F. R. Bidinger

Genomic regions associated with grain yield and aspects of post-flowering drought tolerance in pearl millet across stress environments and tester background

A pearl millet mapping population from a cross between ICMB841 and 863B was studied for DNA polymorphism to construct a genetic linkage map, and to map genomic regions associated with grain and stover yield, and aspects of drought tolerance. To identify genomic regions associated with these traits, mapping population testcrosses of 79 F3 progenies were evaluated under post-flowering drought stress conditions over 2 years and in the background of two elite testers. A significant genotype × drought stress treatment interaction was evident in the expression of grain and stover yield in drought environments and in the background of testers over the 2 years. As a result of this, genomic regions associated with grain and stover yield and the aspects of drought tolerance were also affected: some regions were more affected by the changes in the environments (i.e. severity and duration of drought stress) while others were commonly identified across the drought stress environments and tester background used. In most instances, both harvest index and panicle harvest index co-mapped with grain yield suggesting that increased drought tolerance and yield of pearl millet that mapped to these regions was achieved by increased partitioning of dry matter from stover to the grains. Drought stress treatments, years and testers interactions on genomic regions associated with grain and stover yield of pearl millet are discussed, particularly, in reference to genetic improvement of drought tolerance of this crop using marker-assisted selection.

Crop physiology and breeding for drought tolerance: research and development

Abstract This paper presents an example of the research and development function of a physiology group within a cereal breeding program: an evaluation of the possibility of incorporating selection for tolerance to drought stress during the flowering and grain-filling period in pearl millet. It includes a review of the problem and possible solutions, and a report of two experiments conducted to identify phenotypic characteristics associated with yield differences under stress which could be used as selection criteria in breeding for tolerance. Differences among genotypes in yield under stress during flowering and grain-filling were partitioned into differences in yield potential, drought escape, and drought tolerance; the drought response accounted for more than 40% of the observed yield differences. Phenotypic traits related to yield under stress were divided into those reflecting drought escape and those reflecting drought tolerance. Drought tolerance was found to be primarily expressed in traits relating to the ability to maintain grain numbers under stress (grain number per panicle and per unit area, and grain yield per panicle). Drought escape, in contrast, was expressed in terms of greater grain biomass and higher harvest index. However, the field data also indicated that considerable progress in yield under stress should be possible by selection for earlier flowering and improved yield potential alone.

Mapping and characterisation of QTL × E interactions for traits determining grain and stover yield in pearl millet

Abstract.A mapping population of 104 F3 lines of pearl millet, derived from a cross between two inbred lines H 77/833-2 × PRLT 2/89-33, was evaluated, as testcrosses on a common tester, for traits determining grain and stover yield in seven different field trials, distributed over 3 years and two seasons. The total genetic variation was partitioned into effects due to season (S), genotype (G), genotype × season interaction (G × S), and genotype × environment-within-season interaction [G × E(S)]. QTLs were determined for traits for their G, G × S, and G × E(S) effects, to assess the magnitude and the nature (cross over/non-crossover) of environmental interaction effects on individual QTLs. QTLs for some traits were associated with G effects only, while others were associated with the effects of both G and G × S and/or G, G × S and G × E(S) effects. The major G × S QTLs detected were for flowering time (on LG 4 and LG 6), and mapped to the same intervals as G × S QTLs for several other traits (including stover yield, harvest index, biomass yield and panicle number m–2). All three QTLs detected for grain yield were unaffected by G × S interaction however. All three QTLs for stover yield (mapping on LG 2, LG 4 and LG 6) and one of the three QTLs for grain yield (mapping on LG 4) were also free of QTL × E(S) interactions. The grain yield QTLs that were affected by QTL × E(S) interactions (mapping on LG 2 and LG 6), appeared to be linked to parallel QTL × E(S) interactions of the QTLs for panicle number m–2 on (LG 2) and of QTLs for both panicle number m–2 and harvest index (LG 6). In general, QTL × E(S) interactions were more frequently observed for component traits of grain and stover yield, than for grain or stover yield per se.

