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Dive into the research topics where Elena Y. Varfolomeeva is active.

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Featured researches published by Elena Y. Varfolomeeva.


Cell Communication and Signaling | 2013

Exosomes are natural carriers of exogenous siRNA to human cells in vitro

T. A. Shtam; R. A. Kovalev; Elena Y. Varfolomeeva; Evgeny M. Makarov; Yury V Kil; Filatov Mv

BackgroundExosomes are nano-sized vesicles of endocytic origin that are involved in cell-to-cell communication including shuttle RNA, mainly mRNA and microRNA. As exosomes naturally carry RNA between cells, these particles might be useful in gene cancer therapy to deliver therapeutic short interfering RNA (siRNA) to the target cells. Despite the promise of RNA interference (RNAi) for use in therapy, several technical obstacles must be overcome. Exogenous siRNA is prone to degradation, has a limited ability to cross cell membranes and may induce an immune response. Naturally occurring RNA carriers, such as exosomes, might provide an untapped source of effective delivery strategies.ResultsThis study demonstrates that exosomes can deliver siRNA to recipient cells in vitro. The different strategies were used to introduce siRNAs into human exosomes of various origins. The delivery of fluorescently labeled siRNA via exosomes to cells was confirmed using confocal microscopy and flow cytometry. Two different siRNAs against RAD51 and RAD52 were used to transfect into the exosomes for therapeutic delivery into target cells. The exosome-delivered siRNAs were effective at causing post-transcriptional gene silencing in recipient cells. Moreover, the exosome-delivered siRNA against RAD51 was functional and caused the massive reproductive cell death of recipient cancer cells.ConclusionsThe results strongly suggest that exosomes effectively delivered the siRNA into the target cells. The therapeutic potential of exosome-mediated siRNA delivery was demonstrated in vitro by the strong knockdown of RAD51, a prospective therapeutic target for cancer cells. The results give an additional evidence of the ability to use human exosomes as vectors in cancer therapy, including RNAi-based gene therapy.


Mutation Research | 1995

Active dissociation of Hoechst 33342 from DNA in living mammalian cells.

Filatov Mv; Elena Y. Varfolomeeva

The fluorescent dye Hoechst 33342, which binds tightly to DNA in the minor groove, can be effectively extracted from the DNA in vivo due to an energy-dependent process. It is the dissociation of the dye from DNA rather than its removal from a cell that has a critical role in this process. The dissociation can be suppressed by the topoisomerase-2 inhibitors novobiocin, ellipticine and etoposide. Breaks in the DNA also inhibit the process. The dissociation of the dye requires that DNA remain intact along a region of at least several thousand base pairs. It is proposed that DNA in mammalian cells is a dynamic, conformationally nonstable system and that topologically closed loops consisting of several thousand base pairs constantly appear and disappear in chromatin.


Free Radical Research | 2016

Ceruloplasmin decreases respiratory burst reaction during pregnancy

Elena Y. Varfolomeeva; Semenova Ev; A. V. Sokolov; Kirill D. Aplin; Kseniya E. Timofeeva; V. B. Vasilyev; Filatov Mv

Abstract Testing of pregnant women reveals weakening of neutrophil-mediated effector functions, such as reactive oxygen species generation. This study provides data confirming the phenomenon, gained through application of the flow cytometry technique. Key factors influencing neutrophil functional activity in blood plasma of pregnant women have not been detected so far. At the same time, concentration of ceruloplasmin – a copper-containing glycoprotein – is known to increase in blood significantly during pregnancy. We observed the negative correlation between ceruloplasmin concentration in blood plasma of pregnant women and the intensity of respiratory burst of neutrophils. Fractionation of plasma using gel-filtration revealed that ceruloplasmin-containing fraction demonstrated suppression of the respiratory burst reaction. Partial elimination of ceruloplasmin from the blood of pregnant women, performed with the help of specific antibodies and followed by immunoprecipitation, leads to an increased respiratory burst reaction. On the contrary, addition of ceruloplasmin to blood samples of healthy donors noticeably decreases the respiratory burst reaction. The results presented prove that change in ceruloplasmin level in plasma is necessary and sufficient for modulating the ability of neutrophils to produce reactive oxygen species during pregnancy.


PLOS ONE | 2017

The rare nonsense mutation in p53 triggers alternative splicing to produce a protein capable of inducing apoptosis.

Evgeny M. Makarov; T. A. Shtam; R. A. Kovalev; R. A. Pantina; Elena Y. Varfolomeeva; Filatov Mv

P53 protein is more frequently mutated in human tumours compared with the other proteins. While the majority of the p53 mutations, especially within its DNA-binding domain, lead to the loss of the wild-type function, there are accumulating data demonstrating that the p53 mutants gain tumour promoting activities; the latter triggers a revitalised interest in functional analysis of the p53 mutants. A systematic screening for p53 mutations in surgical materials from patients with glioma revealed a 378C>G mutation that creates a stop codon at the position of amino acid residue 126. The mutation eliminates the recognition site for the restriction endonuclease Sca I that allowed us to carry out RFLP analysis of DNA extracted from the clinical samples and suggests that this mutation is more frequent than is documented in the p53 databases. Both the ECV-304 and EJ cell lines, that probably originate from the bladder carcinoma T24 cell line, were confirmed to contain the homozygous 378C>G mutation but were shown to produce the p53 protein of expected full-length size detected by Western blotting. We provide evidence that the 378C>G mutation generates an alternative 3’ splice site (ss) which is more often used instead of the authentic upstream 3’ ss, driving the production of mRNA encoding the protein with the single amino acid deletion (p53ΔY126). Using endogenous expression, we demonstrated that the p53ΔY126 protein is nearly as active as the wild type protein in inducing the p21/Waf1 expression and apoptosis.


