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Dive into the research topics where Ekaterina R. Kotlova is active.

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Featured researches published by Ekaterina R. Kotlova.


Microbiology | 2011

The effect of different heat influences on composition of membrane lipids and cytosol carbohydrates in mycelial fungi

V. M. Tereshina; A. S. Memorskaya; Ekaterina R. Kotlova

Comparison of the changes in the composition of the membrane lipids and soluble cytosol carbohydrates caused by two types of heat influence (within the tolerance zone and heat shock-level) revealed fundamental differences in the stress response of fungal cells. In three fungal species, Aspergillus niger, Pleurotus ostreatus, and Cunninghamella japonica, increased levels of trehalose and phosphatidic acids were observed under heat shock, while heat influences within the tolerance zone had no such effect. Under heat shock, the ratio of saturated fatty acids did not increase in any of the major phospholipids of all the studied species. This is in contradiction with the existing hypothesis and confirms the previously suggested the hypothesis of membrane stabilization by heat-protecting compounds.


Microbiology | 2010

Membrane lipid and cytosol carbohydrate composition in Aspergillus niger under heat shock

V. M. Tereshina; A. S. Memorskay; Ekaterina R. Kotlova; E. P. Feofilov

A submerged Aspergillus niger culture exposed to heat shock (40–41°C) for 1, 3, and 6 h acquires resistance to a more severe, lethal heat shock (55°C, 20 min). A general trend characteristic of a heat shock occurring during the trophophase or idiophase (regardless of its duration) is an increase in the trehalose level in the cytosol carbohydrate fraction and in the content of sphingolipids and phosphatidic acid in the membrane lipid fraction. Contrary to generally accepted views, no increase in the content of unsaturated fatty acid in the main phospholipid fraction, sterol level, and share of “bilayer” phospholipids was detected. The results obtained are discussed in terms of the current hypotheses concerning membrane protection under heat shock and our own suggestion on this subject.


Microbiology | 2016

Heat shock response of thermophilic fungi: membrane lipids and soluble carbohydrates under elevated temperatures.

Elena A. Ianutsevich; Olga A. Danilova; Natalia V. Groza; Ekaterina R. Kotlova; V. M. Tereshina

The heat shock (HS) response is an adaptation of organisms to elevated temperature. It includes substantial changes in the composition of cellular membranes, proteins and soluble carbohydrates. To protect the cellular macromolecules, thermophilic organisms have evolved mechanisms of persistent thermotolerance. Many of those mechanisms are common for thermotolerance and the HS response. However, it remains unknown whether thermophilic species respond to HS by further elevating concentrations of protective components. We investigated the composition of the soluble cytosol carbohydrates and membrane lipids of the thermophilic fungi Rhizomucor tauricus and Myceliophthora thermophilaat optimum temperature conditions (41-43 °С), and under HS (51-53 °С). At optimum temperatures, the membrane lipid composition was characterized by a high proportion of phosphatidic acids (PA) (20-35 % of the total), which were the main components of the membrane lipids, together with phosphatidylcholines (PC), phosphatidylethanolamines (PE) and sterols (St). In response to HS, the proportion of PA and St increased, and the amount of PC and PE decreased. No decrease in the degree of fatty acid desaturation in the major phospholipids under HS was detected. The mycelium of all fungi at optimum temperatures contained high levels of trehalose (8-10 %, w/w; 60-95 % of the total carbohydrates), which is a hallmark of thermophilia. In contrast to mesophilic fungi, heat exposure decreased the trehalose level and the fungi did not acquire thermotolerance to lethal HS, indicating that trehalose plays a key role in this process. This pattern of changes appears to be conserved in the studied filamentous thermophilic fungi.


Phytochemistry | 2015

Diacylglyceryltrimethylhomoserine content and gene expression changes triggered by phosphate deprivation in the mycelium of the basidiomycete Flammulina velutipes

Svetlana V. Senik; Liliya G. Maloshenok; Ekaterina R. Kotlova; Alexey L. Shavarda; Konstantin V. Moiseenko; Sergey Bruskin; O. V. Koroleva; Nadezhda V. Psurtseva

Diacylglyceryltrimethylhomoserines (DGTS) are betaine-type lipids that are phosphate-free analogs of phosphatidylcholines (PC). DGTS are abundant in some bacteria, algae, primitive vascular plants and fungi. In this study, we report inorganic phosphate (Pi) deficiency-induced DGTS synthesis in the basidial fungus Flammulina velutipes (Curt.: Fr.) Sing. We present results of an expression analysis of the BTA1 gene that codes for betaine lipid synthase and two genes of PC biosynthesis (CHO2 and CPT1) during phosphate starvation of F. velutipes culture. We demonstrate that FvBTA1 gene has increased transcript abundance under phosphate starvation. Despite depletion in PC, both CHO2 and CPT1 were determined to have increased expression. We also describe the deduced amino acid sequence and genomic structure of the BTA1 gene in F. velutipes. Phylogenetic relationships between putative orthologs of BTA1 proteins of basidiomycete fungi are discussed.


