Dimitri Pappas

Raman spectroscopy in bioanalysis.

Recent advances in instrument design have allowed researchers to use smaller, more efficient components in designing Raman spectrometers. Advances in instrumentation have increased the performance of Raman instruments and increased their usage in bioanalysis. This paper reviews recent improvements in instrument design and discusses several applications of Raman spectroscopy to diagnosis in biology, chemistry and medicine.

Detection of apoptosis: A review of conventional and novel techniques

Apoptosis, or programmed cell death, has been shown to play a role in a number of diseases, including heart disease and cancer. Apoptosis is also a vital cellular process that helps to regulate tissue growth, fetal development, immune response, and a host of other biological processes. Deviation from the careful regulation of apoptosis is responsible for a host of diseases and health concerns. As such, understanding the process of apoptosis is vital for therapy development. Over the years, a number of methods have been discovered and developed to detect apoptosis. There are several standard techniques such as electron microscopy, the TUNEL assay, and flow cytometry. In addition, new techniques are quickly emerging, such as microfluidic devices, single molecule spectroscopy, and electrochemical methods. This review will cover some examples of the most common techniques as well as some new techniques in order to show the broad spectrum of methods available to detect apoptosis in cells.

Novel uses of lasers in atomic spectroscopy. Plenary Lecture

This paper reviews several novel uses of lasers in atomic spectroscopy. A tutorial discussion is given of the basic processes involving the interaction of laser radiation with atoms and the measurement approaches. Laser microprobes, especially laser induced breakdown spectroscopy and laser ablation-inductively coupled plasma-optical emission or mass spectrometry are reviewed thoroughly with respect to principles, instrumentation and applications. Laser excited atomic fluorescence and atomic absorption spectrometry with diode lasers are considered primarily with respect to recent publications. Laser-enhanced ionization, resonance ionization and resonance ionization imaging are also thoroughly reviewed with respect to recent publications. Diagnostical measurements of plasmas and atom reservoirs are discussed. The principles of six laser based atomic absorption methods are given and the methods are compared with respect to detection limits. Finally, future uses of lasers in atomic spectroscopy and a comparison of the characteristics of various atomic methods for trace elements are given.

Cell culture chip using low-shear mass transport.

We have developed a flow cell that allows culturing adherent cells as well as suspended cells in a stable, homogeneous, and low-shear force environment. The device features continuous medium supply and waste exchange. In this paper, a simple and fast protocol for device design, fabrication, and assembly (sealing) based on a poly(dimethylsiloxane) (PMDS)/glass slide hybrid structure is described. The cell culture system performance was monitored, and the effective shear force inside the culture well was also determined. By manipulating the device dimensions and volumetric flow rate, shear stress was controlled during experiments. Cell adhesion, growth, proliferation, and death over long-term culture periods were observed by microscopy. The growth of both endothelial and suspension cells in this device exhibited comparable characteristics to those of traditional approaches. The low-shear culture device significantly reduced shear stress encountered in microfluidic systems, allowing both adherent and suspended cells to be grown in a simple device.

Recent advances in microfluidic cell separations

The isolation and sorting of cells has become an increasingly important step in chemical and biological analyses. As a unit operation in more complex analyses, isolating a phenotypically pure cell population from a heterogeneous sample presents unique challenges. Microfluidic systems are ideal platforms for performing cell separations, enabling integration with other techniques and enhancing traditional separation modalities. In recent years there have been several techniques that use surface antigen affinity, physical interactions, or a combination of the two to achieve high separation purity and efficiency. This review discusses methods including magnetophoretic, acoustophoretic, sedimentation, electric, and hydrodynamic methods for physical separations. We also discuss affinity methods, including magnetic sorting, flow sorting, and affinity capture.

Ischemia/reperfusion injury of primary porcine cardiomyocytes in a low-shear microfluidic culture and analysis device.

