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Dive into the research topics where Dmitrii I. Levitsky is active.

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Featured researches published by Dmitrii I. Levitsky.


FEBS Journal | 2007

Small heat shock protein Hsp27 prevents heat-induced aggregation of F-actin by forming soluble complexes with denatured actin

Anastasia V. Pivovarova; Natalia A. Chebotareva; Ivan S. Chernik; Nikolai B. Gusev; Dmitrii I. Levitsky

Previously, we have shown that the small heat shock protein with apparent molecular mass 27 kDa (Hsp27) does not affect the thermal unfolding of F‐actin, but effectively prevents aggregation of thermally denatured F‐actin [Pivovarova AV, Mikhailova VV, Chernik IS, Chebotareva NA, Levitsky DI & Gusev NB (2005) Biochem Biophys Res Commun331, 1548–1553], and supposed that Hsp27 prevents heat‐induced aggregation of F‐actin by forming soluble complexes with denatured actin. In the present work, we applied dynamic light scattering, analytical ultracentrifugation and size exclusion chromatography to examine the properties of complexes formed by denatured actin with a recombinant human Hsp27 mutant (Hsp27–3D) mimicking the naturally occurring phosphorylation of this protein at Ser15, Ser78, and Ser82. Our results show that formation of these complexes occurs upon heating and accompanies the F‐actin thermal denaturation. All the methods show that the size of actin–Hsp27‐3D complexes decreases with increasing Hsp27‐3D concentration in the incubation mixture and that saturation occurs at approximately equimolar concentrations of Hsp27‐3D and actin. Under these conditions, the complexes exhibit a hydrodynamic radius of ∼ 16 nm, a sedimentation coefficient of 17–20 S, and a molecular mass of about 2 MDa. It is supposed that Hsp27‐3D binds to denatured actin monomers or short oligomers dissociated from actin filaments upon heating and protects them from aggregation by forming relatively small and highly soluble complexes. This mechanism might explain how small heat shock proteins prevent aggregation of denatured actin and by this means protect the cytoskeleton and the whole cell from damage caused by accumulation of large insoluble aggregates under heat shock conditions.


Biochemistry | 2011

Tropomyosin: Double helix from the protein world

I. A. Nevzorov; Dmitrii I. Levitsky

This review concerns the structure and functions of tropomyosin (TM), an actin-binding protein that plays a key role in the regulation of muscle contraction. The TM molecule is a dimer of α-helices, which form a coiled-coil. Recent views on the TM structure are analyzed, and special attention is concentrated on those structural traits of the TM molecule that distinguish it from the other coiled-coil proteins. Modern data are presented on TM functional properties, such as its interaction with actin and ability to move on the surface of actin filaments, which underlies the regulation of the actin-myosin interaction upon contraction of skeletal and cardiac muscles. Also, part of the review is devoted to analysis of the effects of mutations in TM genes associated with muscle diseases (myopathies) on the structure and functions of TM.


Biophysical Chemistry | 2009

Thermally induced structural changes of intrinsically disordered small heat shock protein Hsp22.

Alexey S. Kazakov; Denis I. Markov; Nikolai B. Gusev; Dmitrii I. Levitsky

We applied different methods (differential scanning calorimetry, circular dichroism, Fourier transform infrared spectroscopy, and intrinsic fluorescence) to investigate the thermal-induced changes in the structure of small heat shock protein Hsp22. It has been shown that this protein undergoes thermal-induced unfolding that occurs within a very broad temperature range (from 27 degrees C to 80 degrees C and above), and this is accompanied by complete disappearance of alpha-helices, significant decrease in beta-sheets content, and by pronounced changes in the intrinsic fluorescence. The results confirm predictions that Hsp22 belongs to the family of intrinsically disordered proteins (IDP) with certain parts of its molecule (presumably, in the alpha-crystallin domain) retaining folded structure and undergoing reversible thermal unfolding. The results are also discussed in terms of downhill folding scenario.


