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Featured researches published by Fei-Xue Fu.


Journal of Phycology | 2007

EFFECTS OF INCREASED TEMPERATURE AND CO2 ON PHOTOSYNTHESIS, GROWTH, AND ELEMENTAL RATIOS IN MARINE SYNECHOCOCCUS AND PROCHLOROCOCCUS (CYANOBACTERIA)1

Fei-Xue Fu; Mark E. Warner; Yaohong Zhang; Yuanyuan Feng; David A. Hutchins

Little is known about the combined impacts of future CO2 and temperature increases on the growth and physiology of marine picocyanobacteria. We incubated Synechococcus and Prochlorococcus under present‐day (380 ppm) or predicted year‐2100 CO2 levels (750 ppm), and under normal versus elevated temperatures (+4°C) in semicontinuous cultures. Increased temperature stimulated the cell division rates of Synechococcus but not Prochlorococcus. Doubled CO2 combined with elevated temperature increased maximum chl a–normalized photosynthetic rates of Synechococcus four times relative to controls. Temperature also altered other photosynthetic parameters (α, Φmax, Ek, and ) in Synechococcus, but these changes were not observed for Prochlorococcus. Both increased CO2 and temperature raised the phycobilin and chl a content of Synechococcus, while only elevated temperature increased divinyl chl a in Prochlorococcus. Cellular carbon (C) and nitrogen (N) quotas, but not phosphorus (P) quotas, increased with elevated CO2 in Synechococcus, leading to ∼20% higher C:P and N:P ratios. In contrast, Prochlorococcus elemental composition remained unaffected by CO2, but cell volume and elemental quotas doubled with increasing temperature while maintaining constant stoichiometry. Synechococcus showed a much greater response to CO2 and temperature increases for most parameters measured, compared with Prochlorococcus. Our results suggest that global change could influence the dominance of Synechococcus and Prochlorococcus ecotypes, with likely effects on oligotrophic food‐web structure. However, individual picocyanobacteria strains may respond quite differently to future CO2 and temperature increases, and caution is needed when generalizing their responses to global change in the ocean.


European Journal of Phycology | 2008

Interactive effects of increased pCO 2 , temperature and irradiance on the marine coccolithophore Emiliania huxleyi (Prymnesiophyceae)

Yuanyuan Feng; Mark E. Warner; Yaohong Zhang; Jun Sun; Fei-Xue Fu; Julie M. Rose; David A. Hutchins

We examined the effects of increased temperature, pCO2, and irradiance on a calcifying strain of the marine coccolithophore Emiliania huxleyi in semi-continuous laboratory cultures. Emiliania huxleyi CCMP 371 was cultured in four temperature and pCO2 treatments at both low and high irradiance (50 and 400 µmol photons m−2 s−1): (i) 20°C and 375 ppm CO2 (ambient control); (ii) 20°C and 750 ppm CO2 (high pCO2); (iii) 24°C and 375 ppm CO2 (high temperature); and (iv) 24°C and 750 ppm CO2 (‘greenhouse’). The growth of E. huxleyi was greatly accelerated by elevated temperature at low irradiance. Photosynthesis was significantly promoted by increases in both pCO2 and temperature at both irradiances. Higher cellular C/P ratios were found in the higher CO2 treatments at high irradiance, indicating a reduced requirement for P. The PIC/POC (particulate inorganic to organic carbon) ratio remained constant at low light, regardless of CO2 or temperature conditions. However, both the cellular PIC content and PIC/POC ratio were greatly decreased by elevated irradiance, and were further decreased by increased pCO2 only at high light, indicating a combined effect of CO2 and light on calcification. These results suggest that future trends of CO2 enrichment, sea-surface warming and exposure to higher mean irradiances from intensified stratification will have a large influence on the growth of Emiliania huxleyi, and potentially on the PIC/POC ‘rain ratio’. Our study demonstrates that it is possible to obtain a more complete picture of global change impacts on marine phytoplankton by designing experiments that consider multiple global change variables and their mutual interactions.


