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Dive into the research topics where E. M. Dorokhova is active.

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Featured researches published by E. M. Dorokhova.


Amino Acids | 2003

New development in the tritium labelling of peptides and proteins using solid catalytic isotopic exchange with spillover-tritium.

Yu. A. Zolotarev; A. K. Dadayan; E. V. Bocharov; Yu. A. Borisov; B. V. Vaskovsky; E. M. Dorokhova; N. F. Myasoedov

Summary. The mechanism of the reaction of high temperature solid state catalytic isotope exchange (HSCIE) of hydrogen in peptides with spillover-tritium at 140–180°C was analyzed. This reaction was used for preparing [3H]enkephalins such as [3H]DALG with specific activity of 138 Ci/mmol and [3H]LENK with specific activity of 120 Ci/mmol at 180°C. The analogues of [3H]ACTG4–10 with specific activity of 80 Ci/mmol, [3H]zervamicin IIB with specific activity of 70 Ci/mmol and [3H]conotoxin G1 with specific activity 35 Ci/mmol were produced. The obtained preparations completely retained their biological activity. [3H]Peptide analysis using 3H NMR spectroscopy on a Varian UNITY-600 spectrometer at 640 MHz was carried out. The reaction ability of amino fragments in HSCIE was shown to depend both of their structures and on the availability and the mobility of the peptide chain. The reaction of HSCIE with the β-galactosidase from Termoanaerobacter ethanolicus was studied. The selected HSCIE conditions allow to prepare [3H] β-galactosidase with specific activity of 1440 Ci/mmol and completely retained its the enzymatic activity.


Amino Acids | 1995

The solid-state catalytic synthesis of tritium labeled amino acids, peptides and proteins.

Yu. A. Zolotarev; E. M. Dorokhova; V. N. Nezavibatko; Yu. A. Borisov; S. G. Rosenberg; G. A. Velikodvorskaia; L. V. Neumivakin; Vladimir V. Zverlov; N. F. Myasoedov

SummaryNew catalytic reaction between a solid bioorganic compound and activated spillover tritium (ST), based on High-temperature Solid-state Catalytic Isotopic Exchange (HSCIE) was examined. The HSCIE mechanism and determination of the reactivity of hydrogen atoms in amino acids, peptides and proteins was investigated. Quantum mechanical calculations of the reactivity of hydrogen atoms in amino acids in the HSCIE reaction were done. The carbon atom with a greater proton affinity undergoes a greater exchange of hydrogen for tritium in HSCIE. The electrofilic nature of spillover hydrogen in the reaction of HSCIE was revealed. The isotope exchange between ST and the hydrogen of the solid organic compound proceeds with a high degree of configuration retention at the carbon atoms. The HSCIE reaction enables to synthesize tritium labeled proteins with a specific activity of 20–30 mCi/mg and kept biological activity.


Journal of Radioanalytical and Nuclear Chemistry | 1992

HIGH TEMPERATURE SOLID STATE CATALYTIC ISOTOPE EXCHANGE WITH DEUTERIUM AND TRITIUM

Yu. A. Zolotarev; V. S. Kozik; E. M. Dorokhova; D.A. Zaitsev; N. F. Myasoedov; S. G. Rozenberg

A method for synthesizing tritium- or deuterium-labeled amino acids, peptides and biogenic amines through high temperature solid state catalytic isotope exchange (HSCIE) is proposed. The dependence of the degree of isotope exchange in HSCIE on the structure of the compound, the reactivity of hydrogen at different carbon atoms and the conditions of the process has been examined. If HSCIE is performed in the temperature range of 373 to 413K, the selectivity of isotopic label incorporation comes to 70% or higher. When the tritium label is introduced into peptides, they retain the configuration of asymmetric atoms, even upon the substitution of tritium for hydrogen at the α-carbon atoms of the amino acid residues. HSCIE at 453–513K leads to an even distribution of the isotopic label over the organic compound molecule. The results of3H NMR spectroscopy highlighting the distribution of the tritium label in the organic compound molecules are presented. The configuration of asymmetric atoms in amino acids is preserved to a high extent upon 80–90% substitution of isotopes for hydrogen atoms.


Amino Acids | 2006

Degradation of the ACTH(4-10) analog Semax in the presence of rat basal forebrain cell cultures and plasma membranes.

Yu. A. Zolotarev; O. V. Dolotov; L. S. Inozemtseva; A. K. Dadayan; E. M. Dorokhova; L. A. Andreeva; L. Yu. Alfeeva; I. A. Grivennikov; N. F. Myasoedov

Summary.Here a new approach of the elucidation of paths of proteolytic biodegradation of physiologically active peptides, based on the use of a peptide with isotopic label at all amino acid residues and the enrichment of HPLC samples with unlabeled peptide fragments in UV-detectable concentration, has been proposed. The method has been applied for the investigation of degradation dynamics of the neuroactive heptapeptide MEHFPGP (Semax) in the presence of plasma membranes, and cultures of glial and neuronal cells obtained from the rat basal forebrain. The splitting away of ME and GP, and formation of pentapeptides are the predominant processes in the presence of all tested objects, whereas the difference in patterns of resulting peptide products for glial and neuronal cells has been detected. In conclusion, the approach applied allows analyzing physiologically active peptide concentrations in biological tissues and degradation pathways of peptides in the presence of targets of their action.


