Denis Picot

A typical browser, the roe deer, may consume substantial quantities of grasses in open landscapes

In open landscapes, grass leaves provide an abundant resource for ruminants, with potentially high nutritional value. However, their extensive digestion requires a long fermentation time, achieved through large rumen and the stratification of the rumen content. Due to anatomical and physiological differences, ruminants differ in their ability to process grass leaves. Particularly, the small roe deer, with its viscous saliva and unstratified rumen content, is generally classified as a strict browser. We hypothesised that roe deer may be able to use grass leaves in some circumstances, notably when the availability of other resources declines and when the quality of grass leaves is high. We expected that (1) grass leave consumption should be higher in open landscapes than in forest habitat because grasses are more widely available and more nutritious in open landscapes and (2) grass leave consumption should increase in winter when the availability of other resources declines. We assessed grass consumption by microscopic analysis of roe deer faecal pellets collected monthly both in forest habitat and in the surrounding open landscape. We found that both the occurrence and the proportion of grass leaves in the faeces were higher in the open landscape (predicted mean proportion 0.31) than in the forest (predicted mean proportion 0.05). In addition, the proportion of grass leaves in the faeces was higher in winter and lower in spring in both forest and open landscape. We suggest that roe deer are able to use grass leaves with unusually high nutritional quality in winter in this mild climate area. This involves a certain level of digestive plasticity to efficiently digest high quality grasses and may confer nutritional benefit to individuals feeding in an open landscape.

Understanding the paradox of deer persisting at high abundance in heavily browsed habitats

In the context of remarkable increases in many deer populations observed in temperate forests, it is critical to better understand the processes sustaining abundant populations despite dramatic declines in the vegetation they feed on. When natural predation and hunting levels are too low to control deer populations, a resource-driven negative feedback is expected. Such a feedback assumes that the remaining resources do not match the energy requirements of a current herbivore population, thereby limiting herbivore abundance. Here we take advantage of a well-documented, long-term study of abundant predator-free populations of black-tailed deer Odocoileus hemionus sitkensis on the Haida Gwaii archipelago (Canada) to assess the ability of a heavily browsed forest habitat to sustain abundant deer populations. For two deer populations, we: 1) compared the energy provided by various resource pools to the energy required by deer; and 2) identified what components of the environment contributed most to support them. Qualitatively, our results are robust to the many assumptions and uncertainties and identify the resources currently available that allow these abundant deer populations to meet their energy needs despite the apparent paucity in resources. Resources are provided by a flux of hardly visible plant tissue produced by perennial species highly tolerant of herbivory and able to survive via underground structures (e.g. rhizomes), and by subsidies provided by canopy trees or by plants in refuges (i.e. litterfall and seed bank). We discuss the possibility of a resource-driven feedback that may ultimately occur in the long term as a result of changes in recruitment, productivity and fertility of plants. The possible lack of resource-driven feedback in the short or medium term should be considered by managers when assessing the need for active deer population control in situations without carnivores or hunting.

Detection of atypical Chlamydiaceae in roe deer (Capreolus capreolus).

Investigations on fecal samples, vaginal swabs and sera from roe deer (Capreolus capreolus) in south-western France led to the detection of a non-classified Chlamydiaceae strain. A total of 85 vaginal swabs were sampled from roe deer that had been captured in 2012 (n=42) and 2013 (n=43). Using a Chlamydiaceae family-specific real-time PCR, only one vaginal swab out of the 42 samples done in 2012 tested positive and was subsequently identified as Chlamydia (C.) psittaci. In contrast, 6/43 vaginal swab samples were positive in 2013. Four of these positive samples came from a single group of roe deer, captured in the Fabas plain. Fecal samples from this group of 9 females were subsequently analyzed, with 6 of them testing positive with the Chlamydiaceae-specific PCR. All positive samples collected in 2013 were negative when re-tested with C. abortus-, C. pecorum- and C. suis-specific real-time PCR assays. Sera from this group of 9 females were analyzed with two immunoassays (recomLine and ELISA). Whereas intense positive reactions with C. pneumoniae antigens were observed for all sera when tested with the recomLine test, none was positive with the C. abortus specific ELISA test. Comparative sequence analysis of the 16S, 23S rRNA and ompA gene sequences from 3 animals, as well as the MLST analysis from 2 animals, showed that this roe deer group likely harbored the same bacterium related to members of the family Chlamydiaceae. Notably, the roe deer strain formed a separate entity different from the currently recognized chlamydial species, with C. trachomatis, C. suis and C. muridarum appearing as its closest relatives.

Temporal dynamics of seed excretion by wild ungulates: implications for plant dispersal.

Dispersal is a key process in metapopulation dynamics as it conditions species’ spatial responses to gradients of abiotic and biotic conditions and triggers individual and gene flows. In the numerous plants that are dispersed through seed consumption by herbivores (endozoochory), the distance and effectiveness of dispersal is determined by the combined effects of seed retention time in the vector’s digestive system, the spatial extent of its movements, and the ability of the seeds to germinate once released. Estimating these three parameters from experimental data is therefore crucial to calibrate mechanistic metacommunity models of plant–herbivore interactions. In this study, we jointly estimated the retention time and germination probability of six herbaceous plants transported by roe deer (Capreolus capreolus), red deer (Cervus elaphus), and wild boar (Sus scrofa) through feeding experiments and a Bayesian dynamic model. Retention time was longer in the nonruminant wild boar (>36 h) than in the two ruminant species (roe deer: 18–36 h, red deer: 3–36 h). In the two ruminants, but not in wild boar, small and round seeds were excreted faster than large ones. Low germination probabilities of the excreted seeds reflected the high cost imposed by endozoochory on plant survival. Trait-mediated variations in retention time and germination probability among animal and plant species may impact plant dispersal distances and interact with biotic and abiotic conditions at the release site to shape the spatial patterns of dispersed plant species.