PLOS ONE | 2013

Marine phytoplankton temperature versus growth responses from polar to tropical waters – outcome of a scientific community-wide study

Philip W. Boyd; Tatiana A. Rynearson; Evelyn Armstrong; Fei-Xue Fu; Kendra Hayashi; Zhangxi Hu; David A. Hutchins; Raphael M. Kudela; Elena Litchman; Margaret R. Mulholland; Uta Passow; Robert F. Strzepek; Kerry A. Whittaker; Elizabeth Yu; Mridul K. Thomas

“It takes a village to finish (marine) science these days” Paraphrased from Curtis Huttenhower (the Human Microbiome project) The rapidity and complexity of climate change and its potential effects on ocean biota are challenging how ocean scientists conduct research. One way in which we can begin to better tackle these challenges is to conduct community-wide scientific studies. This study provides physiological datasets fundamental to understanding functional responses of phytoplankton growth rates to temperature. While physiological experiments are not new, our experiments were conducted in many laboratories using agreed upon protocols and 25 strains of eukaryotic and prokaryotic phytoplankton isolated across a wide range of marine environments from polar to tropical, and from nearshore waters to the open ocean. This community-wide approach provides both comprehensive and internally consistent datasets produced over considerably shorter time scales than conventional individual and often uncoordinated lab efforts. Such datasets can be used to parameterise global ocean model projections of environmental change and to provide initial insights into the magnitude of regional biogeographic change in ocean biota in the coming decades. Here, we compare our datasets with a compilation of literature data on phytoplankton growth responses to temperature. A comparison with prior published data suggests that the optimal temperatures of individual species and, to a lesser degree, thermal niches were similar across studies. However, a comparison of the maximum growth rate across studies revealed significant departures between this and previously collected datasets, which may be due to differences in the cultured isolates, temporal changes in the clonal isolates in cultures, and/or differences in culture conditions. Such methodological differences mean that using particular trait measurements from the prior literature might introduce unknown errors and bias into modelling projections. Using our community-wide approach we can reduce such protocol-driven variability in culture studies, and can begin to address more complex issues such as the effect of multiple environmental drivers on ocean biota.


Nature | 2004

The impact of surface-adsorbed phosphorus on phytoplankton Redfield stoichiometry

Sergio A. Sañudo-Wilhelmy; Antonio Tovar-Sánchez; Fei-Xue Fu; Douglas G. Capone; Edward J. Carpenter; David A. Hutchins

The Redfield ratio of 106 carbon:16 nitrogen:1 phosphorus in marine phytoplankton is one of the foundations of ocean biogeochemistry, with applications in algal physiology, palaeoclimatology and global climate change. However, this ratio varies substantially in response to changes in algal nutrient status and taxonomic affiliation. Here we report that Redfield ratios are also strongly affected by partitioning into surface-adsorbed and intracellular phosphorus pools. The C:N:surface-adsorbed P (80–105 C:15–18 N:1 P) and total (71–80 C:13–14 N:1 P) ratios in natural populations and cultures of Trichodesmium were close to Redfield values and not significantly different from each other. In contrast, intracellular ratios consistently exceeded the Redfield ratio (316–434 C:59–83 N:1 intracellular P). These high intracellular ratios were associated with reduced N2 fixation rates, suggestive of phosphorus deficiency. Other algal species also have substantial surface-adsorbed phosphorus pools, suggesting that our Trichodesmium results are generally applicable to all phytoplankton. Measurements of the distinct phytoplankton phosphorus pools may be required to assess nutrient limitation accurately from elemental composition. Deviations from Redfield stoichiometry may be attributable to surface adsorption of phosphorus rather than to biological processes, and this scavenging could affect the interpretation of marine nutrient inventories and ecosystem models.


Philosophical Transactions of the Royal Society B | 2013

Short- and long-term conditioning of a temperate marine diatom community to acidification and warming

Avery O. Tatters; Michael Y. Roleda; Astrid Schnetzer; Fei-Xue Fu; Catriona L. Hurd; Philip W. Boyd; David A. Caron; Alle A. Y. Lie; Linn Hoffmann; David A. Hutchins

Ocean acidification and greenhouse warming will interactively influence competitive success of key phytoplankton groups such as diatoms, but how long-term responses to global change will affect community structure is unknown. We incubated a mixed natural diatom community from coastal New Zealand waters in a short-term (two-week) incubation experiment using a factorial matrix of warming and/or elevated pCO2 and measured effects on community structure. We then isolated the dominant diatoms in clonal cultures and conditioned them for 1 year under the same temperature and pCO2 conditions from which they were isolated, in order to allow for extended selection or acclimation by these abiotic environmental change factors in the absence of interspecific interactions. These conditioned isolates were then recombined into ‘artificial’ communities modelled after the original natural assemblage and allowed to compete under conditions identical to those in the short-term natural community experiment. In general, the resulting structure of both the unconditioned natural community and conditioned ‘artificial’ community experiments was similar, despite differences such as the loss of two species in the latter. pCO2 and temperature had both individual and interactive effects on community structure, but temperature was more influential, as warming significantly reduced species richness. In this case, our short-term manipulative experiment with a mixed natural assemblage spanning weeks served as a reasonable proxy to predict the effects of global change forcing on diatom community structure after the component species were conditioned in isolation over an extended timescale. Future studies will be required to assess whether or not this is also the case for other types of algal communities from other marine regimes.


