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Dive into the research topics where Fabien Lombard is active.

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Featured researches published by Fabien Lombard.


Proceedings of the National Academy of Sciences of the United States of America | 2011

Grazer cues induce stealth behavior in marine dinoflagellates

Erik Selander; Hans Henrik Jakobsen; Fabien Lombard; Thomas Kiørboe

Chain formation is common among phytoplankton organisms but the underlying reasons and consequences are poorly understood. Here we show that chain formation is strongly impaired by waterborne cues from copepod grazers in the dinoflagellate Alexandrium tamarense. Chains of Alexandrium cells exposed to copepod cues responded by splitting into single cells or shorter chains. Motion analysis revealed significantly lower swimming velocities for single cells compared with chains, with two- to fivefold higher simulated predator encounter rates for two- and four-cell chains, respectively. In addition, the few remaining two-cell chains in grazed treatments were swimming at approximately half the speed of two-cell chains in treatments without grazers, which reduced encounter rates with grazers to values similar to that of single cells. Chain length plasticity and swimming behavior constitute unique mechanisms to reduce encounters with grazers. We argue that dinoflagellates can regulate the balance between motility and predator avoidance by adjusting chain length. The high predator encounter rate for motile chains may have contributed to the low prevalence of chain formation in motile phytoplankton compared with in nonmotile phytoplankton where chain formation is more common.


PLOS ONE | 2013

Effect of Type and Concentration of Ballasting Particles on Sinking Rate of Marine Snow Produced by the Appendicularian Oikopleura dioica

Fabien Lombard; Lionel Guidi; Thomas Kiørboe

Ballast material (organic, opal, calcite, lithogenic) is suggested to affect sinking speed of aggregates in the ocean. Here, we tested this hypothesis by incubating appendicularians in suspensions of different algae or Saharan dust, and observing the sinking speed of the marine snow formed by their discarded houses. We show that calcite increases the sinking speeds of aggregates by ~100% and lithogenic material by ~150% while opal only has a minor effect. Furthermore the effect of ballast particle concentration was causing a 33 m d-1 increase in sinking speed for a 5×105 µm3 ml-1 increase in particle concentration, near independent on ballast type. We finally compare our observations to the literature and stress the need to generate aggregates similar to those in nature in order to get realistic estimates of the impact of ballast particles on sinking speeds.


Scientific Reports | 2015

Accumulation of nanoparticles in " jellyfish " mucus: a bio-inspired route to decontamination of nano-waste

Amit Patwa; Alain Thiéry; Fabien Lombard; Martin K.S. Lilley; Claire Boisset; Jean-François Bramard; Jean-Yves Bottero; Philippe Barthélémy

The economic and societal impacts of nano-materials are enormous. However, releasing such materials in the environment could be detrimental to human health and the ecological biosphere. Here we demonstrate that gold and quantum dots nanoparticles bio-accumulate into mucus materials coming from natural species such as jellyfish. One strategy that emerges from this finding would be to take advantage of these trapping properties to remove nanoparticles from contaminated water.


Evodevo | 2015

Comparative muscle development of scyphozoan jellyfish with simple and complex life cycles

Rebecca R. Helm; Stefano Tiozzo; Martin K.S. Lilley; Fabien Lombard; Casey W. Dunn

