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Featured researches published by Fernanda Bravim.


Annals of the New York Academy of Sciences | 2010

High hydrostatic pressure and the cell membrane: stress response of Saccharomyces cerevisiae.

Fernanda Bravim; Jéssica M. de Freitas; A. Alberto R. Fernandes; Patricia Machado Bueno Fernandes

The brewing and baking yeast Saccharomyces cerevisiae is a useful eukaryotic model of stress response systems whose study could lead to the understanding of stress response mechanisms in other organisms. High hydrostatic pressure (HHP) exerts broad effects upon yeast cells, interfering with cell membranes, cellular architecture, and the processes of polymerization and denaturation of proteins. In this review, we focus on the effect of HHP on the S. cerevisiae cell membrane and describe the main signaling pathways involved in the pressure response.


Fems Yeast Research | 2012

Influence of cellular fatty acid composition on the response of Saccharomyces cerevisiae to hydrostatic pressure stress

Jéssica M. de Freitas; Fernanda Bravim; David S. Buss; Elenice Moreira Lemos; A. Alberto R. Fernandes; Patricia Machado Bueno Fernandes

High hydrostatic pressure (HHP) interferes with cellular membrane structure. The orientation of lipid molecules is changed, especially in the vicinity of proteins, leading to decreased membrane fluidity. Adaptation to HHP requires increased membrane fluidity, often achieved through a rise in the proportion of unsaturated fatty acids. In this work, a desaturase-deficient Saccharomyces cerevisiae mutant strain (OLE1 gene deletion) was grown in media supplemented with fatty acids differing in size and number of unsaturations and submitted to pressure up to 200 MPa for 30 min. Desaturase-deficient yeast supplemented with palmitoleic acid demonstrated increased sensitivity to pressure compared to cells supplemented with oleic acid or a proportionate mixture of both acids. In contrast, yeast cells grown with linoleic and linolenic acids were more piezoresistant than cells treated with oleic acid. Furthermore, growth with palmitoleic acid led to higher levels of lipid peroxidation. Intracellular trehalose during HHP treatment increased cell tolerance to pressure. However, when trehalose remained extracellular cells were sensitised to pressure. Therefore, fatty acid composition and trehalose content might play a role in the protection of the cell membrane from oxidative damage produced by HHP, confirming that alteration in cell membrane fluidity is correlated with pressure resistance in yeast.


Journal of Industrial Microbiology & Biotechnology | 2010

Biotechnological properties of distillery and laboratory yeasts in response to industrial stresses.

Fernanda Bravim; Fernando L. Palhano; A. Alberto R. Fernandes; Patricia Machado Bueno Fernandes

The stress sensitivity of different wild-type strains was evaluated, as well as the response of cells arrested at different cell cycle positions to high hydrostatic pressure (HPP). HHP was chosen both for its importance in food decontamination and assessment of its suitability as a model for stress in general and understanding the yeast stress response. Studies were conducted with four industrial strains and four laboratory wild-type yeast strains (two haploid and two diploid) that differed in their backgrounds. Fundamental differences were found between the laboratory and industrial populations. Industrial strains were clearly more sensitive to hydrostatic pressure and ethanol stresses than the laboratory strains. However, ethanol production was higher in industrial strains than laboratory strains. Furthermore, no correlation was observed between ploidy and stress resistance. Yeast cells arrested in the G1 phase led to an enhancement in pressure tolerance compared to unarrested, G2 arrested, and S arrested cells. Moreover, cells arrested in the S phase were more sensitive to hydrostatic pressure than cells arrested in the G2 phase. Again, industrial strains were more sensitive than laboratory strains. HHP responses of industrial yeasts correlated well with both ethanol concentration and temperature stress, which suggests that it would be a useful model stress.


Current Pharmaceutical Biotechnology | 2012

High hydrostatic pressure activates transcription factors involved in Saccharomyces cerevisiae stress tolerance.

