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Dive into the research topics where Dominik Nickel is active.

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Featured researches published by Dominik Nickel.


Investigative Radiology | 2013

CAIPIRINHA-Dixon-TWIST (CDT)-volume-interpolated breath-hold examination (VIBE): a new technique for fast time-resolved dynamic 3-dimensional imaging of the abdomen with high spatial resolution.

Henrik J. Michaely; John N. Morelli; Johannes Budjan; Philipp Riffel; Dominik Nickel; Randall Kroeker; Stefan O. Schoenberg; Ulrike I. Attenberger

PurposeThe purpose of this study was to assess the feasibility and image quality of a novel, highly accelerated T1-weighted sequence for time-resolved imaging of the abdomen during the first pass of contrast media transit using controlled aliasing in parallel imaging results in higher acceleration (CAIPIRINHA) under sampling, view-sharing techniques, and Dixon water-fat separation (CAIPRINHA–Dixon–time-resolved imaging with interleaved stochastic trajectories–volumetric interpolated breath-hold examination [CDT-VIBE]). Materials and MethodsIn this retrospective, institutional review board–approved study, 47 patients (median age, 62 years; 25 men, 22 women) scanned on a 3.0-T magnetic resonance system (Skyra; Siemens) were included. The CDT-VIBE (repetition time/echo time1/echo time2, 4.1/1.33/2.56 milliseconds; acquisition time, 29 seconds) was used in place of the standard arterial phase acquisition and started 15 seconds after the injection of 0.1 mmol/kg Gd-DOTA (Dotarem, Guerbet). Within 29 seconds, 14 high spatial resolution (1.2 × 1.2 × 3 mm3) 3-dimensional data sets were acquired and reconstructed using view sharing (temporal resolution, 2.1 seconds). The CDT-VIBE images were evaluated independently by 2 blinded, experienced radiologists with regard to image quality and the number of hepatic arterial–dominant phases present on an ordinal 5-point scale (5, excellent; 1, nondiagnostic). Added diagnostic information with CDT-VIBE relative to portal venous phase VIBE was assessed. ResultsIn all patients, CDT-VIBE measurements were successfully acquired. The image quality was diagnostic in 46 of the 47 patients. Both readers assessed the highest image quality present in the data sets with a median score of 4 (range, 3–5 for both readers; &kgr;, 0.789) and the worst image quality with a median score of 3 (range, 1–4 for both readers; &kgr;, 0.689). With a range between 1 and 8 (median, 5), hepatic arterial–dominant data sets (of the 14 acquired) were obtained in each case. There was an added diagnostic value with CDT-VIBE in 10 of the 47 patients (21%). ConclusionsThe CDT-VIBE is a robust approach allowing, for the first time, dynamic imaging of the upper abdomen with high temporal resolution and preservation of high spatial resolution.


Journal of Magnetic Resonance Imaging | 2014

Clinical evaluation of CAIPIRINHA: Comparison against a GRAPPA standard

Katherine L. Wright; Michael W. Harrell; John A. Jesberger; Luis Landeras; Dean Nakamoto; Smitha Thomas; Dominik Nickel; Randall Kroeker; Mark A. Griswold; Vikas Gulani

To evaluate image quality when using a CAIPIRINHA sampling pattern in comparison to a standard GRAPPA sampling pattern in patients undergoing a routine three‐dimensional (3D) breathheld liver exam. CAIPIRINHA uses an optimized phase encoding sampling strategy to alter aliasing artifacts in 3D acquisitions to improve parallel imaging reconstruction.


Investigative Radiology | 2016

Optimized Fast Dynamic Contrast-Enhanced Magnetic Resonance Imaging of the Prostate: Effect of Sampling Duration on Pharmacokinetic Parameters.

Ahmed E. Othman; Florian Falkner; Petros Martirosian; Christina Schraml; Christian Schwentner; Dominik Nickel; Konstantin Nikolaou; Mike Notohamiprodjo

