Gema Martinez-Criado

Mechanisms of gold biomineralization in the bacterium Cupriavidus metallidurans

While the role of microorganisms as main drivers of metal mobility and mineral formation under Earth surface conditions is now widely accepted, the formation of secondary gold (Au) is commonly attributed to abiotic processes. Here we report that the biomineralization of Au nanoparticles in the metallophillic bacterium Cupriavidus metallidurans CH34 is the result of Au-regulated gene expression leading to the energy-dependent reductive precipitation of toxic Au(III)-complexes. C. metallidurans, which forms biofilms on Au grains, rapidly accumulates Au(III)-complexes from solution. Bulk and microbeam synchrotron X-ray analyses revealed that cellular Au accumulation is coupled to the formation of Au(I)-S complexes. This process promotes Au toxicity and C. metallidurans reacts by inducing oxidative stress and metal resistances gene clusters (including a Au-specific operon) to promote cellular defense. As a result, Au detoxification is mediated by a combination of efflux, reduction, and possibly methylation of Au-complexes, leading to the formation of Au(I)-C-compounds and nanoparticulate Au0. Similar particles were observed in bacterial biofilms on Au grains, suggesting that bacteria actively contribute to the formation of Au grains in surface environments. The recognition of specific genetic responses to Au opens the way for the development of bioexploration and bioprocessing tools.

Status of the hard X-ray microprobe beamline ID22 of the European Synchrotron Radiation Facility

The ESRF synchrotron beamline ID22, dedicated to hard X-ray microanalysis and consisting of the combination of X-ray fluorescence, X-ray absorption spectroscopy, diffraction and 2D/3D X-ray imaging techniques, is one of the most versatile instruments in hard X-ray microscopy science. This paper describes the present beamline characteristics, recent technical developments, as well as a few scientific examples from recent years of the beamline operation. The upgrade plans to adapt the beamline to the growing needs of the user community are briefly discussed.

Biomedical applications of the ESRF synchrotron-based microspectroscopy platform.

Very little is known about the sub-cellular distribution of metal ions in cells. Some metals such as zinc, copper and iron are essential and play an important role in the cell metabolism. Dysfunctions in this delicate housekeeping may be at the origin of major diseases. There is also a prevalent use of metals in a wide range of diagnostic agents and drugs for the diagnosis or treatment of a variety of disorders. This is becoming more and more of a concern in the field of nanomedicine with the increasing development and use of nanoparticles, which are suspected of causing adverse effects on cells and organ tissues. Synchrotron-based X-ray and Fourier-transformed infrared microspectroscopies are developing into well-suited sub-micrometer analytical tools for addressing new problems when studying the role of metals in biology. As a complementary tool to optical and electron microscopes, developments and studies have demonstrated the unique capabilities of multi-keV microscopy: namely, an ultra-low detection limit, large penetration depth, chemical sensitivity and three-dimensional imaging capabilities. More recently, the capabilities have been extended towards sub-100nm lateral resolutions, thus enabling sub-cellular chemical imaging. Possibilities offered by these techniques in the biomedical field are described through examples of applications performed at the ESRF synchrotron-based microspectroscopy platform (ID21 and ID22 beamlines).

Observation of metal precipitates at prebreakdown sites in multicrystalline silicon solar cells

The local prebreakdown behavior of a damage etched multicrystalline silicon solar cell produced from virgin grade feedstock was characterized. At the position of micrometer-scaled prebreakdown sites, which correlate with recombination active defects found along grain boundaries, micro-x-ray fluorescence mappings revealed the presence of Fe precipitate colonies. These measurements represent direct evidence that transition metal clusters lead to decreased breakdown voltage and cause soft diode breakdown.

Mn-rich clusters in GaN: Hexagonal or cubic symmetry?

In this study, we report the application of synchrotron radiation microprobe to the analysis of Mn-rich clusters in GaN. From the Mn and Ga fluorescence line intensity ratio, an average Mn concentration of 11% was deduced. A combination of fluorescence mapping with spectroscopic techniques enabled us to examine not only the cluster elemental nature but also their crystallographic orientation on the submicron scale. The strong polarization-dependent x-ray absorption near-edge structure features showed the preservation of the hexagonal symmetry in both cluster-free and Mn-rich regions. However, from the x-ray absorption data taken inside the clusters, a preferential disorder was observed in the direction parallel to the crystal growth rather than perpendicular to it.