Microbiology | 2009

Alterations in the composition of membrane glycero-and sphingolipids in the course of Flammulina velutipes surface culture development.

Ekaterina R. Kotlova; Senik Sv; T. Kücher; Alexey L. Shavarda; A.A. Kiyashko; Nadezhda V. Psurtseva; Natalia F. Sinyutina; Roman A. Zubarev

Qualitative and quantitative characteristics of the alterations in the lipid composition of the membrane of the basidial fungus Flammulina velutipes in the course of surface culture development were investigated. Modifications of the lipid composition were shown to be timed to specific ontogeny stages, such as changes in the growth rate of the colonies, the appearance of differentiated vegetative cells, and the formation of generative structures. A slowdown of growth correlated with an alteration in the ratio of major classes of phospholipids, namely, with a decrease of phosphatidylcholine relative content and an increase in phosphatidylethanolamines. The differentiation of vegetative cells of the mycelium proceeded along with modifications of molecular composition of glycoceramides. In the course of the first week of growth, the surface culture of F. velutipes produced monohexosylceramides with epoxidized methyl sphingadienine as a sphingoid base. Later on, along with culture growth and specialization of mycelium cells, molecular species with methyl sphingadienine, common for basidiomycetes, start to prevail among the fungal glycoceramides. The formation of fruit bodies is accompanied by enrichment of molecules of phospholipids, mainly, the phosphatidylcholines, with unsaturated fatty acids.


FEBS Journal | 2014

Sterol binding by methyl‐β‐cyclodextrin and nystatin – comparative analysis of biochemical and physiological consequences for plants

J. N. Valitova; Albina Sulkarnayeva; Ekaterina R. Kotlova; A. A. Ponomareva; Fakhima K. Mukhitova; L. I. Murtazina; I. S. Ryzhkina; Richard P. Beckett; Farida V. Minibayeva

The dependence of membrane function on its sterol component has been intensively studied with model lipids and isolated animal membranes, but to a much lesser extent with plant membranes. Depleting membrane sterols could be predicted to have a strong effect on membrane activity and have harmful physiological consequences. In this study, we characterized membrane lipid composition, membrane permeability for ions, some physiological parameters, such as H2O2 accumulation, formation of autophagosomal vacuoles, and expression of peroxidase and autophagic genes, and cell viability in the roots of wheat (Triticum aestivum L.) seedlings in the presence of two agents that specifically bind to endogenous sterols. The polyene antibiotic nystatin binds to endogenous sterols, forming so‐called ‘nystatin pores’ or ‘channels’ in the membrane, and methyl‐β‐cyclodextrin has the capacity to sequester sterols in its hydrophobic core. Unexpectedly, although application of both methyl‐β‐cyclodextrin and nystatin reduced the sterol content, their effects on membrane permeability, oxidative status and autophagosome formation in roots differed dramatically. For comparison, we also tested the effects of the antibiotic gramicidin S, which does not bind to sterols but forms nonspecific channels in the membrane. Gramicidin S considerably increased membrane permeability, caused oxidative stress, and reduced cell viability. Our results suggest that a decrease in the sterol content is, in itself, not sufficient to have deleterious effects on a cell. The disturbance of membrane integrity, rather than the decrease in the sterol content, is responsible for the toxicity of sterol‐binding compounds.


Phytochemistry | 2011

Effects of sterol-binding agent nystatin on wheat roots: the changes in membrane permeability, sterols and glycoceramides.