ObjectiveThe aim of this study was to evaluate the effect of sampling duration on pharmacokinetic parameters from dynamic contrast-enhanced (DCE) magnetic resonance imaging (MRI) and their diagnostic accuracy regarding the detection of potentially malignant prostate lesions. Materials and MethodsSixty-six consecutive male patients (mean [SD] age, 65.4 [10.8] years) with clinically suspected prostate cancer were included. All patients underwent multiparametric MRI of the prostate (T2-weighted imaging, diffusion-weighted imaging, and DCE-MRI) on a 3 T MRI scanner. Patients were divided into 2 groups depending on the prostate imaging reporting and data system (PI-RADS) score of the detected lesions (group A: PI-RADS ⩽3, n = 32; group B: PI-RADS >3, n = 34). In all patients, DCE-MRI was performed using a CAIPIRINHA-Dixon-TWIST volume interpolated breath-hold examination sequence (spatial resolution, 3 × 1.2 × 1.2 mm; temporal resolution, 5 seconds; total sampling duration, 4:10 minutes [250 seconds]) with body weight–adapted administration of contrast agent (gadobutrol, Bayer Healthcare, Berlin, Germany). Five DCE-MRI series with different acquisition durations ranging from 50 to 250 seconds were retrospectively generated from the original data sets. Pharmacokinetic parameters (ie, Ktrans, Kep, Ve, and iAUC60) were calculated for the different sampling durations using the Tofts model. Both lesion groups and all 5 DCE-MRI series were compared regarding pharmacokinetic parameters. Diagnostic accuracy for the detection of potentially malignant lesions was calculated for all 5 series using receiver operating characteristic analysis. ResultsFor all 5 series, Ktrans, Kep, and iAUC60 in patient group B were significantly higher than the respective parameters in patient group A (all P ⩽ 0.008). In both groups, Ktrans, Kep, and iAUC60 remained constant at 200 and 150 seconds acquisition duration and did not significantly differ from parameters estimated from the original data sets (250 seconds; all P ≥ 0.310). Ve did not differ significantly between the 2 groups (P ≥ 0.337) and acquisition time did not have a significant effect on this parameter (P ≥ 0.275). Receiver operating characteristic analyses showed consistent diagnostic accuracy for the different series; only diagnostic accuracy of Kep decreased with lowered sampling duration, showing lowest accuracy for the 50-second series (0.682; 95% confidence interval, 0.553–0.811). ConclusionsUsing fast optimized DCE-MRI of the prostate, a minimum sampling duration of 150 seconds is required for sufficient pharmacokinetic parameter estimates, providing a high diagnostic accuracy regarding the discrimination between benign and potentially malignant lesions.


European Journal of Radiology | 2015

Feasibility of CAIPIRINHA-Dixon-TWIST-VIBE for dynamic contrast-enhanced MRI of the prostate.

Ahmed E. Othman; Petros Martirosian; Christina Schraml; Jana Taron; Jakob Weiss; Georg Bier; Christian Schwentner; Dominik Nickel; Fabian Bamberg; Ulrich Kramer; Konstantin Nikolaou; Mike Notohamiprodjo

PURPOSE To evaluate the feasibility of a CAIPIRINHA-Dixon-TWIST (CDT)-VIBE sequence for improving image quality and temporal resolution in dynamic contrast-enhanced MRI (DCE-MRI) of the prostate. MATERIAL AND METHODS 44 male patients (age 63.9 ± 8.9 years) with clinically suspected prostate cancer underwent DCE-MRI at a 3T MRI scanner (Magnetom Skyra, Siemens Healthcare, Erlangen, Germany) using a CDT-VIBE sequence (spatial resolution=3×1.2×1.2mm(3), temporal resolution=5s, total scan duration=4:10 min) with body-weight-adapted administration of contrast agent (Gadobutrol, Bayer Healthcare, Berlin, Germany). To investigate effects on image quality, the same sequence was acquired three times per patient during the late phase: 1. with the same protocol as in the arterial phase (VS5), 2. without view-sharing (no view-sharing, NVS) using a 2-fold CAIPIRINHA acceleration R=2 (temporal resolution=15s, NVS15) and 3. NVS using a 6-fold CAIPIRINHA acceleration R=6 (temporal resolution=5s, NVS5). SNR and CNR were evaluated with the subtraction method. Image quality of the three sequences (VS5, NVS15, NVS5) was subjectively assessed by 2 blinded radiologists using a 5-point Likert scale (5 being excellent). Perfusion profiles of visually normal prostate and of malignant lesions as characterized by Wash-In, Wash-Out, time-to-peak (TTP) and initial area under the curve (iAUC) from the original datasets (temporal resolution=5s) and from datasets with a downsampled temporal resolution (15s) were compared. RESULTS In 20 of 44 included patients, potentially malignant lesions were identified in which 16 had histologically confirmed prostate cancer. SNR was highest for VS5 and NVS15, and lowest for NVS5 (p <.001). Concordantly, subjective image quality was comparable for VS5 and NVS15 (sum score 23.20 ± 1.03 vs 23.53 ± 1.34) and significantly lower for NVS5 (sum score 9.83 ± 2.32; p<.001). Perfusion parameters of macroscopically normal prostate tissue and suspect lesions differed significantly between original datasets and datasets with simulated lower temporal resolution, with the latter showing higher Wash-In (p=.002), lower Wash-Out (p=.003), higher Time-to-Peak (p<.001) and lower iAUC (p<.001). CONCLUSION CDT-VIBE can be readily exploited for DCE-MRI of the prostate preserving the diagnostic image quality while providing high temporal resolution for quantitative diagnostic assessment of enhancement curves in malignant lesions.


