Françoise Lescourret

Carbon allocation in fruit trees: from theory to modelling

Carbon allocation within a plant depends on complex rules linking source organs (mainly shoots) and sink organs (mainly roots and fruits). The complexity of these rules comes from both regulations and interactions between various plant processes involving carbon. This paper presents these regulations and interactions, and analyses how agricultural management can influence them. Ecophysiological models of carbon production and allocation are good tools for such analyses. The fundamental bases of these models are first presented, focusing on their underlying processes and concepts. Different approaches are used for modelling carbon economy. They are classified as empirical, teleonomic, driven by source–sink relationships, or based on transport and chemical/biochemical conversion concepts. These four approaches are presented with a particular emphasis on the regulations and interactions between organs and between processes. The role of plant architecture in carbon partitioning is also discussed and the interest of coupling plant architecture models with carbon allocation models is highlighted. As an illustration of carbon allocation models, a model developed for peach trees, describing carbon transfer within the plant, and based on source–sink and Münch transport theory is presented and used for analyzing the link between roots, shoots and reproductive compartments. On this basis, the consequences of fruit load or plant pruning on fruit and vegetative growth can be evaluated.

A simulation model of growth at the shoot-bearing fruit level: I. Description and parameterization for peach

Abstract A simulation model of daily C assimilation and allocation in an isolated shoot-bearing fruit is presented. The system is divided into three compartments: fruits, one-year-old stem, and leafy shoots. The pool of C assimilates available daily for distribution is the daily assimilation of C, plus that mobilized from reserves if the demand of sink organs exceeds the product of photosynthesis. Equations of leaf photosynthesis incorporate a feedback inhibition through the leaf storage reserves, and the effect of light extinction caused by foliage. Carbon assimilation of fruits is considered. The mobilization of reserves first concerns the leafy shoot, and then the one-year-old stem to a lesser extent. The model simulates carbon partitioning based on organ demands and priority rules. Maintenance respiration costs, which are calculated on the basis of the Q 10 concept, have first priority. Vegetative and reproductive growth are given second and third priority. Daily carbon demands for the vegetative and reproductive organs are based on an analytical formulation of the potential growth rate at any time. The accumulation or replenishing of reserves, first in the leafy shoot compartment and then, in the case of saturation, in the one-year-old stem compartment, is given last priority. A parameterization of the model is presented for peach, with several values for cultivar-dependent and location-dependent parameters (two cultivars and locations considered). The input data required by the model are described. Finally, some simulations concerning a sensitivity analysis are presented to illustrate the model behaviour.

Environmental factors associated with lameness in dairy cattle

An epidemiological survey of the incidence of different foot diseases causing lameness was undertaken on 80 French dairy farms between 1979 and 1980. A total of 29.5 cases of lesions per 100 cows was recorded in that period, which represents a higher incidence that of clinical mastitis (20.37). Data concerning the incidence of foot lesions, farm structures, herd management system, feeding and soil characteristics were analysed using the ξ2 test of independence and one-way analysis of variance. Results showed that a high incidence of infectious and metabolic foot disorders was associated with loose housing, feeding based on maize silage, absence of a footbath, foot trimming and mineral supplementation. A relationship was also observed between articular lesions and grass-silage feeding. Tied-housed cows fed hay were less affected. Regular hoof trimming at pasture and a long time spent checking the animals were found to have a positive effect on foot health. A low incidence of foot disorders was also associated with a larger variety in dietary components. A high incidence of lameness was reported in large herds kept on rough floors.

Multiple cropping systems as drivers for providing multiple ecosystem services: from concepts to design

Provisioning services, such as the production of food, feed, and fiber, have always been the main focus of agriculture. Since the 1950s, intensive cropping systems based on the cultivation of a single crop or a single cultivar, in simplified rotations or monocultures, and relying on extensive use of agrochemical inputs have been preferred to more diverse, self-sustaining cropping systems, regardless of the environmental consequences. However, there is increasing evidence that such intensive agroecosystems have led to a decline in biodiversity as well as threatening the environment and have damaged a number of ecosystem services such as the biogeochemical nutrient cycles and the regulation of climate and water quality. Consequently, the current challenge facing agriculture is to ensure the future of food production while reducing the use of inputs and limiting environmental impacts and the loss of biodiversity. Here, we review examples of multiple cropping systems that aim to use biotic interactions to reduce chemical inputs and provide more ecosystem services than just provisioning. Our main findings are the identification of underlying ecological processes and management strategies related to the provision of pairs of ecosystem services namely food production and a regulation service. We also found gaps between ecological knowledge and the constraints of agricultural practices in taking account of the interactions and possible trade-offs between multiple ecosystem services as well as socioeconomic constraints. We present guidelines for the design of multiple cropping systems combining ecological, agricultural, and genetic concepts and approaches.