ID16B: a hard X-ray nanoprobe beamline at the ESRF for nano-analysis.

ID16B is a versatile hard X-ray nanoprobe devoted to X-ray nano-analysis. It combines X-ray fluorescence, X-ray diffraction, X-ray absorption spectroscopy and 2D/3D X-ray imaging techniques.

ID22: a multitechnique hard X-ray microprobe beamline at the European Synchrotron Radiation Facility

The ID22 beamline is dedicated to hard X-ray microanalysis allowing the combination of fluorescence, spectroscopy, diffraction and tomography techniques in a wide energy range from 6 to 70 keV. The recent installation of an in-vacuum undulator, a new sample stage and the adaptation of various focusing optics has contributed to a great improvement in the capabilities of the beamline, which is now accessed by a wide user community issued from medical, earth and environmental science, archaeology and material science. Many applications requiring low detection limits for localization/speciation of trace elements together with structural analysis have been developed at the beamline on the (sub)micrometer scale. The possibility of combining simultaneously different analytical probes offers the opportunity of a thorough study of a given sample or scientific problem. This paper presents a review of the recent developments of the beamline and a detailed description of its capabilities through examples from different fields of applications.

Variability in sepiolite: Diffraction studies

Abstract Twenty sepiolites of known composition from different origins were analyzed to quantify the variability in structural parameters and its possible relationships with composition and morphology. Morphology SEM analyses led to classify the sepiolites into several groups, beyond the two simple macroscopic or clay groups. X‑ray powder diffraction with synchrotron light was used to discuss the variability of the a and b cell parameters with the nature of the cations and occupancy of the octahedral shell. Rietveld refinement using the ideal sepiolite model is performed on sepiolites at two temperatures: 225 °C (for zeolitically dehydrated sepiolite) and 25 °C (for hydrated ambient sepiolite). The latter permitted to locate ca. six molecules of the zeolitic H2O within the tunnels. A few samples were selected to evaluate the feasibility and potential of single-crystal diffraction methods: X‑ray microdiffraction and electron diffraction. The macroscopic sepiolites gave wellstructured and rich X‑ray fiber diffraction patterns, in excellent agreement with ab initio simulations. High-quality single-crystal electron diffraction patterns for three axis zones are indexed and compared with simulations. The experimental and modeling results for X‑ray microdiffraction and electron diffraction open a new path for quantitative crystallography on sepiolite and other fibrous clays from the sepiolite-palygorskite group.

Micro-x-ray absorption near-edge structure imaging for detecting metallic Mn in GaN

In this study, we report the application of a synchrotron radiation microprobe to the analysis of Mn valencies in GaN. X-ray absorption near-edge structure (XANES) images taken around MnK-edge in fluorescence detection mode reveal the concentration of oxidation states of Mn centers. By fitting the XANES curve for each point of the image, the distributions of the Mn0, Mn2+, and Mn3+ oxidation states are obtained. At low Mn concentrations, there is a homogeneous mixture of Mn2+ and Mn3+ centers, while at high Mn content strong spatial-dependent Mn0 and Mn2+ distributions characterize the XANES maps. In a supplementary way with respect to Mn2+, the Mn0 pattern suggests the presence of specific cluster-like features, indicating surface segregation of metallic Mn centers.

High-resolution angular beam stability monitoring at a nanofocusing beamline.

Two semi-transparent imaging beam-position monitors developed at the ESRF have been installed at the micro-analysis beamline ID22 for monitoring the angular stability of the X-ray beam. This system allows low-frequency (10 Hz) angular beam stability measurements at a submicroradian range. It is demonstrated that the incoming macro-beam angular fluctuations are one of the major sources of focal spot instabilities downstream of the Kirkpatrick-Baez mirrors. It is also shown that scanning the energy by rotating the so-called fixed-exit monochromator induces some unexpected angular beam shifts that are, to a large extent, deterministic.