BackgroundSimple life cycles arise from complex life cycles when one or more developmental stages are lost. This raises a fundamental question - how can an intermediate stage, such as a larva, be removed, and development still produce a normal adult? To address this question, we examined the development in several species of pelagiid jellyfish. Most members of Pelagiidae have a complex life cycle with a sessile polyp that gives rise to ephyrae (juvenile medusae); but one species within Pelagiidae, Pelagia noctiluca, spends its whole life in the water column, developing from a larva directly into an ephyra. In many complex life cycles, adult features develop from cell populations that remain quiescent in larvae, and this is known as life cycle compartmentalization and may facilitate the evolution of direct life cycles. A second type of metamorphic processes, known as remodeling, occurs when adult features are formed through modification of already differentiated larval structures. We examined muscle morphology to determine which of these alternatives may be present in Pelagiidae.ResultsWe first examined the structure and development of polyp and ephyra musculature in Chrysaora quinquecirrha, a close relative of P. noctiluca with a complex life cycle. Using phallotoxin staining and confocal microscopy, we verified that polyps have four to six cord muscles that persist in strobilae and discovered that cord muscles is physically separated from ephyra muscle. When cord muscle is removed from ephyra segments, normal ephyra muscle still develops. This suggests that polyp cord muscle is not necessary for ephyra muscle formation. We also found no evidence of polyp-like muscle in P. noctiluca. In both species, we discovered that ephyra muscle arises de novo in a similar manner, regardless of the life cycle.ConclusionsThe separate origins of polyp and ephyra muscle in C. quinquecirrha and the absence of polyp-like muscle in P. noctiluca suggest that polyp muscle is not remodeled to form ephyra muscle in Pelagiidae. Life cycle stages in Scyphozoa may instead be compartmentalized. Because polyp muscle is not directly remodeled, this may have facilitated the loss of the polyp stage in the evolution of P. noctiluca.


Nature microbiology | 2017

Surface properties of SAR11 bacteria facilitate grazing avoidance

Ayelet Dadon-Pilosof; Keats R. Conley; Yuval Jacobi; Markus Haber; Fabien Lombard; Kelly R. Sutherland; Laura Steindler; Yaron Tikochinski; Michael Richter; Frank Oliver Glöckner; Marcelino T. Suzuki; Nyree J. West; Amatzia Genin; Gitai Yahel

Oceanic ecosystems are dominated by minute microorganisms that play a major role in food webs and biogeochemical cycles1. Many microorganisms thrive in the dilute environment due to their capacity to locate, attach to, and use patches of nutrients and organic matter2,3. We propose that some free-living planktonic bacteria have traded their ability to stick to nutrient-rich organic particles for a non-stick cell surface that helps them evade predation by mucous filter feeders. We used a combination of in situ sampling techniques and next-generation sequencing to study the biological filtration of microorganisms at the phylotype level. Our data indicate that some marine bacteria, most notably the highly abundant Pelagibacter ubique and most other members of the SAR 11 clade of the Alphaproteobacteria, can evade filtration by slipping through the mucous nets of both pelagic and benthic tunicates. While 0.3 µm polystyrene beads and other similarly-sized bacteria were efficiently filtered, SAR11 members were not captured. Reversed-phase chromatography revealed that most SAR11 bacteria have a much less hydrophobic cell surface than that of other planktonic bacteria. Our data call for a reconsideration of the role of surface properties in biological filtration and predator-prey interactions in aquatic systems.In situ sampling reveals that members of the SAR11 clade show significantly lower retention by mucous filter feeders, and that this is probably due to their reduced hydrophobic cell surface, suggesting that cell surface properties are important factors in predator–prey interactions.


Journal of Plankton Research | 2018

Vertical structure of plankton communities in areas of European eel larvae distribution in the Sargasso Sea

Peter Munk; Torkel Gissel Nielsen; Cornelia Jaspers; Daniel Jiro Ayala; Kam W. Tang; Fabien Lombard; Lasse Riemann

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Proceedings of the Royal Society B: Biological Sciences | 2018

Mammoth grazers on the ocean's minuteness: a review of selective feeding using mucous meshes

Keats R. Conley; Fabien Lombard; Kelly R. Sutherland

Mucous-mesh grazers (pelagic tunicates and thecosome pteropods) are common in oceanic waters and efficiently capture, consume and repackage particles many orders of magnitude smaller than themselves. They feed using an adhesive mucous mesh to capture prey particles from ambient seawater. Historically, their grazing process has been characterized as non-selective, depending only on the size of the prey particle and the pore dimensions of the mesh. The purpose of this review is to reverse this assumption by reviewing recent evidence that shows mucous-mesh feeding can be selective. We focus on large planktonic microphages as a model of selective mucus feeding because of their important roles in the ocean food web: as bacterivores, prey for higher trophic levels, and exporters of carbon via mucous aggregates, faecal pellets and jelly-falls. We identify important functional variations in the filter mechanics and hydrodynamics of different taxa. We review evidence that shows this feeding strategy depends not only on the particle size and dimensions of the mesh pores, but also on particle shape and surface properties, filter mechanics, hydrodynamics and grazer behaviour. As many of these organisms remain critically understudied, we conclude by suggesting priorities for future research.


