Gianni Bedini

Karyological knowledge of the Italian vascular flora as inferred by the analysis of “Chrobase.it”

Abstract Chromosome number knowledge of the Italian vascular flora is stored in the online database Chrobase.it, which includes 6723 records, referable to 3428 taxa, 2799 accepted species and subspecies (about 35% of the national flora), and 3410 different chromosome countings (cytotypes). Appropriate queries to Chrobase.it allowed us to calculate mean, modal and median chromosome numbers for the Italian vascular flora, for geographical subgroups (islands, south, centre, north) and for selected orders, families and genera. Chromosome number data were available for 41 out of 55 orders (74%) and 107 out of 428 families (67%), represented by 664 out of 1297 genera (51%). The most studied administrative regions are Sicily (844 taxa), Tuscany (592 taxa), and Sardinia (390 taxa), while the most studied families are Asteraceae (465 taxa), Fabaceae (266 taxa), Brassicaceae (158 taxa), and Poaceae (144 taxa). Chromosome numbers range from 2n = 6, occurring in several species of Hypochaeris (Asteraceae), to 2n = 240, occurring in Ophioglossum (Ophioglossaceae), Dryopteris (Dryopteridaceae) and Arenaria (Caryophyllaceae) (mode is 2n = 18, and median is 2n = 24). Chromosome number variability was analyzed by frequencies (linear plots) and ANOVA, resulting in significant differences among geographical groups (mean chromosome number increasing from islands-south to centre-north) and selected taxa. B-chromosomes occur in 5.3% of data (148 taxa) and their number is not significantly different among geographical areas, while they occur only in 14 orders, 17 families, and 56 genera. The number of B-chromosomes ranges from 1 to 13 (mode = 1, median = 2).

Are Red Lists really useful for plant conservation? The New Red List of the Italian Flora in the perspective of national conservation policies

“The New Red List of the Italian Flora” includes all the Italian policy species and other species of known conservation concerns for a total of 400 taxa, 65% of which are threatened with extinction. The Red List is based on a huge georeferenced data-set useful for conservation purposes.

Chromosome numbers of the Italian flora. From the Caryologia foundation to present

Abstract After slightly more than four decades from the first chromosome counts ever, the very first chromosome count on Italian plants was published in 1925 by Alberto Chiarugi. From this starting point, fundamental cornerstones of Italian plant karyology are: 1) the foundation, in Pisa, of the international journal Caryologia, now edited in Florence and indexed by ISI Web of Science© under the category Genetics and Heredity. 2) the constitution, within the Italian Botanical Society, of the Working Group for Plant Cytotaxonomy and Embryology (currently Plant Biosystematics), which in 1970 (still in Pisa) fostered the publication of the column Numeri Cromosomici per la Flora Italiana on the journal Informatore Botanico Italiano. 3) the constitution, at the end of the ‘90s, of the online database Chrobase.it – Chromosome numbers for the Italian flora. The history and role of cytotaxonomic research is highlighted, by reconstructing life and science of four eminent scientists: Alberto Chiarugi (1901-1960), Giuseppe Martinoli (1911-1970), Francesco D’Amato (1916-1998) and Emilio Battaglia (1917-2011). Despite 86 years of more or less continuous research, the geographical and taxonomical coverage of the Italian territory is still incomplete.

Homoploid hybrid speciation in Doronicum L. (Asteraceae)? Morphological, karyological and molecular evidences

Abstract The first unambiguous documentation of hybridism in the genus Doronicum (Senecioneae – Asteraceae) is reported. All our morphological, karyological and molecular data concur to indicate that Doronicum × minutilloi Peruzzi hybr. nov. (2n = 60) is a hybrid growing in Monti Aurunci (Central Italy), originated from the spontaneous crossing D. orientale Hoffm. (2n = 60) × D. columnae Ten. (2n = 60). This new hybrid shows a slightly higher morphological, karyotypic and ribotypic affinity with D. columnae, but shares a trnL-trnF IGS haplotype with D. orientale, and co-occurs with the latter species only; it has reduced fertility and a high potential for vegetative propagation through rhizome fragmentation. Our results led us to suspect in fieri homoploid hybrid speciation.

Does actually mean chromosome number increase with latitude in vascular plants? An answer from the comparison of Italian, Slovak and Polish floras

Abstract We compared chromosome number (CN) variation among vascular floras of three different countries with increasing latitude in the Boreal hemisphere: Italy, Slovakia, Poland. Aim of the study was to verify whether the patterns of CN variation parallel the differences in latitudinal ranges. The three datasets comprised 3426 (Italy), 3493 (Slovakia) and 1870 (Poland) distinct cytotypes. Standard statistics (ANOVA, Kruskal–Wallis tests) evidenced significant differences among the three countries, mean CN increasing together with latitude. On the contrary, an inverse relation (r = -1) was evidenced among the frequency of odd CNs and latitude. Our results show that the hypothesis of a polyploid increase proportional with distance from the Equator seems to be confirmed, when territories from the same hemisphere are compared.

