Dubravko Sabo
Sandia National Laboratories
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Publication
Featured researches published by Dubravko Sabo.
Molecular Simulation | 2006
Dubravko Sabo; Susan B. Rempe; Jeffery A. Greathouse; Marcus G. Martin
We report on our studies of the structural properties of a hydrogen molecule dissolved in liquid water. The radial distribution function, coordination number and coordination number distribution are calculated using different representations of the interatomic forces within molecular dynamics (MD), Monte Carlo (MC) and ab initio molecular dynamics (AIMD) simulation frameworks. Although structural details differ in the radial distribution functions generated from the different force fields, all approaches agree that the average and most probable number of water molecules occupying the inner hydration sphere around hydrogen is 16. Furthermore, all results exclude the possibility of clathrate-like organization of water molecules around the hydrophobic molecular hydrogen solute.
Journal of Physical Chemistry B | 2015
Mangesh I. Chaudhari; Dubravko Sabo; Lawrence R. Pratt; Susan B. Rempe
Molecular dynamics simulations of water with both multi-Kr and single Kr atomic solutes are carried out to implement quasi-chemical theory evaluation of the hydration free energy of Kr(aq). This approach obtains free energy differences reflecting Kr-Kr interactions at higher concentrations. Those differences are negative changes in hydration free energies with increasing concentrations at constant pressure. The changes are due to a slight reduction of packing contributions in the higher concentration case. The observed Kr-Kr distributions, analyzed with the extrapolation procedure of Krüger et al., yield a modestly attractive osmotic second virial coefficient, B2 ≈ -60 cm(3)/mol. The thermodynamic analysis interconnecting these two approaches shows that they are closely consistent with each other, providing support for both approaches.
Journal of Molecular Biology | 2008
Sameer Varma; Dubravko Sabo; Susan B. Rempe
Journal of Physical Chemistry B | 2008
Dubravko Sabo; Sameer Varma; Marcus G. Martin; Susan B. Rempe
Archive | 2015
Mangesh I. Chaudhari; Susan B. Rempe; Lawrence R. Pratt; D. Asthagiri; Liang Tan; Dubravko Sabo
The Royal Society of Chemistry | 2013
Susan B. Rempe; Dubravko Sabo; Dian Jiao; Sameer Varma; Lawrence R. Pratt
Archive | 2013
Dubravko Sabo; D. Jiao; Sameer Varma; Susan B. Rempe
Pccp | 2008
Dubravko Sabo; Sameer Varma; Lawrence R. Pratt; Susan B. Rempe
Archive | 2008
Dubravko Sabo; Sameer Varma; Susan B. Rempe
Archive | 2008
Sameer Varma; Dubravko Sabo; Susan B. Rempe