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Featured researches published by Fachuang Lu.


Phytochemistry Reviews | 2004

Lignins: Natural polymers from oxidative coupling of 4-hydroxyphenyl- propanoids

John Ralph; Knut Lundquist; Gösta Brunow; Fachuang Lu; Hoon Kim; Paul F. Schatz; Jane M. Marita; Ronald D. Hatfield; Sally A. Ralph; Jørgen Holst Christensen; Wout Boerjan

AbstractLignins are complex natural polymers resulting from oxidative coupling of, primarily, 4-hydroxyphenylpropanoids. An understanding of their nature is evolving as a result of detailed structural studies, recently aided by the availability of lignin-biosynthetic-pathway mutants and transgenics. The currently accepted theory is that the lignin polymer is formed by combinatorial-like phenolic coupling reactions, via radicals generated by peroxidase-H2O2, under simple chemical control where monolignols react endwise with the growing polymer. As a result, the actual structure of the lignin macromolecule is not absolutely defined or determined. The ``randomness of linkage generation (which is not truly statistically random but governed, as is any chemical reaction, by the supply of reactants, the matrix, etc.) and the astronomical number of possible isomers of even a simple polymer structure, suggest a low probability of two lignin macromolecules being identical. A recent challenge to the currently accepted theory of chemically controlled lignification, attempting to bring lignin into line with more organized biopolymers such as proteins, is logically inconsistent with the most basic details of lignin structure. Lignins may derive in part from monomers and conjugates other than the three primary monolignols (p-coumaryl, coniferyl, and sinapyl alcohols). The plasticity of the combinatorial polymerization reactions allows monomer substitution and significant variations in final structure which, in many cases, the plant appears to tolerate. As such, lignification is seen as a marvelously evolved process allowing plants considerable flexibility in dealing with various environmental stresses, and conferring on them a striking ability to remain viable even when humans or nature alter ``required lignin-biosynthetic-pathway genes/enzymes. The malleability offers significant opportunities to engineer the structures of lignins beyond the limits explored to date.nAbbreviations: 4CL – 4-coumarate:CoA ligase; C3H –p-coumarate 3-hydroxylase; HCT –p-hydroxycinnamoyl-CoA: quinate shikimate p-hydroxycinnamoyltransferase; CCoAOMT – caffeoyl-CoA O-methyltransferase; CCR – cinnamoyl-CoA reductase; F5H – ferulate 5-hydroxylase; CAld5H – coniferaldehyde 5-hydroxylase; COMT – caffeic acid O-methyltransferase; AldOMT – (5-hydroxyconifer)aldehyde O-methyltransferase; CAD – cinnamyl alcohol dehydrogenase; NMR – nuclear magnetic resonance (spectroscopy); DFRC – derivatization followed by reductive cleavage; TIZ – tosylation, iodination, zinc (a DFRC method); DHP – dehydrogenation polymer.


Phytochemistry Reviews | 2004

Peroxidase-dependent cross-linking reactions of p-hydroxycinnamates in plant cell walls

John Ralph; Mirko Bunzel; Jane M. Marita; Ronald D. Hatfield; Fachuang Lu; Hoon Kim; Paul F. Schatz; John H. Grabber; Hans Steinhart

AbstractPeroxidases are heavily implicated in plant cell wall cross-linking reactions, altering the properties of the wall and impacting its utilization. Polysaccharide-polysaccharide cross-linking in grasses is achieved by dehydrodimerization of hydroxycinnamate-polysaccharide esters; a complex array of hydroxycinnamic acid dehydrodimers are released by saponification. Ferulates are the major cross-linking agents, but sinapate-ferulate cross-products have been discovered implicating sinapates in a similar role. New dehydrodimers have been authenticated, expanding our knowledge of the chemistry, role, and extent of cross-linking reactions. Ferulate dehydrotrimers have been discovered; whether these trimers truly cross-link three independent polysaccharide chains or only two remains to be determined. Hydroxycinnamates and their dehydrodimers also undergo radical coupling reactions with lignin monomers and possibly oligomers, resulting in lignin-polysaccharide cross-linking in the wall. Both polysaccharide-polysaccharide and lignin-polysaccharide cross-links inhibit the enzymatic hydrolysis of cell walls. The cross-linking process has particular relevance to plant physiology, human and animal nutrition and health, and food technology.nAbbreviations: CW – cell wall; DFA – dehydrodiferulic acid (or dehydrodiferulate in context); DSA – dehydrodisinapic acid; TFA – dehydrotriferulic acid; SA – sinapic acid (1S); TA – thomasidioic acid (5C3SS); IDF – insoluble dietary fiber; SDF – soluble dietary fiber; GC-MS – gas chromatography-mass spectrometry; NMR – nuclear magnetic resonance (spectroscopy).


Phytochemistry | 2001

Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR.

