Hamish J. Small
Virginia Institute of Marine Science
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Featured researches published by Hamish J. Small.
Journal of Invertebrate Pathology | 2012
Grant D. Stentiford; Douglas M. Neil; Edmund J. Peeler; Jeffrey D. Shields; Hamish J. Small; Timothy W. Flegel; Just M. Vlak; Brian Jones; F. Morado; S. Moss; Jeffrey M. Lotz; Lyric C. Bartholomay; D. C. Behringer; Chris Hauton; Donald V. Lightner
Seafood is a highly traded food commodity. Farmed and captured crustaceans contribute a significant proportion with annual production exceeding 10 M metric tonnes with first sale value of
Journal of Shellfish Research | 2007
Hamish J. Small; Jeffrey D. Shields; Karen L. Hudson; Kimberly S. Reece
40bn. The sector is dominated by farmed tropical marine shrimp, the fastest growing sector of the global aquaculture industry. It is significant in supporting rural livelihoods and alleviating poverty in producing nations within Asia and Latin America while forming an increasing contribution to aquatic food supply in more developed countries. Nations with marine borders often also support important marine fisheries for crustaceans that are regionally traded as live animals and commodity products. A general separation of net producing and net consuming nations for crustacean seafood has created a truly globalised food industry. Projections for increasing global demand for seafood in the face of level or declining fisheries requires continued expansion and intensification of aquaculture while ensuring best utilisation of captured stocks. Furthermore, continued pressure from consuming nations to ensure safe products for human consumption are being augmented by additional legislative requirements for animals (and their products) to be of low disease status. As a consequence, increasing emphasis is being placed on enforcement of regulations and better governance of the sector; currently this is a challenge in light of a fragmented industry and less stringent regulations associated with animal disease within producer nations. Current estimates predict that up to 40% of tropical shrimp production (>
Journal of Invertebrate Pathology | 2012
Hamish J. Small
3bn) is lost annually, mainly due to viral pathogens for which standard preventative measures (e.g. such as vaccination) are not feasible. In light of this problem, new approaches are urgently required to enhance yield by improving broodstock and larval sourcing, promoting best management practices by farmer outreach and supporting cutting-edge research that aims to harness the natural abilities of invertebrates to mitigate assault from pathogens (e.g. the use of RNA interference therapeutics). In terms of fisheries losses associated with disease, key issues are centred on mortality and quality degradation in the post-capture phase, largely due to poor grading and handling by fishers and the industry chain. Occurrence of disease in wild crustaceans is also widely reported, with some indications that climatic changes may be increasing susceptibility to important pathogens (e.g. the parasite Hematodinium). However, despite improvements in field and laboratory diagnostics, defining population-level effects of disease in these fisheries remains elusive. Coordination of disease specialists with fisheries scientists will be required to understand current and future impacts of existing and emergent diseases on wild stocks. Overall, the increasing demand for crustacean seafood in light of these issues signals a clear warning for the future sustainability of this global industry. The linking together of global experts in the culture, capture and trading of crustaceans with pathologists, epidemiologists, ecologists, therapeutics specialists and policy makers in the field of food security will allow these issues to be better identified and addressed.
Journal of Parasitology | 2012
Katrina M. Pagenkopp Lohan; Kimberly S. Reece; Terrence L. Miller; Kersten N. Wheeler; Hamish J. Small; Jeffrey D. Shields
Abstract Species of Hematodinium are endoparasitic dinoflagellates of crustaceans. Certain stages of the parasites can be very difficult to detect in the hemolymph of their hosts, because the trophic stages resemble hemocytes, and they can occur at relatively low densities, making diagnosis by microscopy difficult. We developed a polymerase chain reaction (PCR) assay to detect the Hematodinium sp. infecting the blue crab, Callinectes sapidus, based on the amplification of the parasites first internal transcribed spacer region (ITS1) of the ribosomal RNA (rRNA) gene complex. The PCR assay was combined with a restriction endonucleases digestion (Bsg I) of the amplification products to differentiate between different forms of Hematodinium from different hosts. The assay had a limit of detection equivalent to 0.3 parasites per 100-μL hemolymph. In addition, two oligonucleotide DNA probes were designed to target the 18S rRNA gene sequence of the parasite, facilitating detection in situ in crustacean tissues. These probes appear to target several, if not all species within the genus, because they labeled all isolates of Hematodinium tested in this study, whereas they were not hybridizing to other parasite species. The PCR-RFLP assay will be invaluable for future studies investigating parasite prevalence, the existence of secondary hosts or environmental reservoirs, and modes of transmission, whereas the DNA probes will be useful for confirming and localizing Hematodinium parasites in crustacean tissues.
