Haoyu S. Yu
University of Minnesota
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Featured researches published by Haoyu S. Yu.
Journal of Chemical Theory and Computation | 2016
Haoyu S. Yu; Xiao He; Donald G. Truhlar
Kohn-Sham density functional theory is widely used for applications of electronic structure theory in chemistry, materials science, and condensed-matter physics, but the accuracy depends on the quality of the exchange-correlation functional. Here, we present a new local exchange-correlation functional called MN15-L that predicts accurate results for a broad range of molecular and solid-state properties including main-group bond energies, transition metal bond energies, reaction barrier heights, noncovalent interactions, atomic excitation energies, ionization potentials, electron affinities, total atomic energies, hydrocarbon thermochemistry, and lattice constants of solids. The MN15-L functional has the same mathematical form as a previous meta-nonseparable gradient approximation exchange-correlation functional, MN12-L, but it is improved because we optimized it against a larger database, designated 2015A, and included smoothness restraints; the optimization has a much better representation of transition metals. The mean unsigned error on 422 chemical energies is 2.32 kcal/mol, which is the best among all tested functionals, with or without nonlocal exchange. The MN15-L functional also provides good results for test sets that are outside the training set. A key issue is that the functional is local (no nonlocal exchange or nonlocal correlation), which makes it relatively economical for treating large and complex systems and solids. Another key advantage is that medium-range correlation energy is built in so that one does not need to add damped dispersion by molecular mechanics in order to predict accurate noncovalent binding energies. We believe that the MN15-L functional should be useful for a wide variety of applications in chemistry, physics, materials science, and molecular biology.
Journal of Chemical Physics | 2016
Haoyu S. Yu; Shaohong L. Li; Donald G. Truhlar
This article presents a perspective on Kohn-Sham density functional theory (KS-DFT) for electronic structure calculations in chemical physics. This theory is in widespread use for applications to both molecules and solids. We pay special attention to several aspects where there are both concerns and progress toward solutions. These include: 1. The treatment of open-shell and inherently multiconfigurational systems (the latter are often called multireference systems and are variously classified as having strong correlation, near-degeneracy correlation, or high static correlation; KS-DFT must treat these systems with broken-symmetry determinants). 2. The treatment of noncovalent interactions. 3. The choice between developing new functionals by parametrization, by theoretical constraints, or by a combination. 4. The ingredients of the exchange-correlation functionals used by KS-DFT, including spin densities, the magnitudes of their gradients, spin-specific kinetic energy densities, nonlocal exchange (Hartree-Fock exchange), nonlocal correlation, and subshell-dependent corrections (DFT+U). 5. The quest for a universal functional, where we summarize some of the success of the latest Minnesota functionals, namely MN15-L and MN15, which were obtained by optimization against diverse databases. 6. Time-dependent density functional theory, which is an extension of DFT to treat time-dependent problems and excited states. The review is a snapshot of a rapidly moving field, and-like Marcel Duchamp-we hope to convey progress in a stimulating way.
Proceedings of the National Academy of Sciences of the United States of America | 2017
Ying Wang; Xinsheng Jin; Haoyu S. Yu; Donald G. Truhlar; Xiao He
Significance Local exchange−correlation functionals, which depend on the local spin densities, their gradients, and the local spin-specific kinetic energy densities, have been widely used for electronic structure calculations in both chemistry and physics, owing to their computational efficiency in plane wave codes and for large molecules and to their relatively high accuracy for transition metals and other inherently multiconfigurational systems. Minnesota 2006 local functional (M06-L) has proven to be one of the most accurate local functionals currently available, but it has room for improvement with regard to numerical stability and overall accuracy. Here we present a revised M06-L functional, named revM06-L, which gives both smoother potential energy curves and improved overall accuracy, especially for chemical reaction barrier heights, noncovalent interactions, and solid-state physics. We present the revM06-L functional, which we designed by optimizing against a larger database than had been used for Minnesota 2006 local functional (M06-L) and by using smoothness restraints. The optimization strategy reduced the number of parameters from 34 to 31 because we removed some large terms that increased the required size of the quadrature grid and the number of self-consistent-field iterations. The mean unsigned error (MUE) of revM06-L on 422 chemical energies is 3.07 kcal/mol, which is improved from 3.57 kcal/mol calculated by M06-L. The MUE of revM06-L for the chemical reaction barrier height database (BH76) is 1.98 kcal/mol, which is improved by more than a factor of 2 with respect to the M06-L functional. The revM06-L functional gives the best result among local functionals tested for the noncovalent interaction database (NC51), with an MUE of only 0.36 kcal/mol, and the MUE of revM06-L for the solid-state lattice constant database (LC17) is half that for M06-L. The revM06-L functional also yields smoother potential curves, and it predicts more-accurate results than M06-L for seven out of eight diversified test sets not used for parameterization. We conclude that the revM06-L functional is well suited for a broad range of applications in chemistry and condensed-matter physics.
Angewandte Chemie | 2016
Haoyu S. Yu; Donald G. Truhlar
In a recent paper, Wang et al. found an iridium-containing compound with a formal oxidation state of 9. This is the highest oxidation state ever found in a stable compound. To learn if this is the highest chemical oxidation state possible, Kohn-Sham density functional theory was used to study various compounds, including PdO4 (2+) , PtO4 (2+) , PtO3 F2 (2+) , PtO4 OH(+) , PtO5 , and PtO4 SH(+) , in which the metal has an oxidation state of 10. It was found that PtO4 (2+) has a metastable state that is kinetically stable with a barrier height for decomposition of 31 kcal mol(-1) and a calculated lifetime of 0.9 years. All other compounds studied would readily decompose to lower oxidation states.
Chemical Science | 2016
Haoyu S. Yu; Xiao He; Shaohong L. Li; Donald G. Truhlar
Physical Chemistry Chemical Physics | 2015
Haoyu S. Yu; Wenjing Zhang; Pragya Verma; Xiao He; Donald G. Truhlar
ACS Catalysis | 2015
Junwei Lucas Bao; Haoyu S. Yu; Kaining Duanmu; Maxim A. Makeev; Xuefei Xu; Donald G. Truhlar
Journal of Physical Chemistry C | 2016
James M. Lownsbury; Iván A. Santos-López; Wei Zhang; Charles T. Campbell; Haoyu S. Yu; Wei Guang Liu; Christopher J. Cramer; Donald G. Truhlar; Timothy C. Wang; Joseph T. Hupp; Omar K. Farha
Angewandte Chemie | 2018
Shu Xian Hu; Wan Lu Li; Jun Bo Lu; Junwei Lucas Bao; Haoyu S. Yu; Donald G. Truhlar; John K. Gibson; Joaquim Marçalo; Mingfei Zhou; Sebastian Riedel; W. H. Eugen Schwarz; Jun Li
Angewandte Chemie | 2018
Shu-Xian Hu; Wan-Lu Li; Jun-Bo Lu; Junwei Lucas Bao; Haoyu S. Yu; Donald G. Truhlar; John K. Gibson; Joaquim Marçalo; Mingfei Zhou; Sebastian Riedel; W. H. Eugen Schwarz; Jun Li