Radiotelemetry unravels movements of a walking insect species in heterogeneous environments.

The study of movements of individual organisms in heterogeneous environments is of primary importance for understanding the effect of habitat composition on population patterns. We developed a new experimental methodology to measure individual movements of walking insects, based on radiotracking. Our aims were to understand the link between habitat heterogeneity and moving patterns, and to characterize the movements with dynamic models of diffusion. We tracked individual movements of adults of Cosmopolites sordidus (Coleoptera: Curculionidae) with passive radio frequency identification (RFID) tags under different field management practices. Diffusion models based on recapture data indicated a subdiffusive movement of this species. Substantial variation was found between individual paths, but this variation was not sex dependent. Movement of released C. sordidus was affected by banana planting pattern and the presence/absence of crop residues but not by the presence of a cover crop between rows of bananas or by banana variety. These results show that the RFID technology is useful for evaluating the dispersal parameters of cryptic insects in heterogeneous environments.

Cover cropping alters the diet of arthropods in a banana plantation: a metabarcoding approach.

Plant diversification using cover crops may promote natural regulation of agricultural pests by supporting alternative prey that enable the increase of arthropod predator densities. However, the changes in the specific composition of predator diet induced by cover cropping are poorly understood. Here, we hypothesized that the cover crop can significantly alter the diet of predators in agroecosystems. The cover crop Brachiaria decumbens is increasingly used in banana plantations to control weeds and improve physical soil properties. In this paper, we used a DNA metabarcoding approach for the molecular analysis of the gut contents of predators (based on mini-COI) to identify 1) the DNA sequences of their prey, 2) the predators of Cosmopolites sordidus (a major pest of banana crops), and 3) the difference in the specific composition of predator diets between a bare soil plot (BSP) and a cover cropped plot (CCP) in a banana plantation. The earwig Euborellia caraibea, the carpenter ant Camponotus sexguttatus, and the fire ant Solenopsis geminata were found to contain C. sordidus DNA at frequencies ranging from 1 to 7%. While the frequencies of predators positive for C. sordidus DNA did not significantly differ between BSP and CCP, the frequency at which E. caraibea was positive for Diptera was 26% in BSP and 80% in CCP; the frequency at which C. sexguttatus was positive for Jalysus spinosus was 14% in BSP and 0% in CCP; and the frequency at which S. geminata was positive for Polytus mellerborgi was 21% in BSP and 3% in CCP. E. caraibea, C. sexguttatus and S. geminata were identified as possible biological agents for the regulation of C. sordidus. The detection of the diet changes of these predators when a cover crop is planted indicates the possible negative effects on pest regulation if predators switch to forage on alternative prey.

How does winter pruning affect peach tree–Myzus persicae interactions?

Winter tree pruning is a cultural practice known to modify vegetative growth, which is likely to affect the development of pests. However, it has been poorly addressed as a cultural control method for diminishing the population levels of the green peach aphid, Myzus persicae (Sulzer) (Homoptera: Aphididae), in peach [Prunus persica (L.) Batsch (Rosaceae)] orchards. In this study, we conducted a 2‐year, on‐station experiment to evaluate how winter pruning affects peach–M. persicae interactions, by examining tree vegetative growth, aphid population dynamics, and crop yield and fruit quality. We collected data under an insect‐proof shelter on adult peach trees submitted to various levels of pruning and artificially infested with aphids. Our results showed that pruning enhanced shoot growth due to the proportion of growing shoots, which increased exponentially (10–60%), whereas the growth rate of growing shoots was not affected. The degree of infestation of peach trees increased with increasing pruning intensity. This effect was mainly due to the increase of the proportion of growing shoots, on which aphids developed better than on rosettes. In turn, the higher the aphid infestation, the higher the aphid‐induced shoot‐tip damage, leaf curling, and leaf fall that disturbed the growth of growing shoots. However, aphids did not considerably reduce fruit quality at harvest. They did not affect fresh fruit weight, and the refractometric index (indicator of sugar content) was reduced by only 3–4%. The relevance of winter pruning as a cultural method for pest control in orchards conducted under integrated fruit production guidelines is discussed.

