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Dive into the research topics where Frank Dankers is active.

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Featured researches published by Frank Dankers.


Radiotherapy and Oncology | 2015

Multivariable normal-tissue complication modeling of acute esophageal toxicity in advanced stage non-small cell lung cancer patients treated with intensity-modulated (chemo-)radiotherapy

Robin Wijsman; Frank Dankers; E.G.C. Troost; Aswin L. Hoffmann; Erik H.F.M. van der Heijden; Lioe-Fee de Geus-Oei; Johan Bussink

BACKGROUND AND PURPOSE The majority of normal-tissue complication probability (NTCP) models for acute esophageal toxicity (AET) in advanced stage non-small cell lung cancer (AS-NSCLC) patients treated with (chemo-)radiotherapy are based on three-dimensional conformal radiotherapy (3D-CRT). Due to distinct dosimetric characteristics of intensity-modulated radiation therapy (IMRT), 3D-CRT based models need revision. We established a multivariable NTCP model for AET in 149 AS-NSCLC patients undergoing IMRT. MATERIALS AND METHODS An established model selection procedure was used to develop an NTCP model for Grade ⩾2 AET (53 patients) including clinical and esophageal dose-volume histogram parameters. RESULTS The NTCP model predicted an increased risk of Grade ⩾2 AET in case of: concurrent chemoradiotherapy (CCR) [adjusted odds ratio (OR) 14.08, 95% confidence interval (CI) 4.70-42.19; p<0.001], increasing mean esophageal dose [Dmean; OR 1.12 per Gy increase, 95% CI 1.06-1.19; p<0.001], female patients (OR 3.33, 95% CI 1.36-8.17; p=0.008), and ⩾cT3 (OR 2.7, 95% CI 1.12-6.50; p=0.026). The AUC was 0.82 and the model showed good calibration. CONCLUSIONS A multivariable NTCP model including CCR, Dmean, clinical tumor stage and gender predicts Grade ⩾2 AET after IMRT for AS-NSCLC. Prior to clinical introduction, the model needs validation in an independent patient cohort.


Radiotherapy and Oncology | 2017

Comparison of toxicity and outcome in advanced stage non-small cell lung cancer patients treated with intensity-modulated (chemo-)radiotherapy using IMRT or VMAT

Robin Wijsman; Frank Dankers; E.G.C. Troost; Aswin L. Hoffmann; Erik H.F.M. van der Heijden; Lioe-Fee de Geus-Oei; Johan Bussink

Retrospective evaluation of 188 advanced stage non-small cell lung cancer patients treated with IMRT or VMAT revealed a limited increase of moderate to severe acute esophageal toxicity after VMAT. Acute pulmonary toxicity and severe late toxicity were low. Overall survival did not differ between the IMRT and VMAT groups.


Medical Physics | 2018

Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers

Timo M. Deist; Frank Dankers; Gilmer Valdes; Robin Wijsman; I-Chow Hsu; Cary Oberije; Tim Lustberg; Johan van Soest; Frank Hoebers; Arthur Jochems; Issam El Naqa; Leonard Wee; Olivier Morin; David R. Raleigh; Wouter T. C. Bots; Johannes H.A.M. Kaanders; J. Belderbos; Margriet Kwint; Timothy D. Solberg; René Monshouwer; Johan Bussink; Andre Dekker; Philippe Lambin