Host specificity, pathogen exposure, and superinfections impact the distribution of Anaplasma phagocytophilum genotypes in ticks, roe deer, and livestock in a fragmented agricultural landscape

Anaplasma phagocytophilum is a bacterial pathogen mainly transmitted by Ixodes ricinus ticks in Europe. It infects wild mammals, livestock, and, occasionally, humans. Roe deer are considered to be the major reservoir, but the genotypes they carry differ from those that are found in livestock and humans. Here, we investigated whether roe deer were the main source of the A. phagocytophilum genotypes circulating in questing I. ricinus nymphs in a fragmented agricultural landscape in France. First, we assessed pathogen prevalence in 1837 I. ricinus nymphs (sampled along georeferenced transects) and 79 roe deer. Prevalence was dramatically different between ticks and roe deer: 1.9% versus 76%, respectively. Second, using high-throughput amplicon sequencing, we characterized the diversity of the A. phagocytophilum genotypes found in 22 infected ticks and 60 infected roe deer; the aim was to determine the frequency of co-infections. Only 22.7% of infected ticks carried genotypes associated with roe deer. This finding fits with others suggesting that cattle density is the major factor explaining infected tick density. To explore epidemiological scenarios capable of explaining these patterns, we constructed compartmental models that focused on how A. phagocytophilum exposure and infection dynamics affected pathogen prevalence in roe deer. At the exposure levels predicted by the results of this study and the literature, the high prevalence in roe deer was only seen in the model in which superinfections could occur during all infection phases and when the probability of infection post exposure was above 0.43. We then interpreted these results from the perspective of livestock and human health.

Short-term browsing by roe deer has little effect on survival and growth of sessile oak seedlings

We studied the effect of roe deer (Capreolus capreolus) browsing on the growth and mortality of sessile oak (Quercus petraea) seedlings. First, we measured the height and basal diameter, and counted the number of shoots of the 849 seedlings of an experimental plantation, 60 of which were individually protected by fencing. We then introduced two tame roe deer females every day for three weeks from late May to mid-June. Measurements and counts were repeated after roe deer removal, then once again the following winter. We found no significant effect of browsing on mortality, total height, or basal diameter of the seedlings. However, the browsed seedlings exhibited a lower number of shoots despite regrowth observed after roe deer removal. We propose to use the tolerance of oak to deer browsing to promote natural and inexpensive methods, to protect oak during regeneration, such as the spatial arrangement of plants or the use of slash or surrounding vegetation in favourable environments.

Levels of fecal glucocorticoid metabolites do not reflect environmental contrasts across islands in black-tailed deer (Odocoileus hemionus sitkensis) populations

Animals face stressful situations to which they can respond by mounting a physiological response. Few studies have compared the relative effects of two or more stressors on this response. We compared how low food abundance and hunting affected levels of fecal glucocorticoid metabolites (FGM), an indicator of stress, in Sitka black-tailed deer (Odocoileus hemionus sitkensis) on the Haida Gwaii archipelago (Canada). We monitored monthly FGM levels over a year on three islands: on two, there was no hunting but deer were exposed to increased risk of severe food depletion; and on one, deer had access to abundant food but were exposed to a few days of hunting each year. Based on the context of the study, we tentatively predicted that FGM levels would be higher in low food abundance/safe islands. We also predicted that FGM levels would be higher in winter when food is rarer, particularly in low food abundance/safe islands. The three deer populations presented similar average FGM levels and seasonal variations. Our predictions were therefore not supported. Our results rather suggested that environmental contrasts, perceived by us as large (increased risk of starvation on ELI and Kunga islands) or associated with differences in animal behavior (human avoidance on Reef island), did not lead to increased stress responses. We discuss plausible explanations, including the down-regulation of the stress response in depleted environments and the lack of stress response to low hunting pressure when behavioral responses to risk are unlikely to be costly.

Neophobia is linked to behavioural and haematological indicators of stress in captive roe deer

Neophobia is an important personality trait that allows animals to minimize exposure to threat. We investigated the existence of consistent individual differences in the level of neophobia in captive roe deer, Capreolus capreolus, using an experimental set-up. Our main objective was to explore the link between an individuals level of neophobia with behavioural and physiological responses measured during a stressful situation, i.e. capture and restraint, to facilitate characterization of neophobia in the wild. We found that the probability of initiating a feeding bout and the feeding efficiency over bouts both decreased in the presence of a novel object. However, there was pronounced variation in the degree to which individuals were affected by the experimental treatment. First, feeding efficiency decreased the most among individuals that reacted less markedly to an acutely stressful situation (capture). Second, latency between the first visit and the first feeding bout increased the most among individuals that had a higher concentration of fructosamine in their blood, an indicator of chronic stress. Our results indicate that individuals that are more neophobic (high latency to first feeding bout and low feeding efficiency in the presence of a novel object) are also less proactive (low behavioural response to capture, high levels of fructosamine), suggesting the existence of a behavioural syndrome. We conclude that behavioural and physiological parameters measured during capture provide reliable indicators of neophobia for roe deer, providing an exciting new avenue for the study of animal personality in the wild.