Russian Journal of Bioorganic Chemistry | 2006

Evenly tritium labeled peptides in study of peptide in vivo and in vitro biodegradation

Yu. A. Zolotarev; A. K. Dadayan; O. V. Dolotov; V. S. Kozik; N. V. Kost; O. Yu. Sokolov; E. M. Dorokhova; V. K. Meshavkin; L. S. Inozemtseva; M. V. Gabaeva; L. A. Andreeva; L. Yu. Alfeeva; T. S. Pavlov; K. E. Badmaeva; S. E. Badmaeva; Z. V. Bakaeva; G. N. Kopylova; G. E. Samonina; B. V. Vaskovsky; I. A. Grivennikov; A. A. Zozulya; N. F. Myasoedov

Biologically active peptides evenly labeled with tritium were used for studying the in vitro and in vivo biodegradation of the peptides. Tritium-labeled peptides with a specific radioactivity of 50–150 Ci/mmol were obtained by high temperature solid phase catalytic isotope exchange (HSCIE) with spillover tritium. The distribution of the isotope label among all amino acid residues of these peptides allows the simultaneous determination of practically all possible products of their enzymatic hydrolysis. The developed analytical method includes extraction of tritium-labeled peptides from organism tissues and chromatographic isolation of individual labeled peptides from the mixture of degradation products. The concentrations of a peptide under study and the products of its biodegradation were calculated from the results of liquid scintillation counting. This approach was used for studying the pathways of biodegradation of the heptapeptide TKPRPGP (Selank) and the tripeptide PGP in blood plasma. The pharmacokinetics of Selank, an anxiolytic peptide, was also studied in brain tissues using the intranasal in vivo administration of this peptide. The concentrations of labeled peptides were determined, and the pentapeptide TKPRP, tripeptide TKP, and dipeptides RP and GP were shown to be the major products of Selank biodegradation. The study of the biodegradation of the heptapeptide MEHFPGP (Semax) in the presence of nerve cells showed that the major products of its biodegradation are the pentapeptide HFPGP and tripeptide PGP. The enkephalinase activity of blood plasma was studied with the use of evenly tritium labeled [Leu]enkephalin. A high inhibitory effect of Semax on blood plasma enkephalinases was shown to arise from its action on aminopeptidases. The method, based on the use of evenly tritium-labeled peptides, allows the determination of peptide concentrations and the activity of enzymes involved in their degradation on a μg scale of biological samples both in vitro and in vivo.


Bioorganicheskaia khimiia | 2004

[The binding of Semax, ACTH 4-10 heptapeptide, to plasma membranes of the rat forebrain basal nuclei and its biodegradation].

O. V. Dolotov; Yu. A. Zolotarev; E. M. Dorokhova; L. A. Andreeva; L. Yu. Alfeeva; I. A. Grivennikov; N. F. Myasoedov

The binding characteristics of the peptide Semax (Met-Glu-His-Phe-Pro-Gly-Pro) to plasma membranes of basal nuclei of the rat forebrain and the dynamics of its degradation during its incubation with these membranes were studied. Binding of the homogeneously labeled [G-3H]Semax was shown to be time-dependent, specific, and reversible. Specific binding of the heptapeptide depended on calcium ions and was characterized by the dissociation constant of the ligand–receptor complex Kd 2.41 ± 1.02 × 10–9 M and by the concentration of binding sites Bmax 33.5 ± 7.9 × 10–15 mol/mg of protein. A method of studying Semax biodegradation in the presence of plasma membranes of rat brain was developed. It is based on the use of the peptide homogeneously labeled with tritium and on an HPLC analysis with UV detection at 220 and 254 nm of the peptide fragments formed. The half-life of Semax in the presence of the plasma membranes was demonstrated to be longer than 1 h. Dipeptidylaminopeptidases are considered to be the main enzymes responsible for its biodegradation; they successively cleave Semax to the HFPGP pentapeptide and the PGP tripeptide.


Russian Chemical Bulletin | 1997

Study of the solid-state hydrogen isotope exchange ofl-alanine

Yu. A. Zolotarev; E. V. Laskatelev; V. S. Kozik; E. M. Dorokhova; S. G. Rozenberg; Yu. A. Borisov; N. F. Myasoedov

The solid-state reaction of isotope exchange ofl-alanine (l-Ala) with spillover-hydrogen activated on a Rh(Pd)-supported catalyst was studied. The reactivity of the carbon atoms and the activation energies of isotope exchange of the hydrogen at the C(2) and C(3) atoms of thel-Ala molecule were determined using tritium NMR. Theab initio calculations of the activation energy of a model reaction between the alanine molecule and a hydroxonium cation were carried out. The mechanism and plausible structures of the transition states of this reaction were proposed.


