Guofu Cheng

Identification and molecular analysis of the highly pathogenic duck hepatitis virus type 1 in Hubei province of China

Duck hepatitis virus types 1 (DHV-1) JX strain was isolated from infected ducklings with clinical symptoms from Hubei province of China. These isolated strains showed high pathogenicity to both duck embryo and duckling in Duck embryo neutralization assay and animal infection experiment. The complete genome of JX strain was sequenced. Comparative genome analysis with other available strains in GenBank indicated that JX strain shared 94-99% similarity at the nucleotide level and 95-99% at amino acid level with other DHV-1 strains. Sequence results showed that mutations of nucleotide and amino acid were mainly distributed in VP1 genes. Our result implied that the VP1 probably was the major virulent determinant of DHV-1. In addition, 13 DHV-1 strains from different area were analyzed in phylogeny and they can be grouped into four distinct lineages. The new-identified JX strain was grouped into one lineage with A66 and C80 strains, which were also isolated from China.

Cytokine gene expression in the livers of ducklings infected with duck hepatitis virus-1 JX strain

Duck hepatitis virus type 1 (DHV-1) causes a highly contagious disease in ducklings and is often associated with liver necrosis, hemorrhages, and high mortality. In the current study, the expression levels of gene transcripts encoding proinflammatory cytokines and the virus were measured by quantitative reverse-transcription PCR in duck livers after infection with a DHV-1 JX isolate obtained from natural cases in Hubei Province, China. In addition, sera IL-1β, IL-6, and alanine aminotransferase levels were quantified. Liver histopathology was examined following DHV-1 infection. The ducklings died within 1 to 2 d postinfection (d.p.i.) because of typical liver degeneration, hemorrhage, necrosis, and bile-duct epithelial cell proliferation. Transcripts of the cytokines IFN-α, IL-6, TNF-α, and IL-10 decreased by 0.5 d.p.i. and then gradually increased at 1 d.p.i. Similarly, DHV-1 JX 3D gene levels in the liver sharply increased at 1 d.p.i. and then maintained a high level. In contrast, liver TNF-α and IL-1β transcripts showed no increased expression of the cytokine gene postinfection and significantly decreased compared with the expression at 0.25 d.p.i., only the expression of IFN-α transcripts increased 128-fold by 1 d.p.i. Changes in the serum IL-6 level remained relatively stable postinfection and not significantly different compared with that of the control (P > 0.05), whereas serum levels of IL-1β significantly decreased at 0.5 d.p.i. and increased from 1 d.p.i. onwards (P < 0.05). Serum alanine aminotransferase levels significantly increased 2 d.p.i. compared with that of the control group (P < 0.01), which seemed to keep with the number of dead ducks. The cytokines exhibited a biphasic pattern following DHV-1 JX infection. Taken together, the data indicated that duckling liver inflammatory responses were produced following experimental DHV-1 JX infection involving multiple cytokines.

Apoptosis induction in duck tissues during duck hepatitis A virus type 1 infection

To investigate the role of apoptosis in duck viral hepatitis pathogenesis, 4- and 21-d-old ducks were inoculated with duck hepatitis A virus serotype 1 and killed at 2, 6, 12, 24, and 48 h postinfection. TdT-mediated dUTP nick-end labeling was used to detect apoptosis cells. Expression profiles of apoptosis-related genes including caspase-3, -8, -9, and Bcl-2 in spleen, bursa of Fabricius, liver, and the quantity of virus in blood were examined using real-time PCR. The TdT-mediated dUTP nick-end labeling analysis indicated there was a significant difference of apoptotic cells between treatments and controls. The same difference also appeared in virus amount variation in blood during infection. Gene expression analysis revealed that the apoptosis-related gene expression profile was different in the 2 groups, and also different between various organs. This study suggested that apoptosis may play an important role in duck hepatitis A virus serotype 1 infection, and apoptosis suppression might facilitate virus multiplication, resulting in the highest virus concentration in the host.

Isolation and characterization of Streptococcus gallolyticus subsp. pasteurianus causing meningitis in ducklings

Increased mortality was observed in a group of 10-day-old ducklings in China in 2010. The dead ducklings were characterized by meningitis, suggesting microbial infection as the cause of disease. Laboratory investigation led to the isolation of a bacterial strain designated as AL101002 from the brain of dead ducklings. Subsequent experimental infections with this strain resulted in marked symptoms in the ducklings similar to those observed in nature outbreaks. Gram-staining revealed Gram-positive cocci in pairs or short chains. Phenotypical analysis revealed the microorganism as Streptococcus pasteurianus. DNA sequencing revealed that the isolate was Streptococcus gallolyticus subsp. pasteurianus. Experimental infection with AL101002 resulted in the death of ducklings with meningitis. To the best of our knowledge, this is the first report of the isolation of S. gallolyticus subsp. pasteurianus with high virulence in ducklings.