Journal of Invertebrate Pathology | 2011
Hamish J. Small; Katrina M. Pagenkopp
Hematodinium species are parasitic dinoflagellates known to infect a growing number of marine crustacean genera from around the world, many of which support important commercial fisheries. Affected hosts undergo dramatic pathological alterations to their organs, tissues and hemolymph. There are no known control measures for this disease. Economically important wild fished hosts known to be susceptible to Hematodinium spp. include Tanner crabs Chionoecetes bairdi and snow crabs Chionoecetes opilio in the Northeast Pacific and Atlantic Oceans, blue crabs Callinectes sapidus from the Atlantic and Gulf coasts of the United States, and Norway lobsters Nephrops norvegicus and Edible crabs Cancer pagurus from European waters. In recent years, several farmed aquatic crustaceans in China have also been negatively impacted by Hematodinium-associated diseases, likely representing an emerging issue for that expanding industry. Molecular sequence data indicates that there are two species, Hematodinium perezi, and a second species, currently unnamed, infecting hosts from the Northern Hemisphere. Three subtly different H. perezi genotypes have been identified infecting hosts from different geographical locations: the English Channel, the eastern seaboard of the United States and Gulf of Mexico, and eastern China. Genotypic variability between isolates of the Hematodinium sp. infecting hosts from the North Atlantic and North Pacific has also been reported, though it is unclear whether there is any correlation with host or location. Identification of Hematodinium species (and genotypes of H. perezi) is largely dependent upon geographical location, rather than host species. However this is not exclusive, as both Hematodinium species can be found infecting multiple species from same location, as is the case in the English Channel.
International Journal for Parasitology | 2010
Grant D. Stentiford; Kelly S. Bateman; Hamish J. Small; Jessica Moss; Jeffrey D. Shields; Kimberly S. Reece; I. Tuck
abstract: Hematodinium sp. infections are relatively common in some American blue crab (Callinectes sapidus) populations in estuaries of the western Atlantic Ocean. Outbreaks of disease caused by Hematodinium sp. can be extensive and can cause substantial mortalities in blue crab populations in high salinities. We examined several species of crustaceans to determine if the same species of Hematodinium that infects C. sapidus is found in other crustaceans from the same localities. Over a 2-yr period, 1,829 crustaceans were collected from the Delmarva Peninsula, Virginia, examined for the presence of infections. A portion of the first internal transcribed spacer (ITS1) region of the ribosomal RNA (rRNA) gene complex from Hematodinium sp. was amplified and sequences were compared among 35 individual crustaceans putatively infected with the parasite, as determined by microscopic examination, and 4 crustaceans putatively infected based only on PCR analysis. Of the 18 crustacean species examined, 5 were infected with Hematodinium sp. after microscopic examination and PCR analysis, including 3 new host records, and an additional species was positive only via PCR analysis. The ITS1 rRNA sequences of Hematodinium sp. from the infected crustaceans were highly similar to each other and to that reported from C. sapidus (>98%). The similarity among these ITS1 sequences and similarities in the histopathology of infected hosts is evidence that the same species of Hematodinium found in C. sapidus infects a broad range of crustaceans along the Delmarva Peninsula. Our data indicate that the species of Hematodinium found in blue crabs from estuaries along the east coast of North America is a host generalist, capable of infecting hosts in different families within the Order Decapoda. Additionally, evidence indicates that it may be capable of infecting crustaceans within the Order Amphipoda.
Diseases of Aquatic Organisms | 2010
Hamish J. Small; Timothy Williams; Joachim Sturve; James K. Chipman; Andrew D. Southam; Tim P. Bean; Brett P. Lyons; Grant D. Stentiford
There is a considerable body of literature describing the causative agents of many diseases of crustaceans. Given that many of these crustaceans support commercially important fisheries, it is somewhat surprising that comparatively little information is available regarding the natural transmission pathways and reservoirs of many of the disease-causing agents. In this paper we review what is known about reservoirs and alternate hosts for several important diseases of commercially important crustaceans and provide recommendations on future areas of research.