Modelling the effect of the stage of pregnancy on dairy cows' milk yield

The effect of pregnancy on milk yield was studied on a 601 lactation sample. One hundred and sixty-nine lactations of non-pregnant cows, managed under identical conditions, served as controls. Lactations were divided into five groups according to parity (primiparous or multiparous) and production potential (two ranks for primiparous cows, three ranks for multiparous cows). The difference between the individual milk yield of each pregnant animal, and the mean production of the corresponding controls was computed weekly from the week of conception. The reducing effect of pregnancy began to be measurable from the 20th week of pregnancy, regardless of the group studied or the week of conception. Analysing the amplitude of this effect restricted the investigation to the three following groups: (i) primiparous cows, (ii) low- and medium-producing multiparous cows, (iii) high-producing multiparous cows. The effect of pregnancy was lower in primiparous than in multiparous cows. In the latter, it was higher in high-producing cows, partly because of the greater calf weight. At the 29th pregnancy week, this effect reached -17middot;5, -2·4 and -3·6 kg/day in the three groups, respectively. In each of these three lactation groups, the following non-linear model Y = −e −a [(Pw~18)e −bpw ] was fitted, where Y is the difference between the milk yields of pregnant and non-pregnant cows at a given stage (week), Pw is the pregnancy week, and a and b are parameters. The overall milk yield losses over a complete lactation, as estimated from the integral of that equation, reached 89, 137 and 203 kg, respectively in the three groups.

Virtual profiling: a new way to analyse phenotypes

Simulation models can be used to perform virtual profiling in order to analyse eco-physiological processes controlling plant phenotype. To illustrate this, an eco-physiological model has been used to compare and contrast the status of a virtual fruit system under two situations of carbon supply. The model simulates fruit growth, accumulation of sugar, citric acid and water, transpiration, respiration and ethylene emission, and was successfully tested on peach (Prunus persica L. Batsch) for two leaf-to-fruit ratios (6 and 18 leaves per fruit). The development stage and the variation in leaf number had large effects of the fruit model variables dealing with growth, metabolism and fruit quality. A sensitivity analysis showed that changing a single parameter value, which could correspond to a genotypic change induced by a mutation, either strongly affects most of the processes, or affects a specific process or none. Correlation analysis showed that, in a complex system such as fruit, the intensity of many physiological processes and quality traits co-varies. It also showed unexpected co-variations resulting from emergent properties of the system. This virtual profiling approach opens a new route to explore the impact of mutations, or naturally occurring genetic variations, under differing environmental conditions.

Effects of different irrigation regimes applied during the final stage of rapid growth on an early maturing peach cultivar

Different irrigation regimes were performed on container-grown early-season peach trees (cv. Alexandra) during stage III of fruit growth. In the first experiment, three water treatments were applied: T1, control irrigation; T2, light water restriction; T3, high water restriction. In the second experiment, T4, a light water restriction, was compared to T5, the same total amount of water as T4 but with alternating periods of water withholding and subsequent re-irrigation. Compared to T1 and T2, leaf photosynthesis was limited under T3. Fruit yield and quality did not differ between T1 and T2, while fruit yield, average weight and percentage in the higher commercial grade decreased and total soluble solids (TSS) increased under T3, compared to T1 and T2. Comparing T5 to T4, yield, fruit firmness and average weight did not vary, but heterogeneousness of fruit diameter and TSS at the lower fruit grade tended to be higher. Peach sensitivity to brown rot was likely to decrease under T3 compared to T1 and T2. Peach water loss and brown rot incidence after contamination in conidial suspensions were enhanced under T5 compared to T4, implying that re-irrigation after water withholding should be avoided in order to limit brown rot incidence.