Elisa Jimenez-Izal

On the directionality of halogen bonding

The origin of the high directionality of halogen bonding was investigated quantum chemically by a detailed comparison of typical adducts in two different orientations: linear (most stable) and perpendicular. Energy decomposition analyses revealed that the synergy between charge-transfer interactions and Pauli repulsion are the driving forces for the directionality, while electrostatic contributions are more favourable in the less-stable, perpendicular orientation.

Unexpected trends in halogen-bond based noncovalent adducts.

Unexpected trends in the strengths of halogen-bond based adducts of CY(3)I (Y = F, Cl, Br, I) with two typical Lewis bases (chloride and trimethylamine) show that the halogen-bond donor strength (Lewis acidity) of a compound R-X is not necessarily increased with higher electronegativity of the (carbon-based) group R.

Prediction of Two-Dimensional Phase of Boron with Anisotropic Electric Conductivity

Two-dimensional (2D) phases of boron are rare and unique. Here we report a new 2D all-boron phase (named the π phase) that can be grown on a W(110) surface. The π phase, composed of four-membered rings and six-membered rings filled with an additional B atom, is predicted to be the most stable on this support. It is characterized by an outstanding stability upon exfoliation off of the W surface, and unusual electronic properties. The chemical bonding analysis reveals the metallic nature of this material, which can be attributed to the multicentered π-bonds. Importantly, the calculated conductivity tensor is anisotropic, showing larger conductivity in the direction of the sheet that is in-line with the conjugated π-bonds, and diminished in the direction where the π-subsystems are connected by single σ-bonds. The π-phase can be viewed as an ultrastable web of aligned conducting boron wires, possibly of interest to applications in electronic devices.

Self-assembling endohedrally doped CdS nanoclusters: new porous solid phases of CdS.

Hollow CdS nanoclusters were predicted to trap alkali metals and halogen atoms inside their cavity. Furthermore, electron affinities (EA) of endohedrally halogen doped clusters and ionization potentials (IE) of endohedrally alkali doped clusters were predicted to be very similar. This makes them suitable to build cluster-assembled materials, in the same vein as do related ZnO, ZnS and MgO nanoclusters, which yield porous solid materials. With this aim in mind, we have focused on the assembly of bare Cd(i)S(i) and endohedral K@Cd(i)S(i)-X@Cd(i)S(i) (i = 12, 16, X = Cl, Br) clusters in order to obtain solids with tailored semiconducting and structural properties. Since these hollow nanoclusters possess square and hexagonal faces, three different orientations have to be considered, namely, edge-to-edge (E-E), square-to-square (S-S) and hexagon-to-hexagon (H-H). These three orientations lead to distinct zeolite-like nanoporous bulk CdS solid phases denoted as SOD, LTA and FAU. These solids are low-density crystalline nanoporous materials that might be useful in a wide range of applications ranging from molecular sieves for heterogeneous catalysis to gas storage templates.

Doped aluminum cluster anions: size matters.

The global minima of the cluster anions with the generic chemical formula (XAl₁₂)²⁻, where X = Be, Mg, Ca, Sr, Ba, and Zn, are determined by an extensive search of their potential energy surfaces using the Gradient Embedded Genetic Algorithm (GEGA). All the characterized global minima have an icosahedral-like structure, resembling that of the Al₁₃⁻ cluster. These cages comprise closed-shell electronic configurations with 40 electrons, therefore, in accordance to the jellium model, they are predicted to be highly stable and amenable to experimental detection. The two preferred sites for the dopant species, at the center and at surface of the icosahedral cage, are stabilized depending on the atomic radius of X. Thus, while the small dopants (X = Be, Zn) sit preferably at the center of the cage, the preferred site for X = Mg, Ca, Sr, and Ba is at the surface. Since these dianions are not stable towards electron detachment, one Li cation is added in order to yield stable systems. Our computations show that in the global minimum form of Li(XAl₁₂)⁻, the lithium cation, ionically bonded to the Al atoms, does not change the structure of the (XAl12)²⁻ core.