Chromosome number variation of the Italian endemic vascular flora. State-of-the-art, gaps in knowledge and evidence for an exponential relationship among even ploidy levels

Abstract The Italian endemic vascular flora is composed of 1,286 specific and subspecific taxa. From the critical analysis of “Chrobase.it”, 711 of them (about 55%) have been studied from a karyological point of view. These taxa belong to 52 out of 56 families and 204 out of 284 genera. These data suggest that endemic species are more studied than the flora as a whole. Mean chromosome number for Italian endemics is 2n = 30.68 ± 20.27 (median: 2n = 26, mode: 2n = 18). These values are very close to those known for the whole flora. Similar variation ranges, among endemics and species with wider distribution, are likely to reflect similar evolutionary trends. Known chromosome numbers in Italian endemics range from 2n = 8 to 2n = 182. About 9% of taxa show more than one cytotype and the frequency of Bs in the Italian endemic vascular flora is 3.3%. These values are slightly smaller compared with the whole Italian flora. Finally, for the basic chromosome numbers x = 7, 8, 9, the proportion of diploids (2n = 2x) to even polyploids (2n = 4x, 6x, 8x and 10x) can be described by the exponential function f(p) = e(5.539 – 0.637p) (R2 = 0.984).

Chromosome number variation in two antipodean floras

Italy and New Zealand are very similar in shape, extension, altitudinal and latitudinal range but located in opposite hemispheres. This paper compares variation in chromosome number in these two hotspot regions. The results challenge previous ideas concerning links between geography and patterns of chromosome number variation.

Wikiplantbase #Toscana, breaking the dormancy of floristic data

The online platform “Wikiplantbase #Toscana” provides a framework where the full set of georeferenced floristic records of Tuscany (central Italy) can be entered, stored, updated and freely accessed through the Internet. As of 5 January 2015, the database stores 67,360 floristic records, referable to 3578 accepted specific and subspecific taxa. Most records are based on published data (80.6% of the total), then by published herbarium specimens (15.1%) and on unpublished field data (3.8%); unpublished herbarium records account only for 0.5% of the stored data. At present, the most represented species is the fern Pteridium aquilinum (L.) Kuhn subsp. aquilinum (Dennstaedtiaceae) with 234 records for 219 localities, but 625 species are still represented only by one record for a single locality. Data acquisition is far from complete, but in slightly more than one year a massive amount of data was accumulated, and can be maintained up-to-date with relatively little effort. This could power several researches such as, for example, (1) taxonomic researches especially on species and genera in Tuscany and Italy; (2) studies on the distribution of diversity across administrative or ecological boundaries; (3) evaluation of conservation status of endangered taxa; and (4) static and dynamic range modelling and evolution niche studies.

A new index for the quantification of chromosome number variation: an application to selected animal and plant groups.

Quantitative parameters have been used to characterize chromosome number (CN) variation. This gave us the idea to collect available data in various organisms and compare them, in order to verify if variation patterns differ between animal and plant groups and to quantify these patterns with an Index of CN Heterogeneity (ICNH), useful as a parameter to compare related taxonomical/geographical groups of organisms. To the best of our knowledge, this is the first attempt to compare CN variation in animal and plant groups with large datasets. The quantitative analysis allowed detecting significant differences among most groups of animals and plants. The most striking difference, however, is the close relationship between mean CN and SD restricted to plants, in which higher CN are also associated with a larger variation degree, possibly due to the well known genomic plasticity in this group and a propensity for polyploidization higher than in animals. The ICNH defined here can be easily calculated for both animal and plant groups based on commonly available data. It summarizes data accumulated in over a century of research and includes so-called anomalies like fB and fOCN, sometimes overlooked by researchers due to lack of a proper way of comparison.

A comprehensive datamodel for karyological databases

A project-independent data model for the entire range of karyological information provides a comprehensive picture of all data items presently used in karyological research and characterizes their logical inter-relation. It is presented in the form of a hierarchical decomposition of the subject matter down to attribute-level data items. The applied analytical methods are relevant for the structuring of information in other branches of biology. Only sporadic and inconsistent efforts have previously been made to make the huge amount of available karyological information accessible in electronic form. In the view of growing demand for the availability of scientific data on computer networks, further attempts are to be expected presently. The present data model provides a framework for the design of individual databases and ensures compatibility of the resulting datasets.