John Ralph; Catherine Lapierre; Jane M. Marita; Hoon Kim; Fachuang Lu; Ronald D. Hatfield; Sally A. Ralph; Clint Chapple; Rochus Franke; Matt R Hemm; Jan Van Doorsselaere; Ronald R. Sederoff; David M. O'Malley; Jay T. Scott; John MacKay; Nabila Yahiaoui; Alain-M. Boudet; Michel Pean; Gilles Pilate; Lise Jouanin; Wout Boerjan

Studying lignin-biosynthetic-pathway mutants and transgenics provides insights into plant responses to perturbations of the lignification system, and enhances our understanding of normal lignification. When enzymes late in the pathway are downregulated, significant changes in the composition and structure of lignin may result. NMR spectroscopy provides powerful diagnostic tools for elucidating structures in the difficult lignin polymer, hinting at the chemical and biochemical changes that have occurred. COMT (caffeic acid O-methyl transferase) downregulation in poplar results in the incorporation of 5-hydroxyconiferyl alcohol into lignins via typical radical coupling reactions, but post-coupling quinone methide internal trapping reactions produce novel benzodioxane units in the lignin. CAD (cinnamyl alcohol dehydrogenase) downregulation results in the incorporation of the hydroxycinnamyl aldehyde monolignol precursors intimately into the polymer. Sinapyl aldehyde cross-couples 8-O-4 with both guaiacyl and syringyl units in the growing polymer, whereas coniferyl aldehyde cross-couples 8-O-4 only with syringyl units, reflecting simple chemical cross-coupling propensities. The incorporation of hydroxycinnamyl aldehyde and 5-hydroxyconiferyl alcohol monomers indicates that these monolignol intermediates are secreted to the cell wall for lignification. The recognition that novel units can incorporate into lignins portends significantly expanded opportunities for engineering the composition and consequent properties of lignin for improved utilization of valuable plant resources.


Environmental Microbiology | 2008

Evidence for cleavage of lignin by a brown rot basidiomycete

Daniel J. Yelle; John Ralph; Fachuang Lu; Kenneth E. Hammel

Biodegradation by brown-rot fungi is quantitatively one of the most important fates of lignocellulose in nature. It has long been thought that these basidiomycetes do not degrade lignin significantly, and that their activities on this abundant aromatic biopolymer are limited to minor oxidative modifications. Here we have applied a new technique for the complete solubilization of lignocellulose to show, by one-bond (1)H-(13)C correlation nuclear magnetic resonance spectroscopy, that brown rot of spruce wood by Gloeophyllum trabeum resulted in a marked, non-selective depletion of all intermonomer side-chain linkages in the lignin. The resulting polymer retained most of its original aromatic residues and was probably interconnected by new linkages that lack hydrogens and are consequently invisible in one-bond (1)H-(13)C correlation spectra. Additional work is needed to characterize these linkages, but it is already clear that the aromatic polymer remaining after extensive brown rot is no longer recognizable as lignin.


Chemical Communications | 2002

Preliminary evidence for sinapyl acetate as a lignin monomer in kenaf.

Fachuang Lu; John Ralph

9-Acetylated syringyl 8-8-linked dehydrodimers are degradation products released from kenaf lignins, implicating sinapyl acetate as a lignin precursor.


Journal of Wood Chemistry and Technology | 2006

NMR Studies on the Occurrence of Spirodienone Structures in Lignins

Liming Zhang; Göran Gellerstedt; John Ralph; Fachuang Lu

Abstract Spirodienone structures have been detected in spruce, birch, and kenaf lignin isolates. NMR signals corresponding to guaiacyl and syringyl spirodienones were fully identified and assigned based on 13C, QUAT, HSQC, HSQC‐TOCSY, and HMBC NMR data. Spruce lignin contains spirodienone structures of the guaiacyl type. Syringyl spirodienones dominate in kenaf and birch lignins. Each type of spirodienone was found to be present in two different stereoisomeric forms, with one of the isomers being more prevalent. Signal integrations indicate that about three spirodienones per 100 phenylpropanoid units are present in the spruce and birch lignins and about four in the kenaf lignin.


Organic and Biomolecular Chemistry | 2006

Synthesis and identification of 2,5-bis-(4-hydroxy-3-methoxyphenyl)-tetrahydrofuran-3,4-dicarboxylic acid, an unanticipated ferulate 8–8-coupling product acylating cereal plant cell walls

Paul F. Schatz; John Ralph; Fachuang Lu; Ilia A. Guzei; Mirko Bunzel

A new product implicated in cereal grain polysaccharide cross-linking has been authenticated by independent synthesis. Saponification of cereal grain fiber releases the RRRS/SSSR-isomer of 2,5-bis-(4-hydroxy-3-methoxyphenyl)-tetrahydrofuran-3,4-dicarboxylic acid. The parent ester logically derives from 8-8-coupling of ferulate followed by water addition to one of the incipient quinone methide moieties and internal trapping of the other. The finding adds complexity to the analysis of plant cell wall cross-linking, but provides clues to important polysaccharide cross-linking pathways occurring in planta.


Journal of Biological Chemistry | 2002

Identification of the structure and origin of thioacidolysis marker compounds for cinnamyl alcohol dehydrogenase deficiency in angiosperms

Hoon Kim; John Ralph; Fachuang Lu; Gilles Pilate; Jean-Charles Leplé; Brigitte Pollet; Catherine Lapierre


59th Appita Annual Conference and Exhibition: Incorporating the 13th ISWFPC (International Symposium on Wood, Fibre and Pulping Chemistry), Auckland, New Zealand, 16-19 May 2005: Proceedings | 2005

Novel - Structures in Lignins Incorporating Acylated Monolignols

Fachuang Lu; John Ralph


Archive | 1998

Efficient Ether Cleavage in Lignins: The Derivatization Followed by Reductive Cleavage Procedure as a Basis for New Analytical Methods

Fachuang Lu; John Ralph

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John Ralph

Great Lakes Bioenergy Research Center

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Hoon Kim

Great Lakes Bioenergy Research Center

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Paul F. Schatz

Agricultural Research Service

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Sally A. Ralph

United States Forest Service

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Jane M. Marita

Agricultural Research Service

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Ronald D. Hatfield

Agricultural Research Service

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Daniel J. Yelle

United States Forest Service

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Kenneth E. Hammel

United States Department of Agriculture

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Mirko Bunzel

Karlsruhe Institute of Technology

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