Gabriela Ribeiro Pereira

Hyperossification in miniaturized toadlets of the genus Brachycephalus (Amphibia: Anura: Brachycephalidae): Microscopic structure and macroscopic patterns of variation

Species of the genus Brachycephalus, have a snout‐vent length of less than 18 mm and are believed to have evolved through miniaturization. Brachycephalus ephippium, is particularly interesting; because its entire skull is hyperossified, and the presacral vertebrae and transverse processes are covered by a dorsal shield. We demonstrate in this paper that, at the macroscopic level, a completely hyperossified skull and dorsal shield occur only in B. ephippium, but not in B. ferruginus, B. izechsohni, B. pernix, B. pombali, B. brunneus, B. didactylus, and B. hermogenesi. An intermediate condition, in which the skull is hyperossified but a dorsal shield is absent, occurs in B. vertebralis, B. nodoterga, B. pitanga, and B. alipioi. The microscopic structure of hyperossification was examined in skulls of B. ephippium and B. pitanga, revealing a complex organization involving the presence of Sharpey fibers, which in humans are characteristic of periodontal connections. J. Morphol., 2009.

Geographic Variation in Cranial Shape in the Pumpkin Toadlet (Brachycephalus ephippium): A Geometric Analysis

Abstract The description of patterns of variation in any character system within well-defined species is fundamental for understanding lineage diversification and the identification of geographic units that represent opportunities for sustained evolutionary divergence. In this paper, we analyze intraspecific variation in cranial shape in the Pumpkin Toadlet, Brachycephalus ephippium–a miniaturized species composed of isolated populations on the slopes of the mountain ranges of southeastern Brazil. Shape variables were derived using geometric-statistical methods that describe shape change as localized deformations in a spatial framework defined by anatomical landmarks in the cranium of B. ephippium. By statistically weighting differences between landmarks that are not close together (changes at larger geometric scale), cranial variation among geographic samples of B. ephippium appears continuous with no obvious gaps. This pattern of variation is caused by a confounding effect between within-sample allometry and among-sample shape differences. In contrast, by statistically weighting differences between landmarks that are at close spacing (changes at smaller geometric scale), differences in shape within- and among-sample variation are not confounded, and a marked geographic differentiation among population samples of B. ephippium emerges. The observed pattern of geographic differentiation in cranial shape apparently cannot be explained as isolation-by-distance. This study provides the first evidence that the detection of morphological variation or lack thereof, that is, morphological conservatism, may be conditional on the scale of measurement of variation in shape within the methodological formalism of geometric morphometrics.

Elemental distribution mapping on breast tissue samples

The main of this work is to determine the elemental and absorption distribution map in breast tissue samples by X-ray fluorescence and X-ray transmission microtomography. The experiments were performed at the X-ray fluorescence beamline (D09B-XRF) in the Brazilian Synchrotron Light Source (LNLS), Campinas, Brazil. A quasi-monochromatic beam produced by a multilayer monochromator was used as an incident beam. The sample was placed on a high precision goniometer and translation stages that allow rotating as well as translating it perpendicularly to the beam. The fluorescence photons were collected with an energy dispersive HPGe detector placed at 90 degrees to the incident beam, while transmitted photons were detected with a fast Na(Tl) scintillation counter () placed behind the sample on the beam direction. All the tomographic images were reconstructed using a filtered-back projection algorithm. In the breast tissue samples, it was possible to determine the distribution of Zn, Cu and Fe in healthy tissue and tumor.

Diffraction-enhanced imaging microradiography applied in breast samples

The diffraction-enhanced imaging (DEI) is a powerful tool to observe tumors and other diseases in breast tissue and provide more precise diagnostics. In this work DEI was used to analyze breast tissues details that have poor attenuation contrast. An X-ray imaging system with DEI techniques was developed using synchrotron radiation. The DEI experiment was performed in D10A-XRD2 beamline at the Brazilian Synchrotron--LNLS. The pre-monochromator, upstream of the beamline was adjusted to 10.7 keV. The samples were positioned between two channel-cut Si(333) in non-dispersive geometry mounted in a double axes diffractometer. A direct conversion water-cooled CCD camera of 1242 pixel x 1152 pixel of 25 microm x 25 microm each was used as a two-dimensional detector in scanning mode. The DEI system could show details in low attenuation tissues based on the contrast imaging obtained by attenuation, refraction gradient and ultra-small angle scatter characteristics. In this work the capacity to observe different types of structures and details in breast tissues were investigated.

