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Featured researches published by Efstratios Nikolaivits.


Biochimica et Biophysica Acta | 2015

Structural and functional studies of a Fusarium oxysporum cutinase with polyethylene terephthalate modification potential.

Maria Dimarogona; Efstratios Nikolaivits; Maria Kanelli; Paul Christakopoulos; Mats Sandgren; Evangelos Topakas

BACKGROUND Cutinases are serine hydrolases that degrade cutin, a polyester of fatty acids that is the main component of plant cuticle. These biocatalysts have recently attracted increased biotechnological interest due to their potential to modify and degrade polyethylene terephthalate (PET), as well as other synthetic polymers. METHODS A cutinase from the mesophilic fungus Fusarium oxysporum, named FoCut5a, was expressed either in the cytoplasm or periplasm of Escherichia coli BL21. Its X-ray structure was determined to 1.9Å resolution using molecular replacement. The activity of the recombinant enzyme was tested on a variety of synthetic esters and polyester analogues. RESULTS The highest production of recombinant FoCut5a was achieved using periplasmic expression at 16°C. Its crystal structure is highly similar to previously determined Fusarium solani cutinase structure. However, a more detailed comparison of the surface properties and amino acid interactions revealed differences with potential impact on the biochemical properties of the two enzymes. FoCut5a showed maximum activity at 40°C and pH 8.0, while it was active on three p-nitrophenyl synthetic esters of aliphatic acids (C(2), C(4), C(12)), with the highest catalytic efficiency for the hydrolysis of the butyl ester. The recombinant cutinase was also found capable of hydrolyzing PET model substrates and synthetic polymers. CONCLUSIONS The present work is the first reported expression and crystal structure determination of a functional cutinase from the mesophilic fungus F. oxysporum with potential application in surface modification of PET synthetic polymers. GENERAL SIGNIFICANCE FoCut5a could be used as a biocatalyst in industrial applications for the environmentally-friendly treatment of synthetic polymers.


Frontiers in Microbiology | 2017

Marine-Derived Biocatalysts: Importance, Accessing, and Application in Aromatic Pollutant Bioremediation

Efstratios Nikolaivits; Maria Dimarogona; Nikolas Fokialakis; Evangelos Topakas

The aim of the present review is to highlight the potential use of marine biocatalysts (whole cells or enzymes) as an alternative bioprocess for the degradation of aromatic pollutants. Firstly, information about the characteristics of the still underexplored marine environment and the available scientific tools used to access novel marine-derived biocatalysts is provided. Marine-derived enzymes, such as dioxygenases and dehalogenases, and the involved catalytic mechanisms for the degradation of aromatic and halogenated compounds, are presented, with the purpose of underpinning their potential use in bioremediation. Emphasis is given on persistent organic pollutants (POPs) that are organic compounds with significant impact on health and environment due to their resistance in degradation. POPs bioaccumulate mainly in the fatty tissue of living organisms, therefore current efforts are mostly focused on the restriction of their use and production, since their removal is still unclear. A brief description of the guidelines and criteria that render a pollutant POP is given, as well as their potential biodegradation by marine microorganisms by surveying recent developments in this rather unexplored field.


Journal of Biotechnology | 2017

Enzymatic tailoring of oleuropein from Olea europaea leaves and product identification by HRMS/MS spectrometry

Efstratios Nikolaivits; A Termentzi; Alexios-Leandros Skaltsounis; Nikolas Fokialakis; Evangelos Topakas

Oleuropein, a bioactive compound found in all parts of olive tree, especially in leaves and branches, presents numerous health promoting properties that increase research and market interest the last few years. In addition, oleuropein degradation products, such as hydroxytyrosol, elenolic acid, and the aglycones also exhibit biological activities with different properties compared to the starting compound. Under this view, a commercial lipase preparation Lipolase 100L and a thermophilic β-glucosidase from Myceliophthora thermophila were used for the regioselective hydrolysis of oleuropein towards the production of the corresponding biologically active compounds. The enzymatic degradation products of oleuropein, such as hydroxytyrosol, elenolic acid and its glucoside, and oleuropein aglycones were identified by LC-HRMS/MS and NMR spectroscopy. The latter, was found as a mix of diastereomers of the monoaldehydic form of oleuropein aglycone, identified as (5S, 8R, 9S)-, (5S, 8S, 9S)- and (5S, 8R, 9R). The high substrate specificity exhibited by both lipase and β-glucosidase allows the successful tailoring of oleuropein towards the production of different biologically active compounds with significant potential in the cosmeceutical and food industry.


Process Biochemistry | 2015

Surface modification of poly(ethylene terephthalate) (PET) fibers by a cutinase from Fusarium oxysporum

Maria Kanelli; Sozon Vasilakos; Efstratios Nikolaivits; S. Ladas; Paul Christakopoulos; Evangelos Topakas


Journal of Molecular Catalysis B-enzymatic | 2016

Cutinase from Fusarium oxysporum catalyzes the acylation of tyrosol in an aqueous medium: Optimization and thermodynamic study of the reaction

Efstratios Nikolaivits; Giannis-Florjan Norra; Epaminondas Voutsas; Evangelos Topakas


Protein Expression and Purification | 2016

Microbial host selection and periplasmic folding in Escherichia coli affect the biochemical characteristics of a cutinase from Fusarium oxysporum

Efstratios Nikolaivits; Areti Kokkinou; Michael Karpusas; Evangelos Topakas


New Biotechnology | 2014

A cutinase from Fusarium oxysporum with potential for PET surface modification

Evangelos Topakas; Efstratios Nikolaivits; Maria Kanelli; Paul Christakopoulos


New Biotechnology | 2018

Biodegradation of 2,4,5-trichlorobiphenyl (PCB29) by marine-derived mesophotic fungi

Efstratios Nikolaivits; A. Agrafiotis; N. Fokialakis; Evangelos Topakas


Applied and Environmental Microbiology | 2018

Characterization and protein engineering of a novel versatile fungal polyphenol oxidase with chlorophenol bioremediation potential

Efstratios Nikolaivits; Maria Dimarogona; Ioanna Karagiannaki; Angelina Chalima; Ayelet Fishman; Evangelos Topakas


Journal of Agricultural and Food Chemistry | 2017

Immobilization of a Cutinase from Fusarium oxysporum and Application in Pineapple Flavor Synthesis

Efstratios Nikolaivits; Georgios Makris; Evangelos Topakas

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Evangelos Topakas

National Technical University of Athens

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Paul Christakopoulos

Luleå University of Technology

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Maria Kanelli

National Technical University of Athens

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Nikolas Fokialakis

National and Kapodistrian University of Athens

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Alexios-Leandros Skaltsounis

National and Kapodistrian University of Athens

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Angelina Chalima

National Technical University of Athens

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Areti Kokkinou

Agricultural University of Athens

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Epaminondas Voutsas

National Technical University of Athens

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