Frances Westall

Early Archean fossil bacteria and biofilms in hydrothermally-influenced sediments from the Barberton greenstone belt, South Africa

Abstract SEM imaging of HF-etched, 3.3–3.5 Ga cherts from the Onverwacht Group, South Africa reveals small spherical (1 μm diameter) and rod-shaped structures (2–3.8 μm in length) which are interpreted as probable fossil coccoid and bacillar bacteria (prokaryotes), respectively, preserved by mineral replacement. Other, possibly biogenic structures include smaller rod-shaped bacteriomorphs ( 900 m), textures in the sediments in which these biogenic structures occur suggest that they were probably deposited in a shallow water environment which was subjected to intermittent subaerial exposure. Pervasive hydrothermal activity is evidenced by oxygen isotope studies as well as the penecontemporaneous silicification of all rock types by low temperature (⩽220°C) hydrothermal solutions.

Implications of a 3.472–3.333 Gyr-old subaerial microbial mat from the Barberton greenstone belt, South Africa for the UV environmental conditions on the early Earth

Modelling suggests that the UV radiation environment of the early Earth, with DNA weighted irradiances of about three orders of magnitude greater than those at present, was hostile to life forms at the surface, unless they lived in specific protected habitats. However, we present empirical evidence that challenges this commonly held view. We describe a well-developed microbial mat that formed on the surface of volcanic littoral sediments in an evaporitic environment in a 3.5–3.3 Ga-old formation from the Barberton greenstone belt. Using a multiscale, multidisciplinary approach designed to strongly test the biogenicity of potential microbial structures, we show that the mat was constructed under flowing water by 0.25 μm filaments that produced copious quantities of extracellular polymeric substances, representing probably anoxygenic photosynthesizers. Associated with the mat is a small colony of rods–vibroids that probably represent sulphur-reducing bacteria. An embedded suite of evaporite minerals and desiccation cracks in the surface of the mat demonstrates that it was periodically exposed to the air in an evaporitic environment. We conclude that DNA-damaging UV radiation fluxes at the surface of the Earth at this period must either have been low (absorbed by CO2, H2O, a thin organic haze from photo-dissociated CH4, or SO2 from volcanic outgassing; scattered by volcanic, and periodically, meteorite dust, as well as by the upper layers of the microbial mat) and/or that the micro-organisms exhibited efficient gene repair/survival strategies.

The nature of fossil bacteria: A guide to the search for extraterrestrial life

In an attempt to establish reliable criteria for the identification of potential fossil life in extraterrestrial materials, the fossilizable characteristics of bacteria, namely, size, shape, cell wall texture, association, and colony formation, are described, and an overview is given of the ways in which fossil bacteria are preserved (as compressions in fine-grained sediments; preservation in amber; permineralized by silica; replacement by minerals such as silica, pyrite, Fe/Mn oxides, calcite, phosphate, and siderite; or as molds in minerals). The problem of confounding minerally replaced bacteria with non biological structures having a bacterial morphology is addressed. Examples of fossilized bacteria from the Early Archaean through to the Recent are used to illustrate the various modes of preservation and the morphology of fossil bacteria.

The simulated silicification of bacteria--new clues to the modes and timing of bacterial preservation and implications for the search for extraterrestrial microfossils.

Evidence of microbial life on Earth has been found in siliceous rock formations throughout the geological and fossil record. To understand the mechanisms of silicification and thus improve our search patterns for evidence of fossil microbial life in rocks, a series of controlled laboratory experiments were designed to simulate the silicification of microorganisms. The bacterial strains Pseudomonas fluorescens and Desulphovibrio indonensis were exposed to silicifying media. The experiments were designed to determine how exposure time to silicifying solutions and to silicifying solutions of different Si concentration affect the fossilization of microbial biofilms. The silicified biofilms were analyzed using transmission electron microscopy (TEM) in combination with energy-dispersive spectroscopy. Both bacterial species showed evidence of silicification after 24 h in 1,000 ppm silica solution, although D. indonensis was less prone to silicification. The degree of silicification of individual cells of the same sample varied, though such variations decreased with increasing exposure time. High Si concentration resulted in better preservation of cellular detail; the Si concentration was more important than the duration in Si solution. Even though no evidence of amorphous silica precipitation was observed, bacterial cells became permineralized. High-resolution TEM analysis revealed nanometer-sized crystallites characterized by lattice fringe-spacings that match the (10-11) d-spacing of quartz formed within bacterial cell walls after 1 week in 5,000 ppm silica solution. The mechanisms of silicification under controlled laboratory conditions and the implication for silicification in natural environments are discussed, along with the relevance of our findings in the search for early life on Earth and extraterrestrial life.

