from spring to autumn, respectively, three times greater than those measured for Merlot on the drought-sensitive rootstock 101-14Mgt. The drought-tolerant root system grew more roots at depth during the warm summer dry period, and the whole root system conductance (kr) increased from 0.004 to 0.009 kg MPa−1 s−1 during that same time period. The changes in kr could not be explained by xylem anatomy or conductivity changes of individual root segments. Thus, the manner in which drought tolerance was conveyed to the drought-sensitive clone appeared to arise from deep root proliferation during the hottest and driest part of the season, rather than through changes in xylem structure, xylem density or stomatal regulation. This information can be useful to growers on a site-specific basis in selecting rootstocks for grape clonal material (scions) grafted to them.

Resource limitations to nitric oxide emissions from a sagebrush-steppe ecosystem

We monitored soil emissions of NO, NO2, N2O, and CO2 throughout the summer dry season at a remote North American sagebrush-steppe ecosystem following application of several resources, including water, NH4+, NO3− and sucrose. Despite low levels of soil NH4+ (5.60±0.95 mg NH4+-N per kg soil, mean±S.E.), and NO3−-N (1.34±0.20 mg NO3−-N per kg soil), NO emissions ranged from about 0.2 to 2.8 ng NO-N m−2 s−1, comparable to rates measured from many agricultural, tropical, and other undisturbed ecosystems. Soil wetting increased NO emissions as much as 400-fold when initial gravimetric soil moisture contents were less than about 50 mg kgsoil−1, and soil temperature was greater than or equal to 20 °C. Wetting treatments with 20 mg NH4+-N kgsoil−1 raised NO emission rates to a level that was nearly an order of magnitude higher than that observed after water addition alone. Wetting treatments with 20 mg NO3−-N kgsoil−1, 240 mg sucrose-C kgsoil−1, or NO3−plus sucrose had no statistically significant effect upon NO emissions. Soil denitrifying enzyme activity was low at this site, and N2O emissions in the field were below detection limits. Soil nitrifying enzyme activity was extremely high at this site, indicating that the NH4+ released by ammonification would be consumed at least once every 1.7 days. These observations indicate that NO emissions from this undisturbed ecosystem were likely a consequence of high nitrification activity, and that sagebrush-steppe ecosystems may be a more important NO source than has been previously assumed.

Root foraging in response to heterogeneous soil moisture in two grapevines that differ in potential growth rate.

* Linkages between plant growth rate and root responses to soil moisture heterogeneity were investigated. * Root dynamics were studied using genetically identical shoots (Vitis vinifera cv. Merlot) with genetically distinct root systems that promote higher (HSV) and lower (LSV) shoot growth rates (1103P and 101-14 Mgt, respectively). Three quantities of irrigation replenished different amounts of evapotranspiration (0, 40 and 100%ET(c)) in a California vineyard. * Roots of HSV vines exhibited more plasticity, as indicated by greater preferential growth in irrigated soil during the summer, and a larger shift in root diameter with a change in soil moisture than LSV vines. Higher tolerance of low soil moisture was not observed in LSV roots--root survivorship was similar for the two rootstocks. LSV vines produced a large fraction of its roots during the winter months and increased root density over the study, while HSV vines produced roots mainly in summer and only exhibited a high initial peak in root biomass in the first year. * These results demonstrated that a plant of higher vigor has greater morphological plasticity in response to lateral heterogeneity in soil moisture but similar tolerance to moisture stress as indicated by root survivorship in dry soil.

Kinetics of ammonium and nitrate uptake among wild and cultivated tomatoes

SummaryConcentration dependence of net ammonium and nitrate uptake was monitored for a cultivar of tomato, Lycopersicon esculentum, and two accessions of a neotropical wild relative, L. hirsutum. The kinetics of net NH4+uptake differed among these taxa and were not dependent on the ionic composition of the nutrient solution. The kinetics of net NO3-uptake were dependent on the composition of the nutrient solution; the presence of NH4+or Cl- enhanced net NO3-uptake for the cultivated species and for a highland accession of the wild species. The capacity for net NO3-uptake was greater than the capacity for net NH4+uptake in all three taxa; the proportion of NO3-to NH4+absorbed was much greater for the wild taxa. Our data suggest that NO3-may be a more important source of mineral nitrogen than NH4+for these tropical taxa.

REGULATION OF NITRIC OXIDE EMISSIONS FROM FOREST AND RANGELAND SOILS OF WESTERN NORTH AMERICA

Nitric oxide (NO) is a relatively short-lived trace gas that reacts with oxygen in the troposphere to produce the air pollutant ozone. It also reacts with water vapor to form nitric and nitrous acids, which acidify precipitation and increase N deposition. Models currently used to predict soil NO fluxes are based on the assumption that NO flux is proportional to the gross rate of nitrification or N mineralization; however, this assumption has not been tested because of the difficulty in measuring gross N-cycling rates in situ. We measured soil NO fluxes, gross and net N-cycling rates, and a variety of other soil char- acteristics in the forest floor and intact soil cores at nine undisturbed forest and rangeland ecosystems of New Mexico, Utah, and Oregon, USA, to determine which soil variables were most closely related to soil NO flux. Soil NO fluxes ranged from a low of 0.02 ng N·m 22 ·s 21 , prior to wetting in a western hemlock-sitka spruce forest on the Oregon coast, to a high of 6.74 ng N·m 22 ·s 21 , one hour after soil wetting in a juniper woodland of central Oregon. In contrast to our expectations, neither gross nitrification nor gross mineralization was correlated with soil NO flux. Fluxes were positively correlated with net rates of min- eralization and nitrification, soil NO3 2 concentrations, bulk density, and pH, and negatively correlated with gross rates of NO3 2 consumption in the forest floor, soil organic carbon (SOC), soil C:N, and soil water content. Principal-component analysis showed that NO flux after water addition (2 cm of water) had a strong negative correlation with microbial demand for N (as indicated by net mineralization, net nitrification, SOC, and C:N). Our results suggest that, even in well-drained soils, NO efflux is limited more by NO con- sumption than by NO production. As a result, models utilizing the more easily measured net rates, rather than gross rates, may be better predictors of soil NO fluxes across a range of ecosystems.