FEBS Letters | 2008

Small heat shock protein Hsp27 protects myosin S1 from heat‐induced aggregation, but not from thermal denaturation and ATPase inactivation

Denis I. Markov; Anastasia V. Pivovarova; Ivan S. Chernik; Nikolai B. Gusev; Dmitrii I. Levitsky

MINT‐6490863, MINT‐6490872: LC1 (S1) (uniprotkb:P02602), Myosin subfragment 1 (S1) (uniprotkb:P02562) and Hsp27 (uniprotkb:P04792) physically interact (MI:0218) by dynamic light scattering (MI:0038) MINT‐6490833: LC1 (S1) (uniprotkb:P02602), Myosin subfragment 1 (S1) (uniprotkb:P02562) and Hsp27 (uniprotkb:P04792) physically interact (MI:0218) by cosedimentation (MI:0027) MINT‐6490770, MINT‐6490782: LC1 (S1) (uniprotkb:P02602), Myosin subfragment 1 (S1) (uniprotkb:P02562) and Hsp27 (uniprotkb:P04792) physically interact (MI:0218) by light scattering (MI:0067)


FEBS Journal | 2008

Thermal unfolding and aggregation of actin.

Dmitrii I. Levitsky; Anastasiya V. Pivovarova; Valeria V. Mikhailova; Olga P. Nikolaeva

Actin is one of the most abundant proteins in nature. It is found in all eukaryotes and plays a fundamental role in many diverse and dynamic cellular processes. Also, actin is one of the most ubiquitous proteins because actin‐like proteins have recently been identified in bacteria. Actin filament (F‐actin) is a highly dynamic structure that can exist in different conformational states, and transitions between these states may be important in cytoskeletal dynamics and cell motility. These transitions can be modulated by various factors causing the stabilization or destabilization of actin filaments. In this review, we look at actin stabilization and destabilization as expressed by changes in the thermal stability of actin; specifically, we summarize and analyze the existing data on the thermal unfolding of actin as measured by differential scanning calorimetry. We also analyze in vitro data on the heat‐induced aggregation of actin, the process that normally accompanies actin thermal denaturation. In this respect, we focus on the effects of small heat shock proteins, which can prevent the aggregation of thermally denatured actin with no effect on actin thermal unfolding. As a result, we have proposed a mechanism describing the thermal denaturation and aggregation of F‐actin. This mechanism explains some of the special features of the thermal unfolding of actin filaments, including the effects of their stabilization and destabilization; it can also explain how small heat shock proteins protect the actin cytoskeleton from damage caused by the accumulation of large insoluble aggregates under heat shock conditions.


Biophysical Journal | 1999

Effects of SH1 and SH2 Modifications on Myosin Similarities and Differences

Elena Bobkova; Andrey A. Bobkov; Dmitrii I. Levitsky; Emil Reisler

The properties of myosin modified at the SH2 group (Cys-697) were studied and compared with the previously reported properties of myosin modified at the SH1 group (Cys-707). 4-[N-[(iodoacetoxy)ethyl]-N methylamino]-7-nitrobenz-2-oxa-1, 3-diazole (IANBD) was used for selective modification of the SH2 group on myosin. SH2-labeled heavy meromyosin (SH2-HMM), similar to SH1-labeled HMM (SH1-HMM), did not propel actin filaments in the in vitro motility assays. SH1- and SH2-HMM produced similar amounts of load in the mixtures with unmodified HMM; the sliding speed of actin filaments gradually decreased with an increase in the fraction of either one of the modified HMMs in the mixture. In analogy to SH1-labeled myosin subfragment 1 (SH1-S1), SH2-labeled S1 (SH2-S1) activated regulated actin in the in vitro motility assays. SH2 modification inhibited Mg-ATPase of S1 and its activation by actin. The weak binding of S1 to actin was unaffected whereas the strong binding was weakened by SH2 modification. Overall, our results demonstrate similar behavior of SH1- and SH2-modified myosin heads in the in vitro motility assays despite some differences in their enzymatic properties. The effects of these modifications are ascribed to the location of the SH1-SH2 helix relative to other functional centers of S1.


Biochimica et Biophysica Acta | 2008

Mechanism of thermal aggregation of yeast alcohol dehydrogenase I Role of intramolecular chaperone

Kira A. Markossian; Nikolay V. Golub; Helen A. Khanova; Dmitrii I. Levitsky; Nikolay B. Poliansky; Konstantin O. Muranov; Boris I. Kurganov

Kinetics of thermal aggregation of yeast alcohol dehydrogenase I (yADH) have been studied using dynamic light scattering at a fixed temperature (56 degrees C) and under the conditions where the temperature was elevated at a constant rate (1 K/min). The initial parts of the dependences of the hydrodynamic radius on time (or temperature) follow the exponential law. At rather high values of time splitting of the population of aggregates into two components occurs. It is assumed that such peculiarities of the kinetics of thermal aggregation of yADH are due to the presence of a sequence -YSGVCHTDLHAWHGDWPLPVK- in the polypeptide chain possessing chaperone-like activity. Thermodynamic parameters for thermal denaturation of yADH have been calculated from the differential scanning calorimetry data.