Diseases of Aquatic Organisms | 2013
Katrina M. Pagenkopp Lohan; Hamish J. Small; Jeffrey D. Shields; Allen R. Place; Kimberly S. Reece
In this study we describe, the first microsporidian parasite from nephropid lobsters. Metanephrops challengeri were captured from an important marine fishery situated off the south coast of New Zealand. Infected lobsters displayed an unusual external appearance and were lethargic. Histology was used to demonstrate replacement of skeletal and other muscles by merogonic and sporogonic stages of the parasite, while transmission electron microscopy revealed the presence of diplokaryotic meronts, sporonts, sporoblasts and spore stages, all in direct contact with the host sarcoplasm. Analysis of the ssrDNA gene sequence from the lobster microsporidian suggested a close affinity with Thelohania butleri, a morphologically dissimilar microsporidian from marine shrimps. Whilst morphological features of the lobster parasite are consistent with members of the family Nosematidae, molecular data place the parasite closer to members of the family Thelohanidae. Due to the contradiction between morphological and molecular taxonomic data, we propose the erection of a new genus in which the lobster parasite is the type species (Myospora metanephrops). Furthermore, we recommend the erection of a new family (Myosporidae) and a new order (Crustaceacida) to contain this genus. The taxonomic framework presented could be further applied to the re-classification of existing members of the Phylum Microsporidia.
Diseases of Aquatic Organisms | 2008
Hamish J. Small; Joachim Sturve; John P. Bignell; Matt Longshaw; Brett P. Lyons; Ruth J. Hicks; S. W. Feist; Grant D. Stentiford
At selected sites around the UK, the offshore sentinel flatfish species dab Limanda limanda are found to contain elevated levels of macroscopic liver tumors. Previous proteomic and metabolomic studies have demonstrated that differences exist between tumor and non-tumor tissues; however, these differing features were not identified, and little is known about the changes at the gene expression level, or whether prognostic markers are present and can be identified. A flounder Platichthys flesus custom cDNA microarray and RT-PCR were used to investigate hepatic mRNA expression in the histologically confirmed tumors, hepatocellular adenoma (HA) and hepatocellular carcinoma (HC) from dab, and in adjacent normal tissue from the same fish. Differences in gene expression were observed between tumor and normal tissues, and between tumor types. A class-prediction approach using 50 transcripts revealed sufficient group-specific expression profiles to allow segregation of samples dependent on their tumor type or the sex of the host. Vitellogenins were found to display the greatest induction (up to 500-fold induction) in some HC tumors from female fish and in both HA and HC tumors from males. To the best of our knowledge, this is the first report of the association of vitellogenin expression with tumors of wild fish.
Diseases of Aquatic Organisms | 2014
Hamish J. Small; Gary R. Meyer; Grant D. Stentiford; Jason S. Dunham; Kelly S. Bateman; Jeffrey D. Shields
Hematodinium spp. infections have been reported from blue crabs Callinectes sapidus in high-salinity waters of the USA from New Jersey to Texas. Recently, H. perezi (genotype III) has been proposed as the parasite species and genotype infecting blue crabs from Virginia; however, it is unknown whether this same genotype is present in blue crabs from other locations. To address this question, we collected 317 blue crabs from Massachusetts, Virginia, Georgia, Florida, Louisiana, and Texas to test for the presence of H. perezi (III) using a specific PCR assay targeting the first internal transcribed spacer (ITS1) region of the ribosomal RNA gene complex. To examine the genetic variation within H. perezi (III), ITS1 region sequences from the parasite in blue crabs from multiple locations were compared to each other and to those of H. perezi (III) found in alternate hosts from Virginia. In total, 34 distinct ITS1 sequence variants of the parasite were identified from blue crabs alone, and 38 distinct variants were identified when alternate hosts were included. However, a single ITS1 sequence variant appeared in all geographic regions and hosts, and also in blue crabs sampled from a previous study. The high similarity among all the ITS1 region sequences examined (>98%) and the observation of a single variant found throughout a large geographic range, strongly suggests that a single species and genotype of Hematodinium, specifically H. perezi (III), infects blue crabs from Virginia to Texas and multiple alternate host species in Virginia.