Inducible Expression of both ermB and ermT Conferred High Macrolide Resistance in Streptococcus gallolyticus subsp. pasteurianus Isolates in China.

Streptococcus gallolyticus subsp. pasteurianus is an under-recognized pathogen and zoonotic agent causing opportunistic infections in humans. Despite increasing recognition of this subspecies as a cause for human infectious diseases, limited information is known about its antibiotic resistance mechanism. In this study, we aim to identify the molecular mechanism underlying the high macrolide resistance of six S. gallolyticus subsp. pasteurianus isolates from dead ducklings collected in several natural outbreaks in China during 2010–2013. All isolates exhibited multi-drug resistance including high macrolide resistance (MIC ≥ 1024 mg/L for erythromycin, and 512 mg/L for clarithromycin). Efflux-encoding mefA and mefE genes were not detectable in these isolates. The presence of 23S rRNA mutations in specific isolates did not significantly change macrolide MICs. No nucleotide substitutions were found in genes encoding ribosomal proteins L4 or L22. The ermB and ermT genes were found in the genomes of all isolates. These two genes were acquired independently in one highly virulent isolate AL101002, and clustered with Tn916 and IS1216, respectively. The expression of both ermB and ermT in all isolates was erythromycin inducible and yielded comparable macrolide MICs in all six isolates. Taken together, inducible expression of both ermB and ermT conferred high macrolide resistance in these S. gallolyticus subsp. pasterianus isolates. Our findings reveal new macrolide resistance features in S. gallolyticus subsp. pasteurianus by both ermB and ermT.

Genome Sequence of a Virulent Genotype III Newcastle Disease Virus Isolated from Laying Ducks in China

ABSTRACT Here, we report the complete genome sequence of a virulent Newcastle disease virus (NDV) strain HN1007, isolated from diseased duck flocks in Henan, China, in 2010. The isolate has a genome length of 15,186 nucleotides, and was classified as a member of genotype III of class II.

Protein Expressions and Their Immunogenicity from Riemerella anatipestifer Cultured in Iron Restriction Medium

Riemerella anatipestifer was cultured in both iron restriction media and normal media. Two-dimensional gel electrophoresis identified 23 proteins that significantly increased in the iron restriction media. Of them 12 proteins were analyzed with mass spectrography. Nine of 12 proteins belong to 6 different protein families: fibronectin type iii domain protein, secreted subtilase family protein, phosphoglycerate kinase, translation elongation factor, leucine-rich repeat-containing protein, and Galactose-binding domain-like protein. Other 3 proteins were novel with unknown function. Two novel proteins (Riean_1750 and Riean_1752) were expressed in prokaryotic expression systems. The specificities of these 2 novel proteins to R. anatipestifer were confirmed by western-blotting analysis. The ducks immunized with either protein had low mortality challenged by R. anatipestifer, 33.3% and 16.7%, respectively. The ducks developed 100% immunity when immunized with combined Riean_1750 and Riean_1752 proteins. The data suggested 2 novel proteins play important roles in the bacterial survival in the iron restricted environment. They could be used as subunit vaccines of R. anatipestifer.

Development and validation of a SYBR Green I real-time RT-PCR assay for detecting duck reovirus

SYBR Green I based real-time RT-PCR assay was developed for the detection and quantification of duck reovirus (DRV) using ABI PRISM 7500 sequence detection system. The assay was carried out using a set of primer designed to amplify highly conserved sequences of S2 gene of DRV. A 10-fold dilution series assay using a plasmid containing the cDNA of DRV S2 gene demonstrated the high sensitivity of the assay with a lowest detection limit of ≤1.48 copies/μL Standard deviation and coefficient of variation were low for both intra-assay and inter-assay variability. The assay performance was evaluated on 80 samples obtained from artificially infected Cherry Valley ducklings and 10 field specimens compared with the conventional RT-PCR assay. It was shown that 10 artificially infected samples tested negative in gel-based assay were positive for the real-time RT-PCR. DRV could be detected in all eight different tissues collected from the ducklings infected artificially. In contrast, the higher detection rate was obtained in the bursa of fabricius (90%), lung (90%), spleen (80%), and thymus (70%) than that in the liver (30%) as well as in the pancreas (10%). This method was rapid, specific, and sensitive for the detection of DRV and will be useful in veterinary diagnostic applications.