Fernanda Bravim; Lucas F. da Silva; Diego T. Souza; Soyeon I. Lippman; James R. Broach; A. Alberto R. Fernandes; Patricia Machado Bueno Fernandes

A number of transcriptional control elements are activated when Saccharomyces cerevisiae cells are submitted to various stress conditions, including high hydrostatic pressure (HHP). Exposure of Saccharomyces cerevisiae cells to HHP results in global transcriptional reprogramming, similar to that observed under other industrial stresses, such as temperature, ethanol and oxidative stresses. Moreover, treatment with a mild hydrostatic pressure renders yeast cells multistress tolerant. In order to identify transcriptional factors involved in coordinating response to high hydrostatic pressure, we performed a time series microarray expression analysis on a wild S. cerevisiae strain exposed to 50 MPa for 30 min followed by recovery at atmospheric pressure (0.1 MPa) for 5, 10 and 15 min. We identified transcription factors and corresponding DNA and RNA motifs targeted in response to hydrostatic pressure. Moreover, we observed that different motif elements are present in the promoters of induced or repressed genes during HHP treatment. Overall, as we have already published, mild HHP treatment to wild yeast cells provides multiple protection mechanisms, and this study suggests that the TFs and motifs identified as responding to HHP may be informative for a wide range of other biotechnological and industrial applications, such as fermentation, that may utilize HHP treatment.


Fems Yeast Research | 2016

High hydrostatic pressure leads to free radicals accumulation in yeast cells triggering oxidative stress

Fernanda Bravim; Mainã Mantovanelli Mota; A. Alberto R. Fernandes; Patricia Machado Bueno Fernandes

Saccharomyces cerevisiae is a unicellular organism that during the fermentative process is exposed to a variable environment; hence, resistance to multiple stress conditions is a desirable trait. The stress caused by high hydrostatic pressure (HHP) in S. cerevisiae resembles the injuries generated by other industrial stresses. In this study, it was confirmed that gene expression pattern in response to HHP displays an oxidative stress response profile which is expanded upon hydrostatic pressure release. Actually, reactive oxygen species (ROS) concentration level increased in yeast cells exposed to HHP treatment and an incubation period at room pressure led to a decrease in intracellular ROS concentration. On the other hand, ethylic, thermic and osmotic stresses did not result in any ROS accumulation in yeast cells. Microarray analysis revealed an upregulation of genes related to methionine metabolism, appearing to be a specific cellular response to HHP, and not related to other stresses, such as heat and osmotic stresses. Next, we investigated whether enhanced oxidative stress tolerance leads to enhanced tolerance to HHP stress. Overexpression of STF2 is known to enhance tolerance to oxidative stress and we show that it also leads to enhanced tolerance to HHP stress.


BMC Proceedings | 2014

High hydrostatic pressure upregulate central carbon metabolism genes in a distillery yeast strain

Mainã Mantovanelli Mota; Fernanda Bravim; Jimmy Soares; Tassia Nati; James R. Broach; António Fernandes; Patricia Machado Bueno Fernandes

Methods In this study we performed a microarray analysis in a distillery Saccharomyces cerevisiae strain (BT0510) submitted to sublethal pressure treatment of 50 MPa for 30 min at room temperature, followed by incubation for 5, 10 and 15 min at room pressure (0.1 MPa). The transcription of the genes involved in central carbon metabolism in response to HHP was investigated for bioinformatics tools.


BMC Proceedings | 2014

Effect of high hydrostatic pressure on the biosynthesis of sulfur amino acids in Saccharomyces cerevisiae

Jimmy Soares; Fernanda Bravim; Tassia Nati; Mainã Mantovanelli Mota; James R. Broach; António Fernandes; Patricia Machado Bueno Fernandes