Dormant Buds and Adventitious Root Formation by Vitis and Other Woody Plants

Viticulture has historically depended upon clonal propagation of winegrape, tablegrape, and rootstock cultivars. Dependence on clonal propagation is perpetuated by consumer preference, legal regulations, a reproductive biology that is incompatible with sustaining genetic lines, and the fact that grapevine breeding is a slow process. Adventitious root formation is a key component to successful clonal propagation. In spite of this fact, grapevine has not been a centerpiece for adventitious root research. Dormant woody canes represent complex assemblages of tissues and organs. Factors that further contribute to such complexity include levels of endogenous plant growth regulators, the extent and duration of dormancy, carbohydrate storage, transport, the presence or absence of dormant buds or emergent shoots, and preconditioning treatments. For the above reasons, the mechanisms driving adventitious root formation by grapevine and other woody cuttings are poorly understood. We present results indicating that the dormant bud on cane cuttings from a non-recalcitrant to root Vitis vinifera cultivar, cv. Cabernet Sauvignon, slows or inhibits adventitious root emergence. In contrast to Cabernet Sauvignon, removal of the dormant bud from cane cuttings of a recalcitrant to root hybrid rootstock (V. berlandieri × V. riparia cv. 420A) and an intermediate to root hybrid rootstock (V. riparia × V. rupestris cv. 101-14) had no influence on adventitious root emergence. Reciprocal transplanting of nodes containing dormant buds among all three cultivars did not affect rooting behavior. Our results indicate that the commonly held belief that bud removal diminishes adventitious root emergence is not true.

The Potential for California Agricultural Crop Soils to Reduce Greenhouse Gas Emissions: A Holistic Evaluation

Abstract Climate change predictions for California indicate that agriculture will need to substantially adapt to reduced water availability, changing crops, and changes in temperatures, in order to sustain the level and diversity of crop production in California. California legislators recently passed the California Global Warming Solutions Act of 2006 (AB 32) that requires all industries to reduce the three major greenhouse gases (GHGs) (CO2, N2O, and CH4) to 1990 levels by 2020. The great diversity of cropping systems and management practices in California agriculture leads, however, to greater uncertainties in estimates of GHG budgets compared to Midwest agriculture. In light of AB 32, we, here, synthesize all the available information on the potentials for California agriculture to sequester C and reduce GHG emissions through various alternative management practices: minimum or no tillage, organic, cover cropping, manuring, and reduced chemical fertilizer management. Our review indicates that C sequestration and GHG emission reductions are possible, but there is no single land management practice or change in inputs that could mitigate the C released from agricultural practices (e.g., fossil fuel usage, land-use changes, soil erosion, biomass burning, and N fertilizer associated emissions) and meet climate change commitments set out in AB 32. Therefore, it is only the integration of different management strategies that shows considerable potential for C mitigation as well as provides important cobenefits to ensure the future sustainability of California agriculture.

Spatiotemporal variation of event related N2O and CH4 emissions during fertigation in a California almond orchard

Nitrogen fertilizer applied to soil is the primary source of the greenhouse gas (GHG) nitrous oxide (N2O). The assessment of N2O emissions, or net fluxes of the GHG methane (CH4), are lacking for upland, arid agricultural ecosystems worldwide. In California, where rates of application for nitrogen (N) can exceed 300 kg per hectare for N-intensive fruit and nut crops (>2 million acres), liquid N fertilizers applied through microirrigation systems (fertigation) represent the predominant method of N fertilization. Little information is available for how these concentrated and spatially discrete N solution applications influence N2O emissions and net CH4 fluxes (the sum of methanogenic and methanotrophic activity). In this study we examined soil N2O-N emissions and net CH4 fluxes for drip and stationary microsprinklers, two of the most widely used fertigation emitters, in an almond orchard where 235.5 kg N/ha were applied during the season of measurement (2009–2010). We accomplished this by modeling the spatial patterns of N2O and CH4 at the scale of meters and centimeters using simple mathematical approaches. For two applications of 33.6 kg/ha and three applications of 56.1 kg/ha targeted to the phenologic stages with highest tree N demand, the spatial patterns of N2O fluxes were similar to the emitter water distribution pattern and independent of temperature and fertilizer N form applied. Net CH4 fluxes were extremely low and there was no discernible spatial pattern, but areas kept dry (driveways between tree rows) generally consumed CH4 while it was produced in the microirrigation wet-up area. The N2O-N emissions for fertigation events at the scale of days, and over a season, were significantly higher from the drip irrigated orchard (1.6 ± 0.7 kg N2O-N ha−1yr−1) than a microsprinkler irrigated orchard (0.6 ± 0.3 kg N2O-N ha−1 yr−1). N2O emissions and net CH4 fluxes were only significantly correlated with soil water filled pore space and not with mineral-N. The correlation was much better for N2O emissions. Our results greatly improve our ability to scale N2O production to the orchard level, and provide growers with a tool for lowering almond orchard carbon and nitrogen footprints.