Computational Design of Clusters for Catalysis

When small clusters are studied in chemical physics or physical chemistry, one perhaps thinks of the fundamental aspects of cluster electronic structure, or precision spectroscopy in ultracold molecular beams. However, small clusters are also of interest in catalysis, where the cold ground state or an isolated cluster may not even be the right starting point. Instead, the big question is: What happens to cluster-based catalysts under real conditions of catalysis, such as high temperature and coverage with reagents? Myriads of metastable cluster states become accessible, the entire system is dynamic, and catalysis may be driven by rare sites present only under those conditions. Activity, selectivity, and stability are highly dependent on size, composition, shape, support, and environment. To probe and master cluster catalysis, sophisticated tools are being developed for precision synthesis, operando measurements, and multiscale modeling. This review intends to tell the messy story of clusters in catalysis.

CdS nanoclusters doped with divalent atoms.

AbstractZnS and CdS small nanoclusters have been predicted to trap alkali metals and halogen atoms. However would this kind of nanocompounds be able to encapsulate dianions and dications? This would be very interesting from an experimental point of view, since it would allow the isolation of such divalent ions. Moreover, the resulting endohedral complexes would serve as building blocks for new cluster-assembled materials, with enhanced stability arising from the electrostatic interaction between the incarcerated ions. In this work we have studied the structure and stability of (X@(CdS) i) ±2 with X = Be, Mg, Ca, O, S, Se and i=9, 12, 15, 16 on the basis of Density Functional Theory and Quantum Molecular Dynamics simulations. Most of the nanoclusters are found to trap both chalcogen and alkaline earth atoms. Furthermore, the chalcogen doped clusters are calculated to be both thermodynamically and thermally stable. However, only a few of alkaline earth metal doped structures are predicted to be thermally stable. Therefore, the charge of the dopant atom appears to be crucial in the endohedral doping. Additionally, the absorption spectra of the title compounds have been simulated by means of Time Dependent Density Functional Theory (TDDFT) calculations. The calculated optical features show a blueshift with respect to the bulk CdS wurtzite. Furthermore, doping modifies notably the optical spectra of nanoclusters, as the absorption spectra shift to lower energies upon encapsulation. FigureThe structure and stability of endohedrally doped (X@(CdS)i)±2 with X= Be, Mg, Ca, O, S, Se and i= 9, 12, 15, 16 have been theoretically studied. The calculated optical features show a blueshift with respect to the bulk CdS wurtzite.

Building Structures Atom by Atom via Electron Beam Manipulation

Building materials from the atom up is the pinnacle of materials fabrication. Until recently the only platform that offered single-atom manipulation was scanning tunneling microscopy. Here controlled manipulation and assembly of a few atom structures are demonstrated by bringing together single atoms using a scanning transmission electron microscope. An atomically focused electron beam is used to introduce Si substitutional defects and defect clusters in graphene with spatial control of a few nanometers and enable controlled motion of Si atoms. The Si substitutional defects are then further manipulated to form dimers, trimers, and more complex structures. The dynamics of a beam-induced atomic-scale chemical process is captured in a time-series of images at atomic resolution. These studies suggest that control of the e-beam-induced local processes offers the next step toward atom-by-atom nanofabrication, providing an enabling tool for the study of atomic-scale chemistry in 2D materials and fabrication of predefined structures and defects with atomic specificity.Author(s): Dyck, O; Kim, S; Jimenez-Izal, E; Alexandrova, AN; Kalinin, SV; Jesse, S | Abstract: We demonstrate assembly of di-, tri- and tetrameric Si clusters on the graphene surface using sub-atomically focused electron beam of a scanning transmission electron microscope. Here, an electron beam is used to introduce Si substitutional defects and defect clusters in graphene with spatial control of a few nanometers, and enable controlled motion of Si atoms. The Si substitutional defects are then further manipulated to form dimers, trimers and more complex structures. The dynamics of a beam induced atomic scale chemical process is captured in a time-series of images at atomic resolution. These studies suggest that control of the e-beam induced local processes offers the next step toward atom-by-atom nanofabrication and provides an enabling tool for study of atomic scale chemistry in 2D materials.