Güler Temizkan
Istanbul University
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Publication
Featured researches published by Güler Temizkan.
Journal of natural science, biology, and medicine | 2010
İsmail Hamad; Nazli Arda; Murat Pekmez; Semian Karaer; Güler Temizkan
The ability of Trolox (6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid), a water-soluble vitamin E analogue, to prevent oxidative damages is well characterized, but the mechanisms underlying it remain unclear. The protective effect of Trolox pre-treatment on H2O2-induced toxicity might be attributed to the decreased cellular permeability to H2O2 or in vitro scavenging activity of Trolox, induction of antioxidant enzymes or the direct scavenging activity of Trolox. The results obtained rule out the first and second possibilities and intracellular scavenging activity was found to be the mechanism whereby Trolox confers protection. This was confirmed by measuring protein oxidation (levels), and the observed decrease in proteasomal activity indicated that the decrease in protein carbonyls was due to Trolox scavenging activity rather than proteasome activation. In conclusion, the intracellular scavenging activity of Trolox is a key protective mechanism against H2O2. These findings obtained in Schizosaccharomyces pombe, a good model organism for eukaryotic cells, can be used as standard protocols for investigating the antioxidant activity of pure or complex potential antioxidants.
Protoplasma | 2009
Cenk Kig; Güler Temizkan
Nitric oxide synthases (NOS) catalyze the synthesis of ubiquitous signaling molecule nitric oxide (NO) which controls numerous biological processes. Using a spectrofluorometric NOS assay, we have measured the rate of total NO production in the crude cell extracts of Schizosaccharomyces pombe. NO production was reduced in the absence of NOS cofactors calmodulin and tetrahydrobiopterin, and a competitive NOS inhibitor NG-nitro-l-arginine methyl ester (l-NAME) was able to cause a statistically significant inhibition on the rate of total NO production. These results, for the first time, provide evidence that an enzyme with a NOS-like activity may be present in the fission yeast. In order to assess the possible regulatory roles of NO as a signaling molecule in this yeast, using the differential display technique, we screened for NO-responsive genes whose expression decreased upon exposure to l-NAME and increased in response to an NO donor, sodium nitroprusside treatment. Differential expression patterns of byr1, pek1, sid1, and wis1 genes were confirmed by quantitative real-time PCR. The physiological experiments performed based on the functions and molecular interactions of these genes have pointed to the possibility that NO production might be required for sporulation in S. pombe. Taken together, these findings suggest that NO may function as a signaling molecule which can induce both transcriptional and physiological changes in the fission yeast. Hence, these data also imply that S. pombe can be used as a model system for investigating the mechanisms underlying NO-related complex signaling pathways.
Bioscience, Biotechnology, and Biochemistry | 2005
Cenk Kig; Sezai Türkel; Güler Temizkan
We have isolated 14 different Schizosaccharomyces pombe mutants that synthesize invertase enzyme constitutively. Analyses of invertase activities revealed that the degrees of resistance to glucose repression were not similar among different complementation groups. One of the complementation groups appeared to be associated with functional and/or regulatory defects in hexose transport. Another complementation group appeared to be specific for the regulation of the inv1 gene alone, implying that these mutations might be associated with different genes acting on the glucose sensing and signaling pathway. In addition, we found that the wild-type level glucose uptake is essential for the full-level repression of inv1 expression.
Biotechnology & Biotechnological Equipment | 2006
Tuba Gunel; M. Kuntz; N. Arda; S. Ertürk; Güler Temizkan
ABSTRACT Geranylgeranyl pyrophosphate synthase (GGPPS) is a key enzyme in carotenoid biosynthetic pathway, catalyzing the synthesis of its C20 precursor. The gene encoding GGPPS from bell pepper (Capsicum annuum) has been cloned in Schizosaccharomyces pombe and its heterologous expression analyzed in this model organism for eukaryotes. We aim to partially direct the ergosterol pathway to carotenoid biosynthesis in this yeast. This yeast is not able to synthesize carotenoids naturally, but it produces farnesyl pyrophosphate (FPP), an intermediate metabolite for both ergosterol and geranylgeranyl pyrophosphate (GGPP) biosynthesis. S. pombe transformants carrying the pepper GGPPS cDNA were named KTG. In one of the transformant (KTG1), heterologous expression of GGPPS gene has been analyzed. The GGPPS gene was shown by dot and Northern hybridization to be successfully transcribed. When water soluble proteins isolated from the transformant cells have been analyzed on SDS-denaturating gels, a ~37 kDaprotein band has been detected which was not found in the host. In order to understand whether this heterologous protein in KTG1 transformant is an active GGPPS or not, changes in ergosterol level have been analyzed by HPLC. 50–60% decrease in ergosterol content was found in the KTG1 transformant when compared to the host. These results suggest that production of GGPP derivatives can now be attempted, for instance carotenoids, through heterologous expression of carotenoid biosynthetic genes in a non-carotenogenic yeast, S. pombe.