Biochemistry and Cell Biology | 2018

Capacity of ceruloplasmin to scavenge products of the respiratory burst of neutrophils is not altered by the products of reactions catalyzed by myeloperoxidase

A. V. Sokolov; Valeria A. Kostevich; Elena Y. Varfolomeeva; D. V. Grigorieva; I. V. Gorudko; Stanislav O. Kozlov; Igor Kudryavtsev; Elena V. Mikhalchik; Filatov Mv; S. N. Cherenkevich; O. M. Panasenko; Juergen Arnhold; V. B. Vasilyev

CP is a copper-containing ferroxidase of blood plasma, which acts as an acute phase reactant during inflammation. The effect of oxidative modification of CP induced by oxidants produced by MPO, such as HOCl, HOBr, and HOSCN, on its spectral, enzymatic, and anti-inflammatory properties was studied. We monitored the chemiluminescence of lucigenin and luminol along with fluorescence of hydroethidine and scopoletin to assay the inhibition by CP of the neutrophilic respiratory burst induced by PMA or fMLP. Superoxide dismutase activity of CP and its capacity to reduce the production of oxidants in respiratory burst of neutrophils remained virtually unchanged upon modifications caused by HOCl, HOBr, and HOSCN. Meanwhile, the absorption of type I copper ions at 610 nm became reduced, along with a drop in the ferroxidase and amino oxidase activities of CP. Likewise, its inhibitory effect on the halogenating activity of MPO was diminished. Sera of either healthy donors or patients with Wilson disease were co-incubated with neutrophils from healthy volunteers. In these experiments, we observed an inverse relationship between the content of CP in sera and the rate of H2O2 production by activated neutrophils. In conclusion, CP is likely to play a role of an anti-inflammatory factor tempering the neutrophil respiratory burst in the bloodstream despite the MPO-mediated oxidative modifications.


Electrophoresis | 1999

Active dissociation of the fluorescent dye Hoechst 33342 from DNA in a living cell: Who could do it?

Stanislav N. Naryzhny; Vera V. Levina; Elena Y. Varfolomeeva; Eugeny A. Drobchenko; Filatov Mv

It is assumed that DNA in mammalian cells is a dynamic conformationally unstable system. This instability provides the cell with a mechanism for dissociating a large number of substances that bind tightly but not covalently to DNA. Among these is the fluorescent dye Hoechst 33342, which binds to DNA in the minor groove. We have selected cell lines with a high capability for active dissociation of Hoechst 33342. Comparative protein analysis of these lines by means of two‐dimensional (2‐D) electrophoresis was performed. Cell and nuclear proteins were analyzed from these and normal strains. A few proteins with significantly changed quantities have been found. The preliminary search of the 2‐D database allowed us to identity some known and unknown cellular proteins that could participate in active dissociation of the dye from DNA.


Biochemical and Molecular Medicine | 1995

Flow Cytofluorometric Detection of Inflammatory Processes by Measuring Respiratory Burst Reaction of Peripheral Blood Neutrophils

Filatov Mv; Elena Y. Varfolomeeva; E.I. Ivanov


Hybridoma | 1999

Combined surgical and immunotherapeutic treatment of patients with fourth stage colon cancer.

Victor A. Tarasov; Filatov Mv; Tatiana V. Kisliakova; Noskov Fridrih S; Andrei V. Koloskov; Vladimir V. Stavrovietski; Sergri B. Onikienko; Vladimir Z. Kletchikov; Igor V. Lvov; Elena Y. Varfolomeeva; Oleg P. Blizniukov; Vera V. Levina; Michael V. Kiselevski


From Genome to Proteome: Advances in the Practice and Application of Proteomics | 2007

Chapter 59. Active dissociation of the fluorescent dye Hoechst 33342 from DNA in a living cell: Who could do it?

Stanislav N. Naryzhny; Vera V. Levina; Elena Y. Varfolomeeva; Eugeny A. Drobchenko; Filatov Mv


Atla-alternatives To Laboratory Animals | 2000

A new mechanism of Mammalian cell resistance to the toxic effects of DNA binding agents.

Levina; Elena Y. Varfolomeeva; Sukhareva E; Shabalina E; Eugeny A. Drobchenko; Filatov Mv

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Filatov Mv

Petersburg Nuclear Physics Institute

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Vera V. Levina

Petersburg Nuclear Physics Institute

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Eugeny A. Drobchenko

Petersburg Nuclear Physics Institute

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A. V. Sokolov

Saint Petersburg State University

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R. A. Kovalev

Petersburg Nuclear Physics Institute

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Stanislav N. Naryzhny

Petersburg Nuclear Physics Institute

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T. A. Shtam

Petersburg Nuclear Physics Institute

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V. B. Vasilyev

Saint Petersburg State University

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