Purpose Machine learning classification algorithms (classifiers) for prediction of treatment response are becoming more popular in radiotherapy literature. General Machine learning literature provides evidence in favor of some classifier families (random forest, support vector machine, gradient boosting) in terms of classification performance. The purpose of this study is to compare such classifiers specifically for (chemo)radiotherapy datasets and to estimate their average discriminative performance for radiation treatment outcome prediction. Methods We collected 12 datasets (3496 patients) from prior studies on post‐(chemo)radiotherapy toxicity, survival, or tumor control with clinical, dosimetric, or blood biomarker features from multiple institutions and for different tumor sites, that is, (non‐)small‐cell lung cancer, head and neck cancer, and meningioma. Six common classification algorithms with built‐in feature selection (decision tree, random forest, neural network, support vector machine, elastic net logistic regression, LogitBoost) were applied on each dataset using the popular open‐source R package caret. The R code and documentation for the analysis are available online (https://github.com/timodeist/classifier_selection_code). All classifiers were run on each dataset in a 100‐repeated nested fivefold cross‐validation with hyperparameter tuning. Performance metrics (AUC, calibration slope and intercept, accuracy, Cohens kappa, and Brier score) were computed. We ranked classifiers by AUC to determine which classifier is likely to also perform well in future studies. We simulated the benefit for potential investigators to select a certain classifier for a new dataset based on our study (pre‐selection based on other datasets) or estimating the best classifier for a dataset (set‐specific selection based on information from the new dataset) compared with uninformed classifier selection (random selection). Results Random forest (best in 6/12 datasets) and elastic net logistic regression (best in 4/12 datasets) showed the overall best discrimination, but there was no single best classifier across datasets. Both classifiers had a median AUC rank of 2. Preselection and set‐specific selection yielded a significant average AUC improvement of 0.02 and 0.02 over random selection with an average AUC rank improvement of 0.42 and 0.66, respectively. Conclusion Random forest and elastic net logistic regression yield higher discriminative performance in (chemo)radiotherapy outcome and toxicity prediction than other studied classifiers. Thus, one of these two classifiers should be the first choice for investigators when building classification models or to benchmark ones own modeling results against. Our results also show that an informed preselection of classifiers based on existing datasets can improve discrimination over random selection.


Physics in Medicine and Biology | 2017

Esophageal wall dose-surface maps do not improve the predictive performance of a multivariable NTCP model for acute esophageal toxicity in advanced stage NSCLC patients treated with intensity-modulated (chemo-)radiotherapy

Frank Dankers; Robin Wijsman; E.G.C. Troost; René Monshouwer; Johan Bussink; Aswin L. Hoffmann

In our previous work, a multivariable normal-tissue complication probability (NTCP) model for acute esophageal toxicity (AET) Grade  ⩾2 after highly conformal (chemo-)radiotherapy for non-small cell lung cancer (NSCLC) was developed using multivariable logistic regression analysis incorporating clinical parameters and mean esophageal dose (MED). Since the esophagus is a tubular organ, spatial information of the esophageal wall dose distribution may be important in predicting AET. We investigated whether the incorporation of esophageal wall dose-surface data with spatial information improves the predictive power of our established NTCP model. For 149 NSCLC patients treated with highly conformal radiation therapy esophageal wall dose-surface histograms (DSHs) and polar dose-surface maps (DSMs) were generated. DSMs were used to generate new DSHs and dose-length-histograms that incorporate spatial information of the dose-surface distribution. From these histograms dose parameters were derived and univariate logistic regression analysis showed that they correlated significantly with AET. Following our previous work, new multivariable NTCP models were developed using the most significant dose histogram parameters based on univariate analysis (19 in total). However, the 19 new models incorporating esophageal wall dose-surface data with spatial information did not show improved predictive performance (area under the curve, AUC range 0.79-0.84) over the established multivariable NTCP model based on conventional dose-volume data (AUC  =  0.84). For prediction of AET, based on the proposed multivariable statistical approach, spatial information of the esophageal wall dose distribution is of no added value and it is sufficient to only consider MED as a predictive dosimetric parameter.


international conference of the ieee engineering in medicine and biology society | 2013

EEG source localization in full-term newborns with hypoxic-ischemia

Ward Jennekens; Frank Dankers; Paul Blijham; Pjm Pierre Cluitmans; Carola van Pul; Peter Andriessen

The aim of this study was to evaluate EEG source localization by standardized weighted low-resolution brain electromagnetic tomography (swLORETA) for monitoring of full-term newborns with hypoxic-ischemic encephalopathy, using a standard anatomic head model. Three representative examples of neonatal hypoxic-ischemia were included. The method was validated with MRI data. Hypoxic-ischemic areas, visible on MRI, correlated well with swLORETA current density distributions. In addition, neonatal seizure activity may be localized. The calculated current density distributions provide easy-to-interpret localized information about neonatal brain function, which may enable detailed longitudinal monitoring and potential assessment of treatment efficacy.