FEBS Letters | 1995

The difference between ADP-beryllium fluoride and ADP-aluminium fluoride complexes of the spin-labeled myosin subfragment 1

Mikhail A. Ponomarev; Vladimir P. Timofeev; Dmitrii I. Levitsky

Electron paramagnetic resonance (EPR) spectroscopy was used for investigation of the structure of spin‐labeled myosin subfragment 1 (S1) containing ADP and phosphate analogues, such as orthovanadate, aluminium fluoride (AlF4), and beryllium fluoride (BeFx). It has been shown that the local conformational changes in the region of Cys‐707, induced by formation of the S1‐ADP‐BeFx complex, differ from those of S1 containing ADP‐AlF4 or other phosphate analogues but are similar to the changes which occur in the presence of ADP or ATPγS. It is suggested that S1‐ADP‐AlF4 and S1‐ADP‐BeFx complexes represent structural analogues of different transition states of the ATPase cycle, namely the intermediate states S1**‐ADP‐Pi and S1*‐ATP, respectively.


FEBS Journal | 2006

Thermal unfolding of smooth muscle and nonmuscle tropomyosin α-homodimers with alternatively spliced exons

Elena Kremneva; Olga P. Nikolaeva; Robin Maytum; Alexander M. Arutyunyan; Sergei Yu. Kleimenov; Michael A. Geeves; Dmitrii I. Levitsky

We used differential scanning calorimetry (DSC) and circular dichroism (CD) to investigate thermal unfolding of recombinant fibroblast isoforms of α‐tropomyosin (Tm) in comparison with that of smooth muscle Tm. These two nonmuscle Tm isoforms 5a and 5b differ internally only by exons 6b/6a, and they both differ from smooth muscle Tm by the N‐terminal exon 1b which replaces the muscle‐specific exons 1a and 2a. We show that the presence of exon 1b dramatically decreases the measurable calorimetric enthalpy of the thermal unfolding of Tm observed with DSC, although it has no influence on the α‐helix content of Tm or on the end‐to‐end interaction between Tm dimers. The results suggest that a significant part of the molecule of fibroblast Tm (but not smooth muscle Tm) unfolds noncooperatively, with the enthalpy no longer visible in the cooperative thermal transitions measured. On the other hand, both DSC and CD studies show that replacement of muscle exons 1a and 2a by nonmuscle exon 1b not only increases the thermal stability of the N‐terminal part of Tm, but also significantly stabilizes Tm by shifting the major thermal transition of Tm to higher temperature. Replacement of exon 6b by exon 6a leads to additional increase in the α‐Tm thermal stability. Thus, our data show for the first time a significant difference in the thermal unfolding between muscle and nonmuscle α‐Tm isoforms, and indicate that replacement of alternatively spliced exons alters the stability of the entire Tm molecule.


Archives of Biochemistry and Biophysics | 2008

Effect of mutations mimicking phosphorylation on the structure and properties of human 14-3-3ζ

Nikolai N. Sluchanko; Ivan S. Chernik; Alim S. Seit-Nebi; Anastasia V. Pivovarova; Dmitrii I. Levitsky; Nikolai B. Gusev

Effect of mutations mimicking phosphorylation on the structure of human 14-3-3zeta protein was analyzed by different methods. Mutation S58E increased intrinsic Trp fluorescence and binding of bis-ANS to 14-3-3. At low protein concentration mutation S58E increased the probability of dissociation of dimeric 14-3-3 and its susceptibility to proteolysis. Mutation S184E slightly increased Stokes radius and thermal stability of 14-3-3. Mutation T232E induced only small increase of Stokes radius and sedimentation coefficient that probably reflect the changes in the size or shape of 14-3-3. At low protein concentration the triple mutant S58E/S184E/T232E tended to dissociate, whereas at high concentration its properties were comparable with those of the wild type protein. The triple mutant was highly susceptible to proteolysis. Thus, mutation mimicking phosphorylation of Ser58 destabilized, whereas mutation of Ser184 induced stabilization of 14-3-3zeta structure.

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Galina V. Kopylova

Russian Academy of Sciences

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Boris I. Kurganov

Russian Academy of Sciences

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Denis I. Markov

Russian Academy of Sciences

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