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Featured researches published by Hailin Su.


Journal of Animal Science | 2017

Genetic parameters for carcass and ultrasound traits in Hereford and admixed Simmental beef cattle: Accuracy of evaluating carcass traits1

Hailin Su; Bruce Golden; L. Hyde; S Sanders; Dorian J. Garrick

Genetic parameters are required to evaluate carcass merit using correlated real-time ultrasound (RTU) measurements. Many registered bulls and heifers are measured using RTU before consideration for selection as parents, whereas few animals are recorded for carcass traits and those are often crossbred steers. The objective of this study was to estimate genetic parameters required for evaluating carcass merit in the American Hereford Association (AHA) and the American Simmental Association (ASA) using multivariate models and to assess accuracy of carcass trait estimated breeding values (EBV) for selection candidates. All available carcass data including carcass weight (CWT), fat thickness (FAT), longissimus muscle area (LMA), and marbling score (MRB) were provided by the AHA and the ASA along with RTU data including fat thickness (UFAT), longissimus muscle area (ULMA), and percentage of intramuscular fat (UIMF). Carcass data comprised 6,054 AHA and 9,056 ASA cattle, while RTU data in comparable numbers from close relatives comprised 6,074 AHA and 7,753 ASA cattle. Pedigrees included 33,226 AHA and 37,665 ASA animals. Fixed effects for carcass and RTU data included contemporary group, age at scan/slaughter, and major breed percentages. Restricted maximum likelihood procedures were applied to all the carcass and RTU measurements, along with birth weight to account for selection, fitting 8-trait multivariate models separately for each breed association. Heritability estimates for AHA and ASA carcass traits were 0.41 ± 0.04 and 0.25 ± 0.03 for FAT, 0.47 ± 0.04 and 0.32 ± 0.03 for LMA, 0.48 ± 0.04 and 0.43 ± 0.04 for MRB, 0.51 ± 0.04 and 0.34 ± 0.03 for CWT, and for RTU traits were 0.29 ± 0.04 and 0.37 ± 0.03 for UFAT, 0.31 ± 0.04 and 0.44 ± 0.03 for ULMA, and 0.45 ± 0.04 and 0.42 ± 0.03 for UIMF. Genetic correlations for AHA and ASA analyses between FAT and UFAT were 0.74 ± 0.08 and 0.28 ± 0.13, between LMA and ULMA were 0.81 ± 0.07 and 0.57 ± 0.10, and between MRB and UIMF were 0.54 ± 0.08 and 0.73 ± 0.07. Predictions of carcass merit using RTU measurements in Hereford cattle would be more reliable for FAT and LMA than MRB, but the reverse would be true for admixed Simmental cattle. Genetic correlations for MRB in AHA and for FAT and LMA in ASA are less than currently assumed in their national evaluations. Collection of greater numbers of carcass measurements would improve the accuracy of genetic evaluations for carcass traits in both breeds.


Animal Industry Report | 2016

Estimation of Genetic Parameters for Carcass Traits and Their Corresponding Ultrasound Measurements in Crossbred Beef Cattle

Hailin Su; Dorian J. Garrick; Bruce Golden; Lauren Hyde

and Implications Variance parameters including heritabilities, genetic and residual correlations are required for national cattle evaluation. There are huge amounts of data available for estimating such variance parameters for growth traits, but much less data is available for carcass traits. In this study, heritabilities and genetic correlations were estimated using restricted maximum likelihood on carcass weight (CWT), fat thickness (FAT), longissimus muscle area (LMA), marbling score (MRB), birth weight (BW), and ultrasound measurements of fat thickness (UFAT), longissimus muscle area (ULMA) and estimated percentage of intramuscular fat (UIMF) for crossbred cattle with carcass data recorded by the American Simmental Association. A multivariate animal model was fitted using ASREML4 software. The results demonstrate that UIMF measurements provide some useful information for carcass MRB (rg=0.73), but genetic correlations were only moderate between ULMA and LMA (0.56) and were weak between UFAT and FAT (0.38). The implications are that carcass measurements on progeny are the most reliable approach to evaluate carcass traits. Introduction American Simmental Association (ASA) like other breed associations has long been using real time ultrasound data in addition to carcass measurements to enhance national cattle evaluations on carcass traits. Studies revealed that evaluations combining ultrasound and carcass data outperform the ones that are based on carcass data alone. To date, most reports of parameters for use in national cattle evaluation were based on bivariate animal model analyses and some have fitted contemporary groups of fixed breed fractions rather than accounting for breed percentages. The objective of this study was to estimate genetic parameters required for evaluating carcass merit in the multi-breed analyses undertaken by International Genetic Solutions, using a single multivariate model fitting major breed percentages as fixed effects.


Livestock Science | 2016

Genome-wide association study of growth and body composition traits in Brangus beef cattle

Ziqing Weng; Hailin Su; Mahdi Saatchi; Jungjae Lee; Milton G. Thomas; Jenelle R. Dunkelberger; Dorian J. Garrick


Animal Industry Report | 2016

Improved Accuracy of Across-breed Genomic Prediction Using Haplotypes in Beef Cattle Populations

Xiaochen Sun; Hailin Su; Dorian J. Garrick


Animal Industry Report | 2015

Accuracy of Genomic Predictions for Birth, Weaning and Yearling Weights in US Simmental Beef Cattle

Hailin Su; Rohan L. Fernando; Dorian J. Garrick; Bruce Golden


Animal Industry Report | 2014

Genomic Prediction using Single or Multi-Breed Reference Populations in US Maine-Anjou Beef Cattle

Jungjae Lee; Mahdi Saatchi; Hailin Su; Rohan L. Fernando; Dorian J. Garrick


Animal Industry Report | 2016

Genetic Difference of Five Beef Cattle Breeds Characterized by Genome-wide SNPs and Haplotypes

Xiaochen Sun; Hailin Su; Dorian J. Garrick


Animal Industry Report | 2015

Characterization of the F94L Double Muscling Mutation in Pure- and Crossbred Limousin Animals

Jungjae Lee; Hailin Su; Rohan L. Fernando; Dorian J. Garrick; Jeremy F. Taylor


Animal Industry Report | 2015

Genome-wide Association Study of Birth and Weaning Weights in Brangus Beef Cattle

Ziqing Weng; Hailin Su; Jungjae Lee; Dorian J. Garrick


Animal Industry Report | 2014

Characterizing Haplotype Diversity in Ten US Beef Cattle Breeds

Hailin Su; James E. Koltes; Mahdi Saatchi; Jungjae Lee; Rohan L. Fernando; Dorian J. Garrick

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Bruce Golden

California Polytechnic State University

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