Effect of timing of water deficit on pearl millet (Pennisetum americanum)

The susceptibility of pearl millet to soil water deficits at different times of growth was determined in field experiments conducted over 2 years. Grain yields and yield components were expressed as ratios of stressed to non-stressed treatments. Where water deficit was imposed earlier in crop growth and then relieved, the time of termination of stress from flowering determined the extent of grain yield loss. Water stress relieved at anthesis or early grain filling had little adverse effect on the grain yield because additional tillers produced panicles. This response by tillers was less evident and grain yields were more severely reduced when water stress was not relieved until after flowering. When stress was imposed late in crop growth and not relieved, the time of initiation of stress was directly related to the extent of loss in grain yield. Thus susceptibility to mid-season drought stress was related to the time stress was terminated and in late-season drought to the time stress was initiated.

A yield architecture framework to explain adaptation of pearl millet to environmental stress

Functional knowledge of the physiological basis of crop adaptation to stress is a prerequisite for exploiting specific adaptation to stress environments in breeding programs. This paper presents an analysis of yield components for pearl millet, to explain the specific adaptation of local landraces to stress environments in Rajasthan, India. Six genotypes, ranging from high-tillering traditional landraces to low-tillering open-pollinated modern cultivars, were grown in 20 experiments, covering a range of nonstress and drought stress patterns. In each experiment, yield components (particle number, grain number, 100 grain mass) were measured separately for main shoots, basal tillers, and nodal tillers. Under optimum conditions, landraces had a significantly lower grain yield than the cultivars, but no significant differences were observed at yield levels around 1 ton ha(-1). This genotype x environment interaction for grain yield was due to a difference in yield strategy, where landraces aimed at minimising the risk of a crop failure under stress conditions, and modem cultivars aimed at maximising yield potential under optimum conditions. A key aspect of the adaptation of landraces was the small size of the main shoot panicle, as it minimised (1) the loss of productive tillers during stem elongation; (2) the delay in anthesis if mid-season drought occurs; and (3) the reduction in panicle productivity of the basal tillers under stress. In addition, a low investment in structural panicle weight, relative to vegetative crop growth rate, promoted the production of nodal tillers, providing a mechanism to compensate for reduced basal tiller productivity if stress occurred around anthesis. A low maximum 100 grain mass also ensured individual grain mass was little affected by environmental conditions. The strategy of the high-tillering landraces carries a yield penalty under optimum conditions, but is expected to minimise the risk of a crop failure, particularly if mid-season drought stress occurs. The yield architecture of low-tillering varieties, by contrast, will be suited to end-of-season drought stress, provided anthesis is early. Application of the above adaptation mechanisms into a breeding program could enable the identification of plant types that match the prevalent stress patterns in the target environments

Evaluation of landrace topcross hybrids of pearl millet for arid zone environments

Pearl millet (Pennisetum glaucum (L.) R. Br.) cultivars for marginal, arid environments need to combine the adaptation to stress conditions of indigenous landraces with an improved yield potential and disease resistance, to allow them to both perform well in farmers fields and to meet the requirements for cultivar release. This paper evaluates landrace-based topcross hybrids (adapted landraces crossed on high-yielding male-sterile lines), as a quick and efficient way of achieving this objective. Topcross hybrids showed a consistent increase in biomass production across all test environments, including the harsh arid zone environments. Depending upon the plant type of the male-sterile used to make the hybrid, this was expressed as increased grain yield only, or increased grain and fodder yields. The downy mildew (Sclerospora graminicola) reaction of the topcross hybrids was determined by the reaction of the male-sterile line used, with the resistant male-sterile producing resistant topcross hybrids and vice-versa. Topcrossing adapted landraces on high-yielding male-sterile lines thus provides an opportunity to improve disease resistance and grain and/or fodder yields, with no apparent loss of adaptation to the marginal environments in which the landraces have evolved.