Journal of Phycology | 2005

PHOSPHATE UPTAKE AND GROWTH KINETICS OF TRICHODESMIUM (CYANOBACTERIA) ISOLATES FROM THE NORTH ATLANTIC OCEAN AND THE GREAT BARRIER REEF, AUSTRALIA†

Fei-Xue Fu; Yaohong Zhang; P.R.F. Bell; David A. Hutchins

We compared inorganic phosphate (Pi) uptake and growth kinetics of two cultures of the diazotrophic cyanobacterium Trichodesmium isolated from the North Atlantic Ocean (IMS101) and from the Great Barrier Reef, Australia (GBRTRLI101). Phosphate‐limited cultures had up to six times higher maximum Pi uptake rates than P‐replete cultures in both strains. For strain GBRTRLI101, cell‐specific Pi uptake rates were nearly twice as high, due to larger cell size, but P‐specific maximum uptake rates were similar for both isolates. Half saturation constants were 0.4 and 0.6 μM for Pi uptake and 0.1 and 0.2 μM for growth in IMS101 and GBRTRLI101, respectively. Phosphate uptake in both strains was correlated to growth rates rather than to light or temperature. The cellular phosphorus quota for both strains increased with increasing Pi up to 1.0 μM. The C:P ratios were 340–390 and N:P ratios were 40–45 for both strains under severely P‐limited growth conditions, similar to reported values for natural populations from the tropical Atlantic and Pacific Oceans. The C:P and N:P ratios were near Redfield values in medium with >1.0 μM Pi. The North Atlantic strain IMS101 is better adapted to growing on Pi at low concentrations than is GBRTRLI101 from the more Pi‐enriched Great Barrier Reef. However, neither strain can achieve appreciable growth at the very low (nanomolar) Pi concentrations found in most oligotrophic regimes. Phosphate could be an important source of phosphorus for Trichodesmium on the Great Barrier Reef, but populations growing in the oligotrophic open ocean must rely primarily on dissolved organic phosphorus sources.


PLOS ONE | 2012

High CO2 and silicate limitation synergistically increase the toxicity of Pseudo-nitzschia fraudulenta.

Avery O. Tatters; Fei-Xue Fu; David A. Hutchins

Anthropogenic CO2 is progressively acidifying the ocean, but the responses of harmful algal bloom species that produce toxins that can bioaccumulate remain virtually unknown. The neurotoxin domoic acid is produced by the globally-distributed diatom genus Pseudo-nitzschia. This toxin is responsible for amnesic shellfish poisoning, which can result in illness or death in humans and regularly causes mass mortalities of marine mammals and birds. Domoic acid production by Pseudo-nitzschia cells is known to be regulated by nutrient availability, but potential interactions with increasing seawater CO2 concentrations are poorly understood. Here we present experiments measuring domoic acid production by acclimatized cultures of Pseudo-nitzschia fraudulenta that demonstrate a strong synergism between projected future CO2 levels (765 ppm) and silicate-limited growth, which greatly increases cellular toxicity relative to growth under modern atmospheric (360 ppm) or pre-industrial (200 ppm) CO2 conditions. Cellular Si∶C ratios decrease with increasing CO2, in a trend opposite to that seen for domoic acid production. The coastal California upwelling system where this species was isolated currently exhibits rapidly increasing levels of anthropogenic acidification, as well as widespread episodic silicate limitation of diatom growth. Our results suggest that the current ecosystem and human health impacts of toxic Pseudo-nitzschia blooms could be greatly exacerbated by future ocean acidification and ‘carbon fertilization’ of the coastal ocean.