Scientific Reports | 2017

Gd-EOB-DTPA-enhanced MRI for evaluation of liver function: Comparison between signal-intensity-based indices and T1 relaxometry

Michael Haimerl; Niklas Verloh; Florian Zeman; Claudia Fellner; Dominik Nickel; Sven A. Lang; Andreas Teufel; Christian Stroszczynski; Phillipp Wiggermann

Gadolinium ethoxybenzyl-diethylenetriaminepentaacetic acid (Gd-EOB-DTPA) is a paramagnetic hepatobiliary magnetic resonance (MR) contrast agent. Due to its OATP1B1/B3-dependent hepatocyte-specific uptake and paramagnetic properties increasing evidence has emerged to suggest that Gd-EOB-DTPA-enhanced MRI can be potentially used for evaluation of liver function. In this paper we compare the diagnostic performance of Gd-EOB-DTPA-enhanced relaxometry-based and commonly used signal-intensity (SI)-based indices, including the hepatocellular uptake index (HUI) and SI-based indices corrected by spleen or muscle, for evaluation of liver function, determined using the Indocyanin green clearance (ICG) test. Simple linear regression model showed a significant correlation of the plasma disappearance rate of ICG (ICG-PDR) with all Gd-EOB-DTPA-enhanced MRI-based liver function indices with a significantly better correlation of relaxometry-based indices on ICG-PDR compared to SI-based indices. Among SI-based indices, HUI achieved best correlation on ICG-PDR and no significant difference of respective correlations on ICG-PDR could be shown. Assessment of liver volume and consecutive evaluation of multiple linear regression model revealed a stronger correlation of ICG-PDR with both (SI)-based and T1 relaxometry-based indices. Thus, liver function can be estimated quantitatively from Gd-EOB-DTPA–enhanced MRI-based indices. Here, indices derived from T1 relaxometry are superior to SI-based indices, and all indices benefit from taking into account respective liver volumes.


Magnetic Resonance Imaging | 2016

Comparison of CAIPIRINHA-VIBE, Radial-VIBE, and conventional VIBE sequences for dynamic contrast-enhanced (DCE) MRI: A validation study using a DCE-MRI phantom

Bohyun Kim; Chang Kyung Lee; Nieun Seo; Seung Soo Lee; Jeong Kon Kim; Yoon-Seok Choi; Dong-Cheol Woo; In Seong Kim; Dominik Nickel; Kyung Won Kim

OBJECTIVE To validate radial acquisition of volumetric interpolated breath hold examination (Radial-VIBE) and the controlled aliasing in parallel imaging results in higher acceleration (CAIPIRINHA-VIBE) sequences for dynamic contrast-enhanced MRI (DCE-MRI) by comparing them to conventional VIBE sequence using a phantom. METHODS On a DCE-MRI phantom containing various concentrations of NiCl2 solutions, six minutes of dynamic series and T1 mapping with variable flip angle methods were acquired using conventional VIBE, Radial-VIBE, and CAIPIRINHA-VIBE sequences on 3.0-T scanners. Signal stability and signal linearity were tested for dynamic series and the precision of R1 values were tested for T1 mapping series. The scans were repeatedly performed at two weeks and three months to test repeatability/reproducibility, assessed by within-subject coefficient of variation (WSCV). RESULTS Signal stability over six minutes was excellent in all three sequences. Regarding the signal linearity, CAIPIRINHA-VIBE demonstrated the highest linear correlation (r=0.963), followed by conventional VIBE (r=0.959) and Radial-VIBE (r=0.953). Regarding the R1 precision, CAIPIRINHA-VIBE (r=0.985) was the most accurate, followed by conventional VIBE (r=0.861) and Radial-VIBE (r=0.442). CAIPIRINHA-VIBE showed excellent repeatability/reproducibility (WSCV, 1.79-6.71%) compared with Radial-VIBE (WSCV, 2.04-67.2%) and conventional VIBE (WSCV, 3.4-31.9%). CONCLUSION In terms of signal stability, signal linearity, R1 precision, and repeatability/reproducibility, CAIPIRINHA-VIBE demonstrated outstanding performance for DCE-MRI compared with Radial-VIBE and conventional VIBE.