Biologia | 2008
Murat Pekmez; Nazli Arda; İsmail Hamad; Cenk Kig; Güler Temizkan
Oxidative stress causes damage to proteins, lipids and nucleic acids, and thereby compromises cell viability. Some of the oxidative stress markers in an eukaryotic model organism, fission yeast Schizosaccharomyces pombe, were evaluated in this study. Intracellular oxidation, protein carbonyls, lipid peroxidation and reduced glutathione (GSH) levels were investigated in H2O2-treated and non-treated control cells. It was observed that increased H2O2 concentration proportionally lowered the cell number and increased the intracellular oxidation, lipid peroxidation and protein carbonyl levels in S. pombe. A dose-dependent decrease in GSH level was also detected. The fission yeast S. pombe is best known for its contribution to understanding of eukaryotic cell cycle control. S. pombe displays a different physiology from Saccharomyces cerevisiae in several ways and is thus probably more closely related to higher eukaryotes. The purpose of this study was to provide some data about the effects of hydrogen peroxide on the proteins and lipids in the fission yeast. The data obtained here is expected to constitute a basis for the further studies on redox balance and related processes in yeast and mammalian cells.
Biochemical Genetics | 2012
Bedia Palabiyik; Cenk Kig; Murat Pekmez; Levent Dalyan; Nazli Arda; Güler Temizkan
The invertase mutant defective in the glucose signaling pathway of Schizosaccharomyces pombe (ird11) is resistant to glucose repression. This mutant is able to consume sucrose alongside glucose and grows in glucose-containing media with a generation time close to that of the wild type. Intracellular oxidation, protein carbonyl, and reduced glutathione levels and catalase, superoxide dismutase, and glutathione peroxidase activity were investigated in ird11, to determine the relationship between oxidative stress response and glucose signaling. The expression profiles of some genes involved in regulation of glucose repression (fbp1, fructose-1,6-bis-phosphatase; hxk2, hexokinase) and stress response (atf1 and pap1 transcription factors; ctt1, catalase; sod1, Cu,Zn superoxide dismutase) were analyzed using the quantitative real-time PCR technique. Oxidative stress response in ird11 seems to be affected by glucose signaling in a manner different from that caused by glucose deprivation.
Molecular Biotechnology | 2006
Aysegul Topal Sarikaya; Gokhan Akman; Güler Temizkan
We isolated and characterized a nickel (Ni2+)-resistant mutant (GA1) of Schizosaccharomyces pombe. This mutant strain displayed resistance to both Ni2+ and Zn2+, but not to Cd2+, Co2+, and Cu2+. The growth rate of GA1 increased proportionally with increasing Mg2+ concentrations until 50 mM Mg2+. The GA1 mutation phenotype suggests a defect in Mg2+ uptake. Sequence analysis of the GA1 open reading frame (ORF) O13779, which is homologous to the prokaryotic and eukaryotic CorA Mg2+ transport systems, revealed a point mutation at codon 153 (ccc to acc) resulting in a Pro 153Thr substitution in the N-terminus of the CorA domain. Our results provide novel genetic information about Ni2+ resistance in fission yeast. Specifically, that reducing Mg2+ influx through the CorA Mg2+ transport membrane protein confers Ni2+ resistance in S. pombe. We also report that Ni2+ ion detoxification of the fission yeast is related to histidine metabolism and pH.
Biologia | 2008
Bedia Palabiyik; Semian Karaer; Nazli Arda; Sidika Ertürk Toker; Güler Temizkan; Steven L. Kelly; Aysegul Topal Sarikaya
Heterologous expression systems can be utilized to great advantage in the study of cytochrome P450 enzymes. P450 3A4 is one of the major forms of cytochrome P450 found in liver. It is also involved in the metabolism of numerous widely used drugs and xenobiotics. In the present study human liver cytochrome P450 3A4 gene was transferred into the fission yeast Schizosaccharomyces pombe via two different S. pombe expression vectors carrying thiamine repressible promoter — nmt1 (pREP42) and constitutive promoter — adh1 (pART1). Heterologously expressed cytochrome P450 3A4 was detected in the cells grown in minimal (EMM) or rich medium (YEL) containing 0.5% (w/v) glucose. A typical cytochrome P450 peak for 3A4 was observed at 448 nm in microsomal fraction. The presence of heterologous expression of 3A4 form was also determined by SDS-PAGE and it molecular mass was identified as 52 kDa. The enzyme activity was confirmed by HPLC analysis, using testosterone as substrate.
Biotechnology & Biotechnological Equipment | 2001
Aysegul Topal Sarikaya; Tuba Gunel; N. Arda; T. San; F. Ercan; G. Akman; Güler Temizkan
ABSTRACT In this project, we investigated effects of nickel (Ni) on the growth and ultrastructure of Schizosaccharomyces pombe wild type strain. It was found that cells were tolerant against a concentration of 2 mM Ni+2 but the generation time was extended to 5 hours from 2.5 hours for the cells growing in Ni-free YEP medium. 76% of Ni+2 was removed in 30 min by the cells grown in YEP containing 1mM Ni+2. We also analyzed the ultrastructural modifications of the cells grown in I mM Ni+2. There was a visible thickening of the cell wall and increase in the number of small cytoplasmic vesicles. The plasma membrane appeared irregular compared to smoother contour in control. Vacuoles contained large amounts of electron-dense materials and the size of vacuoles also increased.
Genetics and Molecular Biology | 2006
Semian Karaer; Aysegul Topal Sarikaya; Nazli Arda; Güler Temizkan