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Dive into the research topics where Eiki Yamashita is active.

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Featured researches published by Eiki Yamashita.


Journal of Molecular Biology | 1995

Effects of ethyleneglycol chain length of dodecyl polyethyleneglycol monoether on the crystallization of bovine heart cytochrome c oxidase

Kyoko Shinzawa-Itoh; Hidefumi Ueda; Shinya Yoshikawa; Hiroshi Aoyama; Eiki Yamashita; Tomitake Tsukihara

Tetragonal crystals that diffracted X-rays up to 5 A resolution were obtained from bovine heart cytochrome c oxidase isolated and solubilized with dodecyl octaethyleneglycol monoether, CH3(CH2)11O(CH2CH2O)8H. Comparison of observed structure factors between data sets each obtained from a different native crystal gave correlation coefficients of 0.92, 0.84 and 0.57 at 10 A, 7 A and 6 A resolution, respectively. The space group and the cell dimensions of the crystal are I4(1) or I4(3) and a = b = 253 A, c = 507 A, respectively. The perfection and stability of the tetragonal crystals are significantly higher than those of the hexagonal crystals of the protein stabilized with Brij-35, CH3(CH2)11O(CH2CH2O)23H (whose details are reported elsewhere). Examination of the effect of ethyleneglycol chain length on the crystallization revealed that only dodecyl polyethyleneglycol monoethers with eight and seven units were appropriate for producing this type of crystal, indicating an optimum size of the detergent for crystallization of the membrane protein.


The Japanese Biochemical Society/The Molecular Biology Society of Japan | 2017

Structural basis for the assembly of the Ragulator-RagGTPase complex

Masahiro Nakai; Masato Okada; Shigeyuki Nada; Akira Ogawa; Ayaka Kitamura; Tomokazu Nakai; Atsushi Nakagawa; Eiki Yamashita; Ryo Yonehara; Keiichi I. Nakayama; Hirokazu Nakatsumi


The Japanese Biochemical Society/The Molecular Biology Society of Japan | 2017

Structure of Ragulator and mechanisms for the Rag binding

Shigeyuki Nada; Ryo Yonehara; Masahiro Nakai; Ayaka Kitamura; Akira Ogawa; Eiki Yamashita; Atsushi Nakagawa; Masato Okada


生物物理 | 2014

1P112 アジ化物結合型チトクロム酸化酵素の高分解能X線結晶構造解析によるアジ化物結合様式の解析(03. 膜蛋白質,ポスター,第52回日本生物物理学会年会(2014年度))

Atsuhiro Shimada; Masahide Hikita; Hitomi Tadehara; Akima Yamamoto; Eiki Yamashita; Kyoko Shinzawa-Itoh; Tomoko Maeda; Tomitake Tsukihara; Shinya Yoshikawa


生物物理 | 2014

3P093 チトクロムcとチトクロム酸化酵素複合体のX線結晶構造解析(02. ヘム蛋白質,ポスター,第52回日本生物物理学会年会(2014年度))

Satoru Shimada; Kyoko Shinzawa-Itoh; Shimpei Aoe; Atsuhiro Shimada; Jumpei Baba; Syuhei Takemura; Eiki Yamashita; Tomitake Tsukihara; Shinya Yoshikawa


生物物理 | 2013

3P287 X線自由電子レーザーを利用した球状生体超分子複合体のコヒーレントX線イメージングへの取り組み(27.バイオイメージング,ポスター,日本生物物理学会年会第51回(2013年度))

Akifumi Higashiura; Marina Murakami; Kenji Iwasaki; Eiki Yamashita; Kazuki Takeda; Yuya Hanazono; Kiyofumi Takaba; Masahito Hibi; Yuriko Tomisaki; Kunio Miki; Atsushi Nakagawa


生物物理 | 2013

3P098 一酸化炭素・シアン化物結合混合原子価型ウシ心筋チトクロム酸化酵素の構造解析(02.ヘム蛋白質,ポスター,日本生物物理学会年会第51回(2013年度))

Kazumasa Muramoto; Masao Mochizuki; Maki Taniguchi; Naomine Yano; Tomoko Maeda; Kyoko Shinzawa-Itoh; Eiki Yamashita; Tomitake Tsukihara; Shinya Yoshikawa


生物物理 | 2013

3P095 シアン化物・アジ化物結合完全酸化型ウシ心筋チトクロム酸化酵素の構造解析(02.ヘム蛋白質,ポスター,日本生物物理学会年会第51回(2013年度))

Kazumasa Muramoto; Masao Mochizuki; Naomine Yano; Tomoko Maeda; Kyoko Shinzawa-Itoh; Eiki Yamashita; Tomitake Tsukihara; Shinya Yoshikawa


生物物理 | 2012

2PT157 水素原子レベルでの酸化還元に伴う構造変化同定を目的としたウシ心筋チトクロム酸化酵素のX線結晶構造解析(日本生物物理学会第50回年会(2012年度))

Naomine Yano; Kazumasa Muramoto; Kyoko Shinzawa-Itoh; Tomoko Maeda; Eiki Yamashita; Tomitake Tsukihara; Shinya Yoshikawa; Yoshitugu Shiro


生物物理 | 2011

1B1312 ウシ心筋チトクロム酸化酵素R型O型中間体のX線構造解析(膜蛋白質1,第49回日本生物物理学会年会)

Hidenori Fujisawa; Kazumasa Muramoto; Tomoko Maeda; Kyoko Shinzawa-Itoh; Eiki Yamashita; T. Tsukihara; Shinya Yoshikawa

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