Dian Fiantis

Macroecology of methane-oxidizing bacteria: the β-diversity of pmoA genotypes in tropical and subtropical rice paddies

Studies addressing microbial biogeography haveincreased during the past decade, but research onmicrobial distribution patterns is still in its infancies,and many aspects are only poorly understood. Here,we compared the methanotroph community in paddysoils sampled in Indonesia, Vietnam, China and Italy,focusing on the distance–decay relationship.We usedthe pmoA gene as marker for methanotroph diversityin terminal restriction fragment length polymorphism,microarray and pyrosequencing approaches. Wecould observe a significant increase of β-diversity with geographical distance across continents (12 000 km).Measured environmental parameters explained only asmall amount of data variation, and we found no evidencefor dispersal limitation. Thus, we propose historicalcontingencies being responsible for theobserved patterns. Furthermore, we performed anin-depth analysis of type II methanotroph pmoA distributionat the sequence level. We used ordinationanalysis to project sequence dissimilarities into athree-dimensional space (multidimensional scaling).The ordination suggests that type II methanotrophs inpaddy fields can be divided into five major groups.However, these groups were found to be distributed inall soils independent of the geographic origin. Byincluding tropical field sites (Indonesia and Vietnam)into the analysis, we further observed the firstpaddy fields harbouring a methanotroph communitydepleted in type II methanotrophs.

Determination of the Geochemical Weathering Indices and Trace Elements Content of New Volcanic Ash Deposits from Mt. Talang (West Sumatra) Indonesia

Since the Indonesian archipelago is part of the very active and dynamic Pacific Ring of Fires, the volcanic eruptions occur from time to time. Immediately after the eruption of Mount Talang in West Sumatra (April 12, 2005), volcanic ashes, both unleached and leached were collected. The deposits from Mt. Talang were andesitic to basaltic in composition. The volcanic ash consisted of volcanic glass, plagioclase feldspar in various proportions, orthopyroxene, clinopyroxene, olivine, amphibole, titanomagnetite. We conducted the total elemental analysis of the bulk samples of the volcanic ash. The contents of major, trace and rare elements as well as heavy metals were determined by wet chemical methods and x-ray fluorescence (XRF) analyses. Although the volcanic ash of Mt. Talang are still very new, an evaluation of the geochemical weathering indices was performed with the objective of showing the volcanic ash condition at the early stage of weathering. Eight weathering indices were evaluated. The results showed that the unleached volcanic ash has higher Ruxton Ratio (R), Weathering Index of Parker (WIP), Product of Weathering Index (PWI) and Silica Titanium Index (STI) values compared to the leached ash, while the leached ash exhibited higher Chemical Index of Alteration (CIA), Chemical Index of Weathering (CIW), Vogt’s Residual Index (VO), and Plagioclase Index of Alteration (PIA). These weathering indices can be used to quantify the condition of the volcanic ashes at the initial stage of weathering, to evaluate their fertility, to provide a better understanding of element mobility during weathering, and predict the source of soil nutrients as well as determine the products of primary minerals alteration.

Changes in the Chemical and Mineralogical Properties of Mt. Talang Volcanic Ash in West Sumatra during the Initial Weathering Phase

Eruptions from Talang volcano on 12 April 2005 distributed volcanic ash over portions of the Solok District of West Sumatra, Indonesia. Unleached and leached pristine volcanic ash were collected immediately after the eruption, and the third sample was collected after 2 years. The mineralogy and chemical properties of pristine volcanic ash and volcanic ash deposits that were weathered for 2 years from the 2005 eruption of Mt. Talang, Sumatra, were studied to characterize the volcanic ash, identify the primary minerals present, and determine its chemical properties. Results showed that the volcanic ash contained 30% noncrystalline minerals (or volcanic glass); the remaining ash is composed of crystalline minerals such as labradorite, hypersthene, augite, hornblende, olivine, opaque ferromagnetic minerals, and rock fragments. Notable differences in pH values were observed as the pH tended to become more acidic from the unleached, leached, and weathered volcanic ash, but the ash did not give much response to the sodium fluoride (NaF) test. Total sulfur gradually decreased from 3.28% in unleached ash to 1.93% after 2 years. Available phosphorus (P) in the unleached volcanic ash was 68 mg kg−1, and this value was decreased by 15 % after 2 years of being exposed to the atmosphere, while phosphate retention ranged between 52.8% and 66.8%. Cation exchange capacity (CEC) was low with the value of 10 cmolc kg−1 although base saturation was high, exceeding 75%. The low acid oxalate–extractable silicon (Si), aluminum (Al), and iron (Fe) values of 0.07%, 0.25% and 1.17%, respectively, show the scarcity of secondary amorphous compounds in the ash. Total elemental analysis indicated that no differences were found in total silica oxide (SiO2) content of all samples, with a value about 56%, and this volcanic ash can be classified as basaltic andesite. We observed that removal of chemical elements by leaching was large for calcium oxide (CaO), magnesium oxide (MgO), and sodium oxide (Na2O) as the values decreased in time. Solid-state 29Si and 27Al magic angle spinning (MAS) nuclear magnetic resonance (NMR) studies indicated that Al occurred in both tetrahedral and octahedral forms. Silicon was not present in the tetrahedral layer. An intense peak at −92 ppm was indicative of the presence of aluminosilicates.

Initial Carbon Storage in New Tephra Layers of Mt. Talang in Sumatra as Affected by Pioneer Plants

ABSTRACT To date, no global data on carbon sequestration at the initial weathering phase of tephra deposits are available. To study carbon storage in the new volcanic deposit, tephra layers were reconstructed for a period of 46 months. The tephra samples were collected immediately after eruption of Mount (Mt.) Talang on 12 April 2005, over portions of the Solok District in West Sumatra, Indonesia. Pot experiments were filled with and without soil materials and covered with the collected tephra. The pot experiments were conducted in a wired house. The tephra was applied in 0, 2.5 and 5 cm depths to simulate natural tephra deposition. Every day 250 ml of filtered water was added and allowed to percolate. Solid fraction from the tephra layer was collected and analyzed at regular intervals and primary plant succession was observed over a period of 4 years. After 2 months, blue-green algae (cyanobacteria) started to colonize the bare surface tephra layer to form an algae mat. After 16 months, the surface was transformed into a green biofilm of lichen. Vascular plants (grasses and shrubs) started to be established after 2 years. Total carbon (TC) content of the tephra layer was increased significantly from 0.19 to 1.75% or eight times higher after 46 months of incubation. Higher TC storage was found in the 2.5 cm compared to that of the 5.0 cm tephra layer, which was reconstructed above the soil, with values of 1.75 and 0.89%, respectively. On the contrary, lesser amount of TC was accumulated in the single tephra layer (without soil underneath). Between 71 and 90% of TC was considered as total organic carbon (TOC). The labile organic carbon (LOC) content in the 2.5 cm and 5.0 cm of tephra layer was found to be 0.22 and 0.77%, respectively, at the end of incubation. This experiment confirmed the potential of tephra to capture carbon from the atmosphere with the help of nonvascular plants and then by vascular plants and finally sink them in the tephra layer.

Carbon pools in new tephra layers of Mt. Talang (Indonesia) during its initial weathering phase

felixhayford@yahoo.com Background: Sea-level rise and groundwater linkages affect drinking groundwater and livelihood in general. What problems does it pose to coastal Ghana and what interventions can empower coastal people to adapt fully to groundwater quality problem. Communities close to the coastline likely to have their water compromised and their livelihood more affected than those far from the coastline.