Fernando A. Perini

Response to comment on "The placental mammal ancestor and the post-K-Pg radiation of placentals".

Tree-building with diverse data maximizes explanatory power. Application of molecular clock models to ancient speciation events risks a bias against detection of fast radiations subsequent to the Cretaceous-Paleogene (K-Pg) event. Contrary to Springer et al., post–K-Pg placental diversification does not require “virus-like” substitution rates. Even constraining clade ages to their model, the explosive model best explains placental evolution.

Quaternary Bats from the Impossível-Ioiô Cave System (Chapada Diamantina, Brazil): Humeral Remains and the First Fossil Record of Noctilio leporinus (Chiroptera, Noctilionidae) from South America

ABSTRACT The partially submerged Impossível-Ioiô cave system located in the karst region of Chapada Diamantina in Bahia (Brazil) has recently been the target of extensive paleontological studies. Here we provide the first report of fossil bats from this cave system, in which we recognize six species based on humeral remains: Furipterus horrens, Chrotopterus auritus, Mormoops cf. megalophylla, Pteronotus gymnonotus, Pteronotus parnellii, and Noctilio leporinus. Morphology of the humerus of these taxa is described in a comparative framework to document taxonomic assessments and provide a basis for future studies of fossil bat faunas. The relevance of the new records reported here is evaluated at a broader continental scale, as well as in contrast with the recent bat fauna of the region. The record of Noctilio leporinus stands as the first fossil occurrence of this species on the South American continent.

Phylogenetic Systematics of Peccaries (Tayassuidae: Artiodactyla) and a Classification of South American Tayassuids

Tayassuidae is a family of pig-like Artiodactyla restricted to the New World. Despite its rich fossil history, they have received less attention from a taxonomic and phylogenetic perspective when compared to the Old World pigs, Suidae. In this study, we performed a computer assisted phylogenetic analysis using morphological and molecular data including fossil and extant Tayassuidae, using parsimony and Bayesian approaches. We recovered the monophyly of the family Tayassuidae, confirming previous proposals, as well as the monophyly of the subfamilies Hesperhyinae and Tayassuinae, and the genus Platygonus, which we placed in a new taxon of tribe level. The three living peccaries and a number of fossil species belong to a new, tribe level, monophyletic group. The genus Catagonus comes out as paraphyletic, leading us to propose to restrict the generic name to the type species, C. metropolitanus, and a new taxonomic arrangement for the remaining species previously included in it, revalidating the genera Brasiliochoerus and Parachoerus, and describing a new genus, Protherohyus, gen. nov.

Fossil peccaries of Late Pleistocene/Holocene (Cetartiodactyla, Tayassuidae) from underwater caves of Serra da Bodoquena (Mato Grosso do Sul State, Brazil)

Abstract New records of Catagonus stenocephalus and Tayassu pecari are reported from the karst of Serra da Bodoquena, located at a south-western portion of Brazil near the border with Paraguay. Skull and lower jaw fragments at different stages of mineralisation were retrieved from two limestone underwater caves, Japonês and Nascente do Formoso, associated with clay and sand deposits with no retrievable stratigraphy. C14 dating of fossil mammals from these caves was attempted, but so far no success was achieved, but the inferred age for the associated paleofauna of these caves is Late Pleistocene and Holocene. The morphology of these fossil peccaries, from the most south-western known population in Brazil, is detailed and paleoecological implications are considered.

On the identity of Didelphis marsupialis Linnaeus 1758

Abstract Given the confusion ensuing from a recent study suggesting that the name Didelphis marsupialis should be applied to white-eared opossums instead of the traditional view that it represents a black-eared opossum, we reviewed all the sources employed by Linnaeus to describe D. marsupialis and examined photographs of the putative type specimen, comparing them with specimens of black- and white-eared Didelphis. We conclude that the type specimen presents characters that would allow us to diagnose it as a black-eared opossum species. We believe that the proposed nomenclatural changes not only are unjustified but also disrupt the stability advocated by the International Commission on Zoological Nomenclature (ICZN).

Biogeographic scenarios for the diversification of a widespread Neotropical species, Glossophaga soricina (Chiroptera: Phyllostomidae)

In order to contribute to the understanding of the effect of geological and climatic changes on species diversification in the Neotropics, we employed molecular techniques to study the population dynamics of the glossophagine bat Glossophaga soricina, a widespread species in the Neotropical region. We aimed to assess the dispersal and distribution of mtDNA lineages of G. soricina and evaluate the possible effect of vicariant events in the population history and dynamics. Glossophaga soricina presented two main highly supported mtDNA lineages, which diverged between ∼2.4 and 5 million years ago, probably following a vicariant event caused by the Andes final uplift. The lower sea level during Pleistocene glaciations also made possible the occupation of Jamaica after an event of dispersion over the Caribbean Sea, although past climatic fluctuations had little effect over population dynamics of G. soricina. Our results corroborate the idea that the Andes uplift played an important role in the evolution of Neotropical biodiversity. In this context we suggest that geographic events causing large scale environmental disjunction, such as the uplift of mountains, are more likely to restrict gene flow amongst populations of tolerant species with broad geographic range than local climate driven environmental changes.