Distribution of Fe, Cu and Zn in Cellular Spheroid Derived Human Prostate Tumor Cells by Synchrotron X-Ray Fluorescence

The formation of three-dimensional cell microspheres such as spheroids has attracted attention as a useful culture technique. In this study, we investigated the distribution (mapping) of Fe, Cu and Zn in cellular spheroid derived human prostate tumor cells. The measurements were performed in standard geometry of 45° incidence, exciting with a white beam collimated with the help of a 20 μm diameter optical capillary in the XRF beam line at the Synchrotron Light National Laboratory (Campinas, Brazil). The results showed that all the elements analyzed presented non-uniform distribution. The spheroids analyzed showed different elemental distribution of Fe and Cu. Zinc concentrations were higher in the central regions of the spheroids analyzed.

Biological tissues analysis by XRF microtomography

The main of this work is to determine the elemental distribution in breast and prostate tissue samples in order to verify the concentration of some elements correlated with characteristics and pathology of each tissue observed by the X-ray transmission microtomography (microCT). The experiments were performed at the X-ray fluorescence beamline of the Brazilian Synchrotron Light Laboratory. The microCT images were reconstructed using a filtered-back-projection algorithm and the XRF microtomographies were reconstructed using a filtered-back-projection algorithm with absorption corrections.

Imaging System for XRF Microtomography at LNLS-Brazil

An X-ray transmission microtomography (CT) system combined with an X-ray fluorescence microtomography (XRFCT) system was implemented in the Brazilian Synchrotron Light Laboratory (LNLS), Campinas, Brazil. The main of this work is to determine the elemental distribution map in reference samples and breast tissue samples in order to verify the concentration of some elements correlated with characteristics and pathology of each tissue observed by the transmission CT. The experiments were performed at the X-Ray Fluorescence beamline (D09B-XRF) of the Brazilian Synchrotron Light Laboratory, Campinas, Brazil. A quasi-monochromatic beam produced by a multilayer monochromator was used as an incident beam. The sample was placed on a high precision goniometer and translation stages that allow rotating as well as translating it perpendicularly to the beam. The fluorescence photons were collected with an energy dispersive HPGe detector placed at 90deg to the incident beam, while transmitted photons were detected with a fast Na(Tl) scintillation counter placed behind the sample on the beam direction. The CT images were reconstructed using a filtered-back projection algorithm and the XRFCT were reconstructed using a filtered-back projection algorithm with absorption corrections.

Ultrasonic inspection of adhesive joints of composite pipelines

Composite pipelines are an attractive solution when traditional materials are not suitable for this purpose, which happens frequently at aggressive environments and also where the structural weight is a limiting factor. This work studies the application of the ultrasonic technique at the detection of defects as lack of adhesive and lack of adhesion, commonly found in adhesive joints of glass fiber reinforced plastic (GFRP) pipelines applied at onshore and offshore facilities. Computational simulations were conducted in CIVA 11© software (beta version) in order to obtain the best possible configuration for the inspections, applying the pulse-echo technique. Experimental results were compared to these simulations and several transducers were tested. An inspection methodology and reference blocks were developed for the calibration of the inspections. Some samples were selected for cutting in order to compare the ultrasonic results and the real condition of the joints. Results show that smaller frequencies ar...

Magnetic and Electrochemical Techniques as Tools to Detect Deleterious Phases in Duplex Stainless Steels

The development of techniques to detect deleterious phases in duplex and super duplex stainless steel has a great technical-scientific appeal. However, establishing a quality control of these steels using a unique technique of inspection requires an attentive analysis about its limits and sensibility of detections. Thus, the current work compares magnetic techniques based on eddy current methods and electrochemical potentiokinetic reactivation with double loop to detect deleterious phases in duplex stainless steel. The limitations and advantages of each technique are discussed mainly concerning the viability to detect sigma phase and chromium nitride.

Elemental distribution images in prostate samples by X-ray fluorescence microtomography.

An X-ray transmission microtomography (CT) system combined with an X-ray fluorescence microtomography (XRFμCT) system was implemented in the Brazilian Synchrotron Light Laboratory (LNLS), in order to determine the elemental distribution in prostate samples aiming at establishing a correlation between the concentration of some elements and the characteristics and pathology of the tissues. The CT images were reconstructed using a filtered-back projection algorithm and the XRFμCT images were reconstructed using a filtered-back projection algorithm with absorption corrections.