The growth and development of pearl millet as affected by plant population

Abstract Pearl millet (Pennisetum americanum (L.) Leeke) was grown at ICRISAT, Hyderabad, India at 20 densities ranging from 50 000 to 400 000 plants ha−1 using a Nelder fan design. Studies were made on the effect of population on the distribution of plant dry weight, leaf area, grain yield and yield components throughout the season. The first effect of increasing population was evident at panicle initiation (

Heterosis in landrace-based topcross hybrids of pearl millet across arid environments

This study quantified the magnitude of heterosis in pearl millet (Pennisetum glaucum) topcross hybrids produced by crossing 16 diverse landraces and three high yielding open-pollinating varieties on two homozygous male-sterile lines. Hybrids and pollinators were grown in 12 year ×;location combinations in India that were grouped into three zones. Genetic components of variance quantifying the differences among these hybrids were estimated. The hybrids showed a conspicuous heterosis for grain yield, earliness and biomass yield but not for straw yield. The level and direction of heterosis for time to flowering depended strongly on the earliness of the male-sterile line. In the terminal drought stress zone hybrids made on the early maturing male-sterile line 843A had the highest level of heterosis for grain yield (88%). This was partly due to escape from terminal stress. In the other two zones the heterosis for grain yield was on average 30%. Heterosis for biomass yield and biomass yield per day was on average also positive in all three zones. For all traits, except time to flowering and biomass yield per day, pollinator effects were the only significant source of variation. Differences between hybrids were mostly caused by additive genetic effects. Significant amount of heterosis observed in landrace-based topcross hybrids for grain yield and other productivity-related traits suggested that substantial improvement in pearl millet productivity in and environments can be obtained by topcrossing locally adapted landraces on suitable male-sterile lines.

II.1.5 Phenotyping pearl millet for adaptation to drought

Pearl millet is highly resilient to some of the driest areas of the world, like the Sahel area or fringes of the Thar desert in India. Despite this, there is a wealth of variation in pearl millet genotypes for their adaptation to drought and the object of this paper was to review some related work in the past 25 years to harness these capacities toward the breeding of better adapted cultivars. Work on short duration cultivars has been a major effort. Pearl millet has also some development plasticity thanks to a high tillering ability, which allows compensating for possible drought-related failure of the main culm under intermittent drought. The development of molecular tools for breeding has made great progress in the last 10–15 years and markers, maps, EST libraries, BACs are now available and a number of quantitative trait loci (QTLs) for different traits, including drought, have been identified. Most of the work on drought has focused on the drought tolerance index (DTI), an index that reflect the genetic differences in drought adaptation that are independent of flowering time and yield potential. The DTI is closely associated to the panicle harvest index (PNHI), a trait that relates to a better grain setting and grain filling capacity. Initial work on the DTI involved empirical breeding and selection based on PNHI. A QTL for PNHI has then been identified and introgressed by marker-assisted backcrossing. More recently, a thorough dissection of that QTL has been carried out and shows that high PNHI is related to the constitutive ability of tolerant lines to save water (lower leaf conductance and sensitivity of transpiration to high vapor pressure deficit) at a vegetative stage and use it for the grain filling period. However, there is no contribution of root traits in this QTL. Current work is taking place to map these water saving traits, understand their genetic interactions, and design ideotypes having specific genetic make-up toward adaptation to specific rainfall environments.

Improving the production and utilization of sorghum and pearl millet as livestock feed: methodological problems and possible solutions

Abstract The overall objective of this work was the identification of simple, yet accurate, assessments of fodder quality of sorghum and pearl millet stover in crop improvement programs. Stover from 12 genotypes of sorghum and six genotypes of pearl millet grown under high and low fertilizer application was investigated for nitrogen, cell wall constituents, sugar, plant height, stem diameter, leaf number per plant and extent and rate of in vitro gas production of whole stover and of stover cell walls. Organic matter digestibility, organic matter intake, digestible organic matter intake (DOMI) and cell wall digestibility were measured in bulls. Significant genotypic variation was found for chemical, morphological and in vitro fermentation characteristics of stover but their relationship with digestibility and intake measurements was generally poor. While no single chemical, morphological or in vitro measurement described stover quality adequately, some combinations of these measurements resulted in good overall relationships with stover quality measurements. Across sorghum and pearl millet, 71% (P