Polymeric substances and biofilms as biomarkers in terrestrial materials: Implications for extraterrestrial samples

Organic polymeric substances are a fundamental component of microbial biofilms. Microorganisms, especially bacteria, secrete extracellular polymeric substances (EPS) to form slime layers in which they reproduce. In the sedimentary environment, biofilms commonly contain the products of degraded bacteria as well as allochthonous and autochthonous mineral components. They are complex structures which serve as protection for the colonies of microorganisms living in them and also act as nutrient traps. Biofilms are almost ubiquitous wherever there is an interface and moisture (liquid/liquid, liquid/solid, liquid/gas, solid/gas). In sedimentary rocks they are commonly recognized as stromatolites. We also discuss the distinction between bacterial biofilms and prebiotic films. The EPS and cell components of the microbial biofilms contain many cation chelation sites which are implicated in the mineralization of the films. EPS, biofilms, and their related components thus have strong preservation potential in the rock record. Fossilized microbial polymeric substances (FPS) and biofilms appear to retain the same morphological characteristics as the unfossilized material and have been recognized in rock formations dating back to the Early Archaean (3.5 b.y.). We describe FPS and biofilms from hot spring, deep-sea, volcanic lake, and shallow marine/littoral environments ranging up to 3.5 b.y. in age. FPS and biofilms are more commonly observed than fossil bacteria themselves, especially in the older part of the terrestrial record. The widespread distribution of microbial biofilms and their great survival potential makes their fossilized remains a useful biomarker as a proxy for life with obvious application to the search for life in extraterrestrial materials.

Diagenesis and clay mineral formation at Gale Crater, Mars

The Mars Science Laboratory rover Curiosity found host rocks of basaltic composition and alteration assemblages containing clay minerals at Yellowknife Bay, Gale Crater. On the basis of the observed host rock and alteration minerals, we present results of equilibrium thermochemical modeling of the Sheepbed mudstones of Yellowknife Bay in order to constrain the formation conditions of its secondary mineral assemblage. Building on conclusions from sedimentary observations by the Mars Science Laboratory team, we assume diagenetic, in situ alteration. The modeling shows that the mineral assemblage formed by the reaction of a CO2-poor and oxidizing, dilute aqueous solution (Gale Portage Water) in an open system with the Fe-rich basaltic-composition sedimentary rocks at 10–50°C and water/rock ratio (mass of rock reacted with the starting fluid) of 100–1000, pH of ∽7.5–12. Model alteration assemblages predominantly contain phyllosilicates (Fe-smectite, chlorite), the bulk composition of a mixture of which is close to that of saponite inferred from Chemistry and Mineralogy data and to that of saponite observed in the nakhlite Martian meteorites and terrestrial analogues. To match the observed clay mineral chemistry, inhomogeneous dissolution dominated by the amorphous phase and olivine is required. We therefore deduce a dissolving composition of approximately 70% amorphous material, with 20% olivine, and 10% whole rock component.

Exogenous carbonaceous microstructures in Early Archaean cherts and BIFs from the Isua Greenstone Belt: implications for the search for life in ancient rocks