Morphology of the tongue of Vermilingua (Xenarthra: Pilosa) and evolutionary considerations

The tongue of anteaters (Xenarthra, Pilosa, Vermilingua) is a highly specialized for myrmecophagy. Here, we describe the topography and histology of the tongue, and compare it to that of other xenarthrans and other myrmecophagous eutherian mammals. The tongue of Vermilingua is long and slender, with an apical protuberance, which differs between Myrmecophagidae and Cyclopes didactylus. In the former, the rostral region is conical, and in the latter, it is dorsoventrally compressed, as observed in sloths. The tongue of Vermilingua has filiform and circumvallate papillae on the surface; foliate and fungiform papillae are absent. The filiform papillae of Myrmecophaga tridactyla are simple all over the tongue, differing from Tamandua tetradactyla and Cyclopes didactylus, which present composed filiform papillae in the rostral and middle regions. Histologically, the tongue has a peculiar organization of muscular and neurovascular tissues, differing from the usual mammalian pattern. However, the tongue structure is less divergent in Cyclopes. The presence of two circumvallate papillae is common to the three major clades of Xenarthra (Cingulata, Folivora and Vermilingua). In each group, the tongue may reflect functional features related to myrmecophagous (anteaters and some armadillos), omnivorous (remaining armadillos) and folivorous (sloths) feeding habits. The similarities between the tongues of Vermiligua and other non‐xenarthran eutherian myrmecophagous mammals are somewhat general and, under close inspection, superficial, being an example of different lineages achieving the same morphofunctional adaptations through distinct evolutionary pathways.

The evolution of hyoid apparatus in Xenarthra (Mammalia: Eutheria)

Abstract The hyoid apparatus reflects aspects of the form and function of feeding in living and extinct organisms and, despite the availability of information about this structure for Xenarthra, it remains little explored from an evolutionary perspective. Here we compare the morphology of the hyoid apparatus in xenarthrans, describing its general morphology and variation in each major clade and score these variations as phylogenetic characters, which were submitted to ancestral states reconstructions. The general hyoid morphology of Xenarthra consists of a v-bone (basihyal fused with the thyrohyals) and three paired bones (stylohyal, epihyal and ceratohyal), which are unfused in the majority of taxa. The clade-specific morphology observed here, allowed us to obtain additional synapomorphies for all major clades of Xenarthra (Cingulata, Pilosa, Folivora and Vermilingua), for Glyptodontididae, and for Nothrotheriidae. The fusion of hyoid elements are convergentelly achieved among the diphyletic extant tree sloths, some extinct ground sloths and glyptodontids. Despite the heavy influence of adaptive evolution related to feeding habits, the morphology of the hyoid apparatus proved to be a valuable source of phylogenetic information.

Diversity, morphological phylogeny, and distribution of bats of the genus Molossus E. Geoffroy, 1805 (Chiroptera, Molossidae) in Brazil

ABSTRACT Tenuous descriptions of many species and subspecies of mastiff bats make the taxonomy of Molossus E. Geoffroy, 1805 confusing and unstable. Molossus is one of the most diverse genera of free tailed bats in the pantropical family Molossidae Gervais, 1856. Given their impressive variation due to geography, sex, and ontogeny, and incomplete knowledge about species boundaries, a comprehensive taxonomic revision of the genus is needed. In addition, the level of genetic divergence, even among morphologically well-characterized species is low, often making diagnosis of groups difficult and likely resulting in an underestimation of the number of species. Brazil has a wide territory harboring many different physiognomies, but with no study focusing on the morphological variation and taxonomy of Molossus available. Therefore, we have analyzed qualitative and quantitative characters from 493 specimens belonging to nine species of Molossus, and conducted a wide comparative morphological analysis of the species occurring in Brazil. In addition, we propose a hypothesis of phylogenetic relationships within Molossus based on morphology, establishing the morphological characters for diagnosis and identification of species, and update the geographic distribution of Molossus species in Brazil, with range extensions for four taxa. Six species, Molossus rufus E. Geoffroy, 1805, Molossus molossus (Pallas, 1776), Molossus coibensis Allen, 1904, Molossus aztecus Saussure, 1860, Molossus currentium Thomas, 1901, and Molossus pretiosus Miller, 1902 occur in Brazil. We bring support for the synonymy of Molossus bondae Allen, 1904 with M. currentium, as suggested by several authors.

Brazilian legislation on genetic heritage harms Biodiversity Convention goals and threatens basic biology research and education.

Beginning in November 2018, Brazilian legislation regulating access to genetic heritage and associated traditional knowledge will cause a bureaucratic collapse of Biodiversity research in Brazil. Law number 13.123/2015 and Decree 8772/2016 impose severe barriers to basic and applied research, and to international cooperation by introducing mandatory registry of research access to native organisms in Brazil. This legal framework was meant to improve governmental control over systems of biotechnology research using genetic material and associated chemical compounds, which are central points of the Nagoya Protocol (CBD 2011) and the Convention on Biological Diversity (CBD 1992, 2012). However, the requirements imposed by the mandatory registry of research in the new National System for Governance of Genetic Heritage and Associated Traditional Knowledge (SisGen), the system of Material Transfer Agreements (MTAs), and the need to record access to organismal data prior to publication of scientific results or exportation of specimens for scientific research are technically impracticable and not part of the Nagoya Protocol or CBD ..