The ISME Journal | 2011

CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom

Andrew L. King; Sergio A. Sañudo-Wilhelmy; Karine Leblanc; David A. Hutchins; Fei-Xue Fu

Phytoplankton growth can be limited by numerous inorganic nutrients and organic growth factors. Using the subarctic diatom Attheya sp. in culture studies, we examined how the availability of vitamin B12 and carbon dioxide partial pressure (pCO2) influences growth rate, primary productivity, cellular iron (Fe), cobalt (Co), zinc (Zn) and cadmium (Cd) quotas, and the net use efficiencies (NUEs) of these bioactive trace metals (mol C fixed per mol cellular trace metal per day). Under B12-replete conditions, cells grown at high pCO2 had lower Fe, Zn and Cd quotas, and used those trace metals more efficiently in comparison with cells grown at low pCO2. At high pCO2, B12-limited cells had ∼50% lower specific growth and carbon fixation rates, and used Fe ∼15-fold less efficiently, and Zn and Cd ∼3-fold less efficiently, in comparison with B12-replete cells. The observed higher Fe, Zn and Cd NUE under high pCO2/B12-replete conditions are consistent with predicted downregulation of carbon-concentrating mechanisms. Co quotas of B12-replete cells were ∼5- to 14-fold higher in comparison with B12-limited cells, suggesting that >80% of cellular Co of B12-limited cells was likely from B12. Our results demonstrate that CO2 and vitamin B12 interactively influence growth, carbon fixation, trace metal requirements and trace metal NUE of this diatom. This suggests the need to consider complex feedback interactions between multiple environmental factors for this biogeochemically critical group of phytoplankton in the last glacial maximum as well as the current and future changing ocean.


Nature Communications | 2015

Irreversibly increased nitrogen fixation in Trichodesmium experimentally adapted to elevated carbon dioxide

David A. Hutchins; Nathan G. Walworth; Eric A. Webb; Mak A. Saito; Dawn M. Moran; Matthew R. McIlvin; Jasmine Gale; Fei-Xue Fu

Nitrogen fixation rates of the globally distributed, biogeochemically important marine cyanobacterium Trichodesmium increase under high carbon dioxide (CO2) levels in short-term studies due to physiological plasticity. However, its long-term adaptive responses to ongoing anthropogenic CO2 increases are unknown. Here we show that experimental evolution under extended selection at projected future elevated CO2 levels results in irreversible, large increases in nitrogen fixation and growth rates, even after being moved back to lower present day CO2 levels for hundreds of generations. This represents an unprecedented microbial evolutionary response, as reproductive fitness increases acquired in the selection environment are maintained after returning to the ancestral environment. Constitutive rate increases are accompanied by irreversible shifts in diel nitrogen fixation patterns, and increased activity of a potentially regulatory DNA methyltransferase enzyme. High CO2-selected cell lines also exhibit increased phosphorus-limited growth rates, suggesting a potential advantage for this keystone organism in a more nutrient-limited, acidified future ocean.


Evolution | 2013

SHORT- VERSUS LONG-TERM RESPONSES TO CHANGING CO2 IN A COASTAL DINOFLAGELLATE BLOOM: IMPLICATIONS FOR INTERSPECIFIC COMPETITIVE INTERACTIONS AND COMMUNITY STRUCTURE

Avery O. Tatters; Astrid Schnetzer; Fei-Xue Fu; Alle Y.A. Lie; David A. Caron; David A. Hutchins

Increasing pCO2 (partial pressure of CO2) in an “acidified” ocean will affect phytoplankton community structure, but manipulation experiments with assemblages briefly acclimated to simulated future conditions may not accurately predict the long‐term evolutionary shifts that could affect inter‐specific competitive success. We assessed community structure changes in a natural mixed dinoflagellate bloom incubated at three pCO2 levels (230, 433, and 765 ppm) in a short‐term experiment (2 weeks). The four dominant species were then isolated from each treatment into clonal cultures, and maintained at all three pCO2 levels for approximately 1 year. Periodically (4, 8, and 12 months), these pCO2‐conditioned clones were recombined into artificial communities, and allowed to compete at their conditioning pCO2 level or at higher and lower levels. The dominant species in these artificial communities of CO2‐conditioned clones differed from those in the original short‐term experiment, but individual species relative abundance trends across pCO2 treatments were often similar. Specific growth rates showed no strong evidence for fitness increases attributable to conditioning pCO2 level. Although pCO2 significantly structured our experimental communities, conditioning time and biotic interactions like mixotrophy also had major roles in determining competitive outcomes. New methods of carrying out extended mixed species experiments are needed to accurately predict future long‐term phytoplankton community responses to changing pCO2.

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David A. Hutchins

University of Southern California

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Eric A. Webb

University of Southern California

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Nathan G. Walworth

University of Southern California

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Michael D. Lee

University of Southern California

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Avery O. Tatters

University of Southern California

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Nathan S. Garcia

University of Southern California

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Mak A. Saito

Woods Hole Oceanographic Institution

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