Abstract The microstructure of HF-etched samples of Early Archaean banded iron formations (BIFs) and cherts from the >3.7 b.y.-old Isua Greenstone Belt (southwestern Greenland) was investigated using high resolution scanning electron microscopy equipped with an electron diffraction system, capable of analysing light elements. The rocks contain both endogenous (of internal origin) and exogenous (of external origin) carbonaceous microstructures. The former consist of inclusions of graphite and, possibly, small, amorphous carbonaceous particles, both embedded in metacherts (however, further in situ TEM studies are needed to verify the endogeneity of the amorphous particles). Moreover, these rocks also contain endolithic microorganisms (i.e. inhabiting cracks in rocks), as well as undifferentiated carbonaceous matter, that occur in fractures and cracks between grains. The microorganisms include cyanobacteria, filamentous microorganisms such as fungal hyphae and possibly bacteria, as well as large, unidentified cells or spores. Most of the microorganisms appear to have been fossilised. The endoliths are evidently younger than the host rock, but must have infiltrated at different periods, most likely after the Inland Ice retreated (∼8000 years ago). The presence of endolithic carbonaceous matter in cracks and microfissures in these rocks will affect any analyses of bulk samples, such as carbon isotopes and chemical biomarkers, as well as analyses of acid-macerated residues. Thus, previous isotope measurements made on BIFs and cherts from Isua may reflect younger contamination rather than an endogenous (original) signal. Likewise, some of the previously described Isuan microorganisms probably represent recent, endolithic contamination.

Darwin - A Mission to Detect and Search for Life on Extrasolar Planets

The discovery of extrasolar planets is one of the greatest achievements of modern astronomy. The detection of planets that vary widely in mass demonstrates that extrasolar planets of low mass exist. In this paper, we describe a mission, called Darwin, whose primary goal is the search for, and characterization of, terrestrial extrasolar planets and the search for life. Accomplishing the mission objectives will require collaborative science across disciplines, including astrophysics, planetary sciences, chemistry, and microbiology. Darwin is designed to detect rocky planets similar to Earth and perform spectroscopic analysis at mid-infrared wavelengths (6-20 mum), where an advantageous contrast ratio between star and planet occurs. The baseline mission is projected to last 5 years and consists of approximately 200 individual target stars. Among these, 25-50 planetary systems can be studied spectroscopically, which will include the search for gases such as CO(2), H(2)O, CH(4), and O(3). Many of the key technologies required for the construction of Darwin have already been demonstrated, and the remainder are estimated to be mature in the near future. Darwin is a mission that will ignite intense interest in both the research community and the wider public.

Life on Mars: evaluation of the evidence within Martian meteorites ALH84001, Nakhla, and Shergotty

Abstract Analyses both support and are in opposition to the hypothesis that the Martian meteorite ALH84001 contains evidence for possible biogenic activity on Mars. New observations in two additional Martian meteorites, Nakhla (1.3 Ga old) and Shergotty (300–165 Ma old) indicate possible biogenic features. Features in the three Martian meteorites compare favorably with the accepted criteria for terrestrial microfossils and evidence for early life on the Earth. There is strong evidence for the presence of indigenous reduced carbon, biogenic magnetite, and the low-temperature formation of carbonate globules. The morphological similarities between terrestrial microfossils, biofilms, and the features found in the three Martian meteorites are intriguing but have not been conclusively proven. Every investigation must recognize the possibility of terrestrial contamination of the meteorites, whether or not the meteorites are Martian. The search for evidence of ancient life in Martian meteorites has emphasized the difficulties confronting the scientific community with the respect to the positive identification of evidence of past biogenic activity.

Multiplication of microbes below 0.690 water activity : implications for terrestrial and extraterrestrial life

Since a key requirement of known life forms is available water (water activity; aw ), recent searches for signatures of past life in terrestrial and extraterrestrial environments have targeted places known to have contained significant quantities of biologically available water. However, early life on Earth inhabited high-salt environments, suggesting an ability to withstand low water-activity. The lower limit of water activity that enables cell division appears to be ∼ 0.605 which, until now, was only known to be exhibited by a single eukaryote, the sugar-tolerant, fungal xerophile Xeromyces bisporus. The first forms of life on Earth were, though, prokaryotic. Recent evidence now indicates that some halophilic Archaea and Bacteria have water-activity limits more or less equal to those of X. bisporus. We discuss water activity in relation to the limits of Earths present-day biosphere; the possibility of microbial multiplication by utilizing water from thin, aqueous films or non-liquid sources; whether prokaryotes were the first organisms able to multiply close to the 0.605-aw limit; and whether extraterrestrial aqueous milieux of ≥ 0.605 aw can resemble fertile microbial habitats found on Earth.