Radiotherapy and Oncology | 2018

External validation of an NTCP model for acute esophageal toxicity in locally advanced NSCLC patients treated with intensity-modulated (chemo-)radiotherapy

Frank Dankers; Robin Wijsman; E.G.C. Troost; C. Tissing-Tan; Margriet Kwint; J. Belderbos; Dirk De Ruysscher; Lizza Hendriks; Lioe-Fee de Geus-Oei; Laura Rodwell; Andre Dekker; René Monshouwer; Aswin L. Hoffmann; Johan Bussink

BACKGROUND AND PURPOSE We externally validated a previously established multivariable normal-tissue complication probability (NTCP) model for Grade ≥2 acute esophageal toxicity (AET) after intensity-modulated (chemo-)radiotherapy or volumetric-modulated arc therapy for locally advanced non-small cell lung cancer. MATERIALS AND METHODS A total of 603 patients from five cohorts (A-E) within four different Dutch institutes were included. Using the NTCP model, containing predictors concurrent chemoradiotherapy, mean esophageal dose, gender and clinical tumor stage, the risk of Grade ≥2 AET was estimated per patient and model discrimination and (re)calibration performance were evaluated. RESULTS Four validation cohorts (A, B, D, E) experienced higher incidence of Grade ≥2 AET compared to the training cohort (49.3-70.2% vs 35.6%; borderline significant for one cohort, highly significant for three cohorts). Cohort C experienced lower Grade ≥2 AET incidence (21.7%, p < 0.001). For three cohorts (A-C), discriminative performance was similar to the training cohort (area under the curve (AUC) 0.81-0.89 vs 0.84). In the two remaining cohorts (D-E) the model showed poor discriminative power (AUC 0.64 and 0.63). Reasonable calibration performance was observed in two cohorts (A-B), and recalibration further improved performance in all three cohorts with good discrimination (A-C). Recalibration for the two poorly discriminating cohorts (D-E) did not improve performance. CONCLUSIONS The NTCP model for AET prediction was successfully validated in three out of five patient cohorts (AUC ≥0.80). The model did not perform well in two cohorts, which included patients receiving substantially different treatment. Before applying the model in clinical practice, validation of discrimination and (re)calibration performance in a local cohort is recommended.


Radiotherapy and Oncology | 2016

PO-0679: Comparison of toxicity and outcome in stage III NSCLC patients treated with IMRT or VMAT

R. Wiisman; Frank Dankers; Esther G.C. Troost; A.L. Hoffmann; J. Bussink

Purpose or Objective: Intensity-modulated radiation therapy (IMRT) and volumetric-modulated arc therapy (VMAT) are widely used in the treatment of advanced stage non-small cell lung cancer (NSCLC). These techniques deliver conformal dose distributions at the cost of increased target dose heterogeneity (particularly IMRT) and larger volumes of surrounding healthy tissues receiving low doses (particularly VMAT). We evaluated whether these dosimetric differences between IMRT and VMAT are of influence on treatment toxicity and outcome.


International Journal of Radiation Oncology Biology Physics | 2017

Inclusion of Incidental Radiation Dose to the Cardiac Atria and Ventricles Does Not Improve the Prediction of Radiation Pneumonitis in Advanced-Stage Non-Small Cell Lung Cancer Patients Treated With Intensity Modulated Radiation Therapy

Robin Wijsman; Frank Dankers; Esther G.C. Troost; Aswin L. Hoffmann; Erik H.F.M. van der Heijden; Lioe-Fee de Geus-Oei; Johan Bussink


Radiotherapy and Oncology | 2017

OC-0142: Incidental dose to cardiac subvolumes does not improve prediction of radiation pneumonitis in NSCLC

Robin Wijsman; Frank Dankers; E.G.C. Troost; A.L. Hoffmann; J. Bussink


Radiotherapy and Oncology | 2015

PO-0659: 2D dose-surface data does not improve predictive performance of NTCP model for esophageal toxicity

Frank Dankers; Robin Wijsman; E.G.C. Troost; J. Bussink; A.L. Hoffmann

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Robin Wijsman

Radboud University Nijmegen

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E.G.C. Troost

Dresden University of Technology

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Johan Bussink

Radboud University Nijmegen

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Aswin L. Hoffmann

Dresden University of Technology

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J. Bussink

Radboud University Nijmegen

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Lioe-Fee de Geus-Oei

Leiden University Medical Center

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René Monshouwer

Radboud University Nijmegen Medical Centre

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Andre Dekker

Maastricht University Medical Centre

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