Russian Journal of Bioorganic Chemistry | 2008

A comparative analysis of the distribution of glyprolines after their administration by different ways

I. P. Ashmarin; K. E. Baglikova; S. E. Edeeva; Yu. A. Zolotarev; V. S. Kozik; A. K. Dadayan; E. M. Dorokhova; L. Yu. Alfeeva; L. A. Andreeva; G. N. Kopylova; T. S. Pavlov; B. V. Vaskovsky; V. K. Meshavkin; O. Yu. Sokolov; N. V. Kost; A. A. Zozulya; G. E. Samonina; N. F. Myasoedov

The distribution of the glyprolines, Pro-Gly-Pro and Thr-Lys-Pro-Arg-Pro-Gly-Pro (Selanc), was analyzed and compared in tissues of rat organs after different ways of their administration using the peptides uniformly labeled with tritium. Comparative data on changes of concentrations of the peptides in the rat organs after their intraperitoneal, intranasal, intragastric, and intravenous administration are given. The intranasal administration of both peptides was shown to be optimal for delivery of glyprolines molecules in the CNS. A high affinity of the studied glyprolines for gastric tissues was found for all the ways of their administration. We suggest that high efficacy of action of glyprolines on homeostasis of the gastric mucosa was partially provided by accumulation of these peptides (to high concentrations) in gastric tissues.


Russian Journal of Bioorganic Chemistry | 2009

Solid phase reaction of hemoglobin with spillover hydrogen

Yu. A. Zolotarev; A. K. Dadayan; R. Kh. Ziganshin; Yu. A. Borisov; V. S. Kozik; E. M. Dorokhova; B. V. Vaskovsky; N. F. Myasoedov

The reaction of high-temperature solid-state catalytic isotope exchange (HSCIE) between bovine hemoglobin and spillover hydrogen (SH) was studied. It was shown that, in the field of subunit contact, there is a significant decrease in ability for hydrogen exchange by SH. A comparison of the distribution of the isotope label in the hemoglobin α-subunit was carried out for the HSCIE reaction with the hemoglobin complex and with the free α-subunit. To this end, enzymatic hydrolysis of protein under the action of trypsin was carried out. The separation of tritium-labeled tryptic peptides was achieved by HPLC. Changes in availability of polypeptide chain fragments caused by complex formation were calculated using a molecular model. The formation of the protein complex was shown to lead to a decrease in the ability of fragments of α-subunits MFLSFPTTK (A32−40) and VDPVNFK (A93−99) for hydrogen replacement by tritium by almost an order of magnitude; hence, their availability to water (1.4 Å) twice decreased on the average. The decrease in ability to an exchange of hydrogen by spillover tritium on the formation of hemoglobin complex was shown to be connected with a reduction in availability of polypeptide chain fragments participating in spatial interactions of subunits with each other. Thus, the HSCIE reaction can be used not only for the preparative obtaining of tritium-labeled compounds, but also for determining the contact area in the formation of protein complexes.


Russian Chemical Bulletin | 1997

Stereoselective effects in the solid-phase hydrogenation of unsaturatedl-hydroxyproline derivatives

Yu. A. Zolotarev; E. V. Laskatelev; V. S. Kozik; E. M. Dorokhova; S. G. Rozenberg; Yu. A. Borisov; N. F. Myasoedov

The solid-phase catalytic hydrogenation of (R-4tert-butoxy-Δ1-pyrroline-2-carboxylic) acid under the action of hydrogen spillover was studied. The reaction proceeds stereoselectively with the predominant formation of thel-amino acid. The configuration of the asymmetric center formed is determined by that of the asymmetric C(4) atom. The major portion of the isotope label is incorporated into the allylic C(3) and C(5) positions, and the β-H atoms are more mobile. Using quantum-chemical calculations, the geometric structure of thel-hydroxyproline molecule was calculated, and the spin-spin coupling constants for this tritium-labeled amino acid were determined.

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N. F. Myasoedov

Russian Academy of Sciences

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Yu. A. Zolotarev

Russian Academy of Sciences

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V. S. Kozik

Russian Academy of Sciences

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A. K. Dadayan

Russian Academy of Sciences

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Yu. A. Borisov

Russian Academy of Sciences

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B. V. Vaskovsky

Russian Academy of Sciences

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L. A. Andreeva

Russian Academy of Sciences

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L. Yu. Alfeeva

Russian Academy of Sciences

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I. A. Grivennikov

Russian Academy of Sciences

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O. V. Dolotov

Russian Academy of Sciences

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