Gerrit Jan Koomen
University of Milan
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Featured researches published by Gerrit Jan Koomen.
Journal of Biological Chemistry | 1998
Herman S. Overkleeft; G. Herma Renkema; Jolanda Neele; Paula Vianello; Irene O. Hung; Anneke Strijland; Alida M. van der Burg; Gerrit Jan Koomen; Upendra K. Pandit; Johannes M. F. G. Aerts
The existence of a non-lysosomal glucosylceramidase in human cells has been documented (van Weely, S., Brandsma, M., Strijland, A., Tager, J. M., and Aerts, J. M. F. G. (1993) Biochim. Biophys. Acta 1181, 55–62). Hypothetically, the activity of this enzyme, which is localized near the cell surface, may influence ceramide-mediated signaling processes. To obtain insight in the physiological importance of the non-lysosomal glucosylceramidase, the availability of specific inhibitors would be helpful. Here we report on the generation of hydrophobic deoxynojirimycin (DNM) derivatives that potently inhibit the enzyme. The inhibitors were designed on the basis of the known features of the non-lysosomal glucosylceramidase and consist of a DNM moiety, an N-alkyl spacer, and a large hydrophobic group that promotes insertion in membranes. In particular,N-(5-adamantane-1-yl-methoxy)pentyl)-DNM is a very powerful inhibitor of the non-lysosomal glucosylceramidase at nanomolar concentrations. At such concentrations, the lysosomal glucocerebrosidase and α-glucosidase, the glucosylceramide synthase, and the N-linked glycan-trimming α-glucosidases of the endoplasmic reticulum are not affected.
Journal of The Chemical Society-perkin Transactions 1 | 1973
Gerrit Jan Koomen; Abraham P. Kroon; Franciso R. Mas Cabré; Alfred P. Goores; Rob Peereboom; Upendra K. Pandit
3-(Adenin-9-yl)-N-2-hydroxyethylpyrrolidin-2-one (1) was synthesized by constructing the purine base on the amino-group of 3-amino-N-2-hydroxyethylpyrrolidin-2-one (3), itself obtained from 2-dibenzylaminobutyro-lactone by aminolysis, followed by chlorination of the product and recyclization. Attempts to obtain compound (3) from acylated 2-aminobutyrolactones (4a and b) led to side reactions, the mechanisms of which are discussed. 3-(6-Chloropurin-9-yl)-N-2-hydroxyethylpyrrolidin-2-one (18b) was converted into the AMP analogue (2) by a phosphorylation–amination–debenzylation sequence, lodination of compound (1), followed by dehydrohalogen-ation of the product led to the N-vinyl derivative (21 ), a monomer for a poly-A model.
Journal of The Chemical Society-perkin Transactions 1 | 1973
Gerrit Jan Koomen; Upendra K. Pandit
Hubert–Johnson reaction of the 2,4-diethoxypyrimidines (2a and b) with 2-bromobutyrolactone (3), followed by hydrolysis of the coupling products (4a and b), gave the pyrimidin-1-yl lactones (5a and b). 2-(1,2,3,4-Tetra-hydro-2,4-dioxopyrimidin-1 -yl)butyrolactone (5a) was converted into the N-vinyipyrrolidin-2-one analogue (11)via a five-step reaction sequence [(5a)→(7a)→(7b)→(8)→(10c)→(11)]. Polymerisation of the product (11) yielded material (12)(mol. wt. 80,000) which, in aqueous solution, exhibited a pronounced (25%) hypochromicity effect at 263 nm.
Journal of Medicinal Chemistry | 1977
Johanna J. M. Hageman; Martinus J. Wanner; Gerrit Jan Koomen; Upendra K. Pandit
Journal of the American Chemical Society | 2005
Boris Rodenko; M. Koch; A.M. van der Burg; Martin J. Wanner; Gerrit Jan Koomen
Journal of Medicinal Chemistry | 1980
Martinus J. Wanner; Johanna J. M. Hageman; Gerrit Jan Koomen; Upendra K. Pandit
ChemInform | 1986
W. F. A. Wijsmuller; Martin J. Wanner; Gerrit Jan Koomen; Upendra K. Pandit
ChemInform | 1980
Martin J. Wanner; J. J. M. Hageman; Gerrit Jan Koomen; Upendra K. Pandit
ChemInform | 1978
Martin J. Wanner; J. J. M. Hageman; Gerrit Jan Koomen; Upendra K. Pandit
Archive | 2013
Johannes Maria Franciscus Gerardus Aerts; マリア フランシスキュス ヘラルデュス アエルツ,ヨハネス; Upendra K. Pandit; クマール パンディット,ウペンドラ; Gerrit Jan Koomen; ヤン コーメン,ヘルリット; Herman Steven Overkleeft; ステーヴェン オーヴァークレーフト,ヘルマン; Paola Vianello; ヴィアネロ,パオラ