J. N. Valitova; Farida V. Minibayeva; Ekaterina R. Kotlova; Alexander V. Novikov; Alexey L. Shavarda; L. I. Murtazina; I. S. Ryzhkina

Plant sterols are important multifunctional lipids, which are involved in determining membrane properties. Biophysical characteristics of model lipid and isolated animal membranes with altered sterol component have been intensively studied. In plants however, the precise mechanisms of involvement of sterols in membrane functioning remain unclear. In present work the possible interactions between sterols and other membrane lipids in plant cells were studied. A useful experimental approach for elucidating the roles of sterols in membrane activity is to use agents that specifically bind with endogenous sterols, for example the antibiotic nystatin. Membrane characteristics and the composition of membrane lipids in the roots of wheat (Triticum aestivum L.) seedlings treated with nystatin were analyzed. The application of nystatin greatly increased the permeability of the plasma membrane for ions and SH-containing molecules and decreased the total sterol level mainly as a consequence of a reduction in the amount of β-sitosterol and campesterol. Dynamic light-scattering was used to confirm the in vitro formation of stable complexes between nystatin and β-sitosterol or cholesterol. Sterol depletion was accompanied by a significant rise in total glycoceramide (GlCer) content after 2h treatment with nystatin. Analysis of the GlCer composition using mass spectrometry with electrospray ionization demonstrated that nystatin induced changes in the ratio of molecular species of GlCer. Our results suggest that changes in the sphingolipid composition can contribute to the changes in plasma membrane functioning induced by sterol depletion.


Biochemistry | 2010

Binding of sterols affects membrane functioning and sphingolipid composition in wheat roots.

Yu. N. Valitova; Ekaterina R. Kotlova; A. V. Novikov; A. L. Shavarda; Konstantin A. Artemenko; Roman A. Zubarev; Farida V. Minibayeva

The present work was devoted to the exploration of the role of sterols in the functioning of membranes in root cells. Membrane characteristics and composition of the membrane lipids in the roots of wheat (Triticum aestivum L.) seedlings treated with exogenous cholesterol and antibiotic nystatin, which specifically binds with endogenous sterols, were analyzed. Cholesterol caused a fall of membrane potential, acidification of the incubation medium, decrease in potassium leakage of roots, and increase in the level of exogenous superoxide radical. Similarly to cholesterol, the application of nystatin also induced the depolarization of the plasma membrane, but in contrast with cholesterol it was accompanied by alkalinization of the incubation medium and decrease in the level of exogenous superoxide radical. Analysis of membrane lipids showed that following nystatin treatment the total sterol content in roots did not change, while the level of complex sphingolipids represented mainly by glycoceramides became higher. Using mass spectrometry with electrospray ionization (+ESI-MS) for the analysis of the glycoceramide composition, we showed that nystatin induced changes in the ratios of molecular species of glycoceramides. It was suggested that the modification of the sterol component of plasma membrane could influence membrane functioning by changing the sphingolipid composition of lipid rafts.


Microbiology | 2013

Lipid metabolism in Aspergillus niger under conditions of heat shock

V. M. Tereshina; A. S. Memorskaya; Ekaterina R. Kotlova

The processes of lipid synthesis and decomposition in Aspergillus niger under conditions of heat shock (HS) were studied in a pulse-chase experiment with 14C-labeled sodium acetate. HS (60 min) resulted in the synthesis of phospholipids and sphingolipids intensified compared to the control, as was evident from incorporation of the labeled substrate. The same pattern was observed for neutral lipids, especially for triacylglycerides, while incorporation of the label into sterols remained almost the same. Further cultivation for 3 h in the medium without the labeled substrate resulted in a significant decrease of the label content in the membrane lipids of both the control and the experiment, although under HS conditions this decrease was much more pronounced, especially for phosphatidylcholines and phosphatidylethanolamines. A threefold increase of the label content in phosphatidic acids was observed only under HS conditions. These results indicate more intense metabolism of the membrane lipids under heat shock and suggest the degradation of the major cell phospholipids as the factor responsible for the increased level of phosphatidic acids in A. niger mycelium.


Extremophiles | 2017

Membrane lipids and soluble sugars dynamics of the alkaliphilic fungus Sodiomyces tronii in response to ambient pH

S. A. Bondarenko; Elena A. Ianutsevich; Olga A. Danilova; Alexey A. Grum-Grzhimaylo; Ekaterina R. Kotlova; Olga V. Kamzolkina; E. N. Bilanenko; V. M. Tereshina

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Alexey L. Shavarda

Russian Academy of Sciences

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V. M. Tereshina

Russian Academy of Sciences

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Natalia F. Sinyutina

Saint Petersburg State University

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Senik Sv

Saint Petersburg State University

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A. S. Memorskaya

Russian Academy of Sciences

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A.A. Kiyashko

Russian Academy of Sciences

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