Archive | 2018

TARA Mediterranean Expedition: Assessing the Impact of Microplastics on Mediterranean Ecosystem

Maria Luiza Pedrotti; Maria Grazia Mazzocchi; Fabien Lombard; François Galgani; Marie Emmanuelle Kerros; Maryvonne Henry; Amanda Elineau; Stéphanie Petit; María Luz Fernandez-de-Puelles; Stéphane Gasparini; Valentina Tirelli; Jean-Louis Jamet; Gabriel Gorsky

TARA-Mediterranean expedition crossed the entire Mediterranean Sea in 2014 to study the distribution and concentration of floating microplastics and zooplankton. Surface samples were collected with a 330 µm Manta net, plastics were sorted from 124 samples and digitally imaged with the ZoosCan system. Results showed that plastic fragments were present in all samples with an average of 2.6 x 105 items/km2 and values varying from 2 x 103 items/km2 in the Eastern basin, to more than 2 x 106 items/km2 in the Western basin. Coastal zones of Naples, Corsica and Marseille were clearly identified as areas of particularly high plastic concentration.


Frontiers in Marine Science | 2018

Symbiont chloroplasts remain active during bleaching-like response induced by thermal stress in Collozoum pelagicum (Collodaria, Retaria)

Emilie Villar; Vincent Dani; Estelle Bigeard; Tatiana Linhart; Miguel Mendez Sandin; Charles Bachy; Christophe Six; Fabien Lombard; Cécile Sabourault; Fabrice Not

Collodaria (Retaria) are important contributors to planktonic communities and biogeochemical processes (e.g. the biologic pump) in oligotrophic oceans. Similarly to corals, Collodaria live in symbiosis with dinoflagellate algae, a relationship that is thought to explain partly their ecological success. In the context of global change, the robustness of the symbiotic interaction and potential subsequent bleaching events are of primary interest for oceanic ecosystems functioning. In the present study, we compared the ultrastructure, morphology, symbiont density, photosynthetic capacities and respiration rates of colonial Collodaria exposed to a range of temperatures corresponding to natural conditions (21°C), moderate (25°C) and high (28°C) thermal stress. We showed that symbiont density immediately decreased when temperature rose to 25°C, while the overall Collodaria holobiont metabolic activity increased. When temperature reached 28°C, the holobiont respiration nearly stopped and the host morphological structure was largely damaged, as if the host tolerance threshold has been crossed. Over the course of the experiment, the photosynthetic capacities of remaining algal symbionts were stable, chloroplasts being the last degraded organelles in the microalgae. These results contribute to a better characterization and understanding of temperature-induced bleaching processes in planktonic photosymbioses.


Nature microbiology | 2017

Author Correction: Surface properties of SAR11 bacteria facilitate grazing avoidance

Ayelet Dadon-Pilosof; Keats R. Conley; Yuval Jacobi; Markus Haber; Fabien Lombard; Kelly R. Sutherland; Laura Steindler; Yaron Tikochinski; Michael Richter; Frank Oliver Glöckner; Marcelino T. Suzuki; Nyree J. West; Amatzia Genin; Gitai Yahel

In the version of this Letter originally published, the authors incorrectly stated that primers 28F-519R were reported in ref. 54 to underestimate the abundance of SAR11 in the ocean. This statement has now been amended in all versions of the Letter.

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Gabriel Gorsky

Centre national de la recherche scientifique

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Thomas Kiørboe

Technical University of Denmark

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Cornelia Jaspers

Technical University of Denmark

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Antoine Sciandra

Centre national de la recherche scientifique

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Laurent Bopp

Centre national de la recherche scientifique

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