High hydrostatic pressure (HHP) is successfully applied in several industrial segments, as in vaccine production and food conservation. The response of microorganisms to HHP treatment resemble the responses of other stresses with industrial relevance, like osmotic, temperature and ethanol, which make the HHP a valuable tool in biotechnology research, as in the ethanol production [1]. Amino acids play a key role in central metabolism besides being the building blocks of proteins, and they are important to the HHP stress response. In this study, the Saccharomyces cerevisiae BT0510 was exposed to 50 MPa for 30 min at room temperature, followed by incubation at room pressure with aeration for 15 min. Samples of total RNA were collected every 5 min for transcriptional analysis by DNA microarray technique. Bioinformatics analysis demonstrated the upregulation (≥ 2 fold) by HHP treatment of genes related to the sulfur amino acids synthesis, methionine and cysteine. The HHP treatment induced the genes MET3, MET10, MET14 and MET16, which are correlated with the conversion of intracellular sulfate in sulfide. MET2, related to the conversion of homoserine to O-acetylhomoserine, was also induced by HHP, as well as the gene that codes for Met17p, responsible for the incorporation of sulfide in O-acetylhomoserine to form homocysteine, that will be directed to methionine or cysteine synthesis. These amino acids are directly correlated with sulfur assimilation in yeast cells. Methionine is the S-adenosylmethionine precursor, which participates in the biosynthesis of lipids and polyamines, and is also involved in methylation reactions, being a methyl group donor [2,3]. Cysteine is part of iron-sulfur proteins and is the glutathione biosynthesis precursor. Glutathione maintain the redox state in cytoplasm, therefore, playing an important role in cell response to oxidative stress [2,3]. The key gene related to the biosynthesis of methionine (MET6) was upregulated by HHP, while the gene related to the biosynthesis of cysteine (CYS4) was unaffected. Five minutes after pressure release MET6 was repressed. The genes related to the conversion of methionine to S-adenosylmethionine, SAM1 and SAM2, were downregulated. Methionine residues are important against reactive oxygen species (ROS) [4], and genes associated with the reduction of methionine sulfoxide (MXR1 and MXR2) were induced by HHP treatment, suggesting that methionine plays an important role in the reduction of ROS resulting from stress caused by HHP [5]. Concerning the regulation of sulfur amino acids metabolism, MET28 was strongly induced during the entire HHP and post treatment. Other factors, such as the transcription factor encoded by MET4 were not affected by HHP, and also MET30 that negatively regulates Met4p. Met28p appears to play an important role in the biosynthesis of sulfur amino acids in response to HHP. It seems that this protein participates in the Met4 complexes-DNA stabilization. Methionine biosynthesis upregulation is not related to other stresses, such as heat and osmotic stresses, and appears to be specific to HHP, which reinforces the use of this treatment to study the stress response in microorganisms.


BMC Proceedings | 2014

Monitoring expression of yeast cell wall protein-encoding genes in response to high hydrostatic pressure

Tassia Nati; Fernanda Bravim; Jimmy Soares; Mainã Mantovanelli Mota; James R. Broach; António Fernandes; Patricia Machado Bueno Fernandes

Background The cell wall (CW) is one of the most important structures of the yeast cell, accounting for up to 30% of its dry weight. This organelle determines cellular morphology, affords mechanical protection and provides osmotic support. The yeast CW is a dynamic structure susceptible to many modifications, adjusting its composition and thickness to environmental changes. These responses usually involve changes in gene expression, increasing levels of proteins that have protective functions. High hydrostatic pressure (HHP) is a useful model of stress, which causes CW compression [1]. Exploring this process using the model organism Saccharomyces cerevisiae may allow us to understand the mechanisms of yeast stress tolerance in biotechnological processes and it may also helps in searching for effective antifungal drugs, since the CW is a desirable target of action.


Applied Microbiology and Biotechnology | 2013

High hydrostatic pressure activates gene expression that leads to ethanol production enhancement in a Saccharomyces cerevisiae distillery strain

Fernanda Bravim; Soyeon I. Lippman; Lucas F. da Silva; Diego T. Souza; A. Alberto R. Fernandes; Claudio A. Masuda; James R. Broach; Patricia Machado Bueno Fernandes


Archive | 2018

Biotecnologia branca para um mundo verde

Patricia Machado Bueno Fernandes; Alexandre Martins Costa Santos; A. Alberto R. Fernandes; Deise Maria Fontana Capalbo; Bárbara Juliana Pinheiro Borges; Fernanda Bravim; Georg Hubmann; Johan M. Thevelein; Luiza Adami Monteiro de Castro; Marcos Eduardo Pizetta Palomino; Maria Remedios Foulquié Moreno; Michihito Deguchi; Maurício Alexander de Moura Ferreira; Monica Montero Lomeli; Oeber de Freitas Quadros; Paulo Barroso; Ronaldo Biondo; Silas P. Rodrigues; Steve Swinnen

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Patricia Machado Bueno Fernandes

Universidade Federal do Espírito Santo

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A. Alberto R. Fernandes

Universidade Federal do Espírito Santo

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James R. Broach

Pennsylvania State University

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António Fernandes

Universidade Federal do Espírito Santo

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Mainã Mantovanelli Mota

Universidade Federal do Espírito Santo

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Tassia Nati

Universidade Federal do Espírito Santo

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Jimmy Soares

Universidade Federal do Espírito Santo

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Diego T. Souza

Universidade Federal do Espírito Santo

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Jéssica M. de Freitas

Universidade Federal do Espírito Santo

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Lucas F. da Silva

Universidade Federal do Espírito Santo

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