medical image computing and computer assisted intervention | 2015

Robust Spectral Denoising for Water-Fat Separation in Magnetic Resonance Imaging

Felix Lugauer; Dominik Nickel; Jens Wetzl; Stephan Kannengiesser; Andreas K. Maier; Joachim Hornegger

Fat quantification based on the multi-echo Dixon method is gaining importance in clinical practice as it can match the accuracy of spectroscopy but provides high spatial resolution. Accurate quantification protocols, though, are limited to low SNR and suffer from a high noise bias. As the clinically relevant water and fat components are estimated by fitting a non-linear signal model to the data, the uncertainty is further amplified. In this work, we first establish the low-rank property and its locality assumptions for water-fat MRI and, consequently, propose a model-consistent but adaptive spectral denoising. A robust noise estimation in combination with a risk-minimizing threshold adds to a fully-automatic method. We demonstrate its capabilities on abdominal fat quantification data from in-vivo experiments. The denoising reduces the fit error on average by 37% and the uncertainty of the fat fraction by 58% in comparison to the original data while being edge-preserving.


Scientific Reports | 2017

Gd-EOB-DTPA-enhanced MR relaxometry for the detection and staging of liver fibrosis

Michael Haimerl; Kirsten Utpatel; Niklas Verloh; Florian Zeman; Claudia Fellner; Dominik Nickel; Andreas Teufel; Stefan Fichtner-Feigl; Matthias Evert; Christian Stroszczynski; Phillipp Wiggermann

Gd-EOB-DTPA, a liver-specific contrast agent with T1-shortening effects, is routinely used in clinical routine for detection and characterization of focal liver lesions and has recently received increasing attention as a tool for the quantitative analyses of liver function. We report the relationship between the extent of Gd-EOB-DTPA- induced T1 relaxation and the degree of liver fibrosis, which was assessed according to the METAVIR score. For the T1 relaxometry, a transverse 3D VIBE sequence with inline T1 calculation was acquired prior to and 20 minutes after Gd-EOB-DTPA administration. The reduction rates of the T1 relaxation time (rrT1) between the pre- and postcontrast images were calculated, and the optimal cutoff values for the fibrosis stages were determined with receiver operating characteristic (ROC) curve analyses. The rrT1 decreased with the severity of liver fibrosis and regression analysis revealed a significant correlation of the rrT1 with the stage of liver fibrosis (r = −0.906, p < 0.001). ROC analysis revealed sensitivities ≥78% and specificities ≥94% for the differentiation of different fibrosis stages. Gd-EOB-DTPA–enhanced T1 relaxometry is a reliable tool for both the detection of initial hepatic fibrosis and the staging of hepatic fibrosis.


Korean Journal of Radiology | 2017

The Effects of Breathing Motion on DCE-MRI Images: Phantom Studies Simulating Respiratory Motion to Compare CAIPIRINHA-VIBE, Radial-VIBE, and Conventional VIBE

Chang Kyung Lee; Nieun Seo; Bohyun Kim; Jimi Huh; Jeong Kon Kim; Seung Soo Lee; In Seong Kim; Dominik Nickel; Kyung Won Kim

Objective To compare the breathing effects on dynamic contrast-enhanced (DCE)-MRI between controlled aliasing in parallel imaging results in higher acceleration (CAIPIRINHA)-volumetric interpolated breath-hold examination (VIBE), radial VIBE with k-space-weighted image contrast view-sharing (radial-VIBE), and conventional VIBE (c-VIBE) sequences using a dedicated phantom experiment. Materials and Methods We developed a moving platform to simulate breathing motion. We conducted dynamic scanning on a 3T machine (MAGNETOM Skyra, Siemens Healthcare) using CAIPIRINHA-VIBE, radial-VIBE, and c-VIBE for six minutes per sequence. We acquired MRI images of the phantom in both static and moving modes, and we also obtained motion-corrected images for the motion mode. We compared the signal stability and signal-to-noise ratio (SNR) of each sequence according to motion state and used the coefficients of variation (CoV) to determine the degree of signal stability. Results With motion, CAIPIRINHA-VIBE showed the best image quality, and the motion correction aligned the images very well. The CoV (%) of CAIPIRINHA-VIBE in the moving mode (18.65) decreased significantly after the motion correction (2.56) (p < 0.001). In contrast, c-VIBE showed severe breathing motion artifacts that did not improve after motion correction. For radial-VIBE, the position of the phantom in the images did not change during motion, but streak artifacts significantly degraded image quality, also after motion correction. In addition, SNR increased in both CAIPIRINHA-VIBE (from 3.37 to 9.41, p < 0.001) and radial-VIBE (from 4.3 to 4.96, p < 0.001) after motion correction. Conclusion CAIPIRINHA-VIBE performed best for free-breathing DCE-MRI after motion correction, with excellent image quality.