Ischemia/reperfusion (I/R) injury was induced in primary porcine cardiomyocytes in a low-shear microfluidic culture chip. The chip was capable of sustaining the cardiomyocyte culture and inducing I/R injury by subjecting the cells to periods of hypoxia lasting 3-4 hours followed by normoxia. Mitochondrial membrane potential was assayed using MitoTracker Red to follow mitochondrial depolarization, the earliest stage of apoptosis. Cell adhesion and morphology were also determined simultaneously with fluorescence measurements. Changes in membrane potential were observed earlier than previously reported, with mitochondria becoming depolarized as early as 2 hours into the ischemia period. The cells with depolarized mitochondria were deemed apoptotic. Out of 38-61 cells per time frame, the fraction of apoptotic cells was found to be similar to control samples (3%) at two hours of ischemia, which increased up to 22% at the end of the ischemia period as compared to 0% in the control samples. Morphological analysis of cells showed that 4 hours of ischemia followed by reperfusion produced blebbing cells within 2 hours of restoring oxygen to the chip. This approach is a versatile method for cardiomyocyte stress, and in future work additional analytical probes can be incorporated for a multi-analyte assay of cardiomyocyte apoptosis.

Open-Tubular Capillary Cell Affinity Chromatography: Single and Tandem Blood Cell Separation

In this paper, an open-tubular capillary cell affinity chromatography (OT-CAC) method to enrich and separate target cells is described. Open tubular capillaries coated with anti-CD4, anti-CD14, or anti-CD19 antibodies were used as affinity chromatography columns to separate target blood cells. Cells were eluted using either shear force or bubbles. Bubbles were used to elute the captured cells without diluting the captured cells appreciably, while maintaining viability (the viability of the recovered cells was 85.83 +/- 7.34%; the viability of the cells was 90.41 +/- 3.49% before separation). Several aspects of the OT-CAC method were studied, such as the affinity of one antibody between two different cell lines, the effect of shear force, and the recovery of captured cells. Single- and multicell type separations were demonstrated by isolating CD4+ cells with antiCD4 coated capillary and isolating CD4+ and CD19+ cells with two capillaries in tandem from blood samples. In the one cell type isolation test, an average of 87.7% of the recovered cells from antiCD4 capillary were lymphocytes and an average of 97.7% of those lymphocytes were CD4+ cells. In the original blood sample, only 14.2% of the leukocytes were CD4+ cells. Two capillary columns were also run in tandem, separating two blood cell types from a single sample with high purity. The use of different elution shear forces was demonstrated to selectively elute one cell type. This method is an inexpensive, rapid, and effective method to separate target cells from blood samples.

Fluorescence Correlation Spectroscopy: A Review of Biochemical and Microfluidic Applications

Over the years fluorescence correlation spectroscopy (FCS) has proven to be a useful technique that has been utilized in several fields of study. Although FCS initially suffered from poor signal-to-noise ratios, the incorporation of confocal microscopy has overcome this drawback and transformed FCS into a sensitive technique with high figures of merit. In addition, tandem methods have evolved to include dual-color cross-correlation, total internal reflection fluorescence correlation, and fluorescence lifetime correlation spectroscopy combined with time-correlated single-photon counting. In this review, we discuss several applications of FSC for biochemical, micro-fluidic, and cellular investigations.

A review of chemical gradient systems for cell analysis.

Microfluidic spatial and temporal gradient generators have played an important role in many biological assays such as in the analysis of wound healing, inflammation, and cancer metastasis. Chemical gradient systems can also be applied to other fields such as drug design, chemical synthesis, chemotaxis, etc. Microfluidic systems are particularly amenable to gradient formation, as the length scales used in chips enable fluid processes that cannot be conducted in bulk scale. In this review we discuss new microfluidic devices for gradient generation and applications of those systems in cell analysis.

Rubidium isotope measurements in solid samples by laser ablation-laser atomic absorption spectroscopy

Abstract Laser atomic absorption was used to measure the rubidium isotopes in a laser-induced plasma. An 85 Rb/ 87 Rb isotope ratio of 2.7±0.2 was determined in solid calcium carbonate samples. A Nd:YAG laser was used to produce the plasma on the surface of solid samples placed inside a low pressure chamber with a controlled atmosphere of 150 mtorr to 10 torr. The plasma conditions were optimized in order to provide the best sensitivity and resolution. A narrowband Ti:Sapphire laser was scanned across the 780.02-nm transition of the rubidium isotopes. The resolved isotope spectrum is shown, as well as the isotope selective calibration plots. A detection limit of 25 ppm for the individual isotopes was obtained. The optimization studies and the likely mechanisms of line broadening are discussed.