Investigative Radiology | 2017

Dynamic Liver Magnetic Resonance Imaging in Free-Breathing: Feasibility of a Cartesian T1-Weighted Acquisition Technique With Compressed Sensing and Additional Self-Navigation Signal for Hard-Gated and Motion-Resolved Reconstruction

Benjamin Kaltenbach; Andreas M. Bucher; Julian L. Wichmann; Dominik Nickel; Christoph Polkowski; Renate Hammerstingl; Thomas Vogl; Boris Bodelle

Objectives The aim of this study was to assess the feasibility of a free-breathing dynamic liver imaging technique using a prototype Cartesian T1-weighted volumetric interpolated breathhold examination (VIBE) sequence with compressed sensing and simultaneous acquisition of a navigation signal for hard-gated and motion state–resolved reconstruction. Materials and Methods A total of 43 consecutive oncologic patients (mean age, 66 ± 11 years; 44% female) underwent free-breathing dynamic liver imaging for the evaluation of liver metastases from colorectal cancer using a prototype Cartesian VIBE sequence (field of view, 380 × 345 mm2; image matrix, 320 × 218; echo time/repetition time, 1.8/3.76 milliseconds; flip angle, 10 degrees; slice thickness, 3.0 mm; acquisition time, 188 seconds) with continuous data sampling and additionally acquired self-navigation signal. Data were iteratively reconstructed using 2 different approaches: first, a hard-gated reconstruction only using data associated to the dominating motion state (CS VIBE, Compressed Sensing VIBE), and second, a motion-resolved reconstruction with 6 different motion states as additional image dimension (XD VIBE, eXtended dimension VIBE). Continuous acquired data were grouped in 16 subsequent time increments with 11.57 seconds each to resolve arterial and venous contrast phases. For image quality assessment, both CS VIBE and XD VIBE were compared with the patients last staging dynamic liver magnetic resonance imaging including a breathhold (BH) VIBE as reference standard 4.5 ± 1.2 months before. Representative quality parameters including respiratory artifacts were evaluated for arterial and venous phase images independently, retrospectively and blindly by 3 experienced radiologists, with higher scores indicating better examination quality. To assess diagnostic accuracy, same readers evaluated the presence of metastatic lesions for XD VIBE and CS VIBE compared with reference BH examination in a second session. Results Compared with CS VIBE, XD VIBE showed significantly higher overall image quality for both arterial phase (4.2 ± 0.6 vs 3.8 ± 0.7, P = 0.008) and venous phase (4.7 ± 0.4 vs 4.3 ± 0.7, P < 0.001) imaging. There was no significant difference between XD VIBE and BH VIBE for overall image quality in the venous phase (4.7 ± 0.4 vs 4.8 ± 0.4, P = 0.834), whereas arterial phase images were scored slightly lower for XD VIBE (4.5 ± 0.6 vs 4.2 ± 0.6, P = 0.024). Both XD VIBE and BH VIBE were characterized by a very low level of respiratory artifacts with no significant difference between BH and motion-resolved free-breathing strategy (P = 0.505 for arterial phase; P = 0.496 for venous phase). Compared with CS VIBE, obvious quality improvement could be achieved for the extended XD VIBE reconstruction with significantly reduced motion artifacts for venous phase images (P = 0.007). Generally, arterial phase images were scored slightly lower compared with venous phase images when using the free-breathing protocol. Overall, 98% of all metastatic lesions were identified on XD VIBE images and 92% of all metastases were found on CS VIBE. Conclusions Dynamic liver imaging using the proposed free-breathing Cartesian strategy is feasible in oncologic patients with excellent image quality, high respiratory motion robustness, and accurate lesion detection. Overall, XD VIBE was superior to CS VIBE in our study.

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Felix Lugauer

University of Erlangen-Nuremberg

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Andreas K. Maier

University of Erlangen-Nuremberg

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Florian Zeman

University of Regensburg

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