Harry Adams

Substituent effects on aromatic stacking interactions

Synthetic supramolecular zipper complexes have been used to quantify substituent effects on the free energies of aromatic stacking interactions. The conformational properties of the complexes have been characterised using NMR spectroscopy in CDCl(3), and by comparison with the solid state structures of model compounds. The structural similarity of the complexes makes it possible to apply the double mutant cycle method to evaluate the magnitudes of 24 different aromatic stacking interactions. The major trends in the interaction energy can be rationalised using a simple model based on electrostatic interactions between the pi-faces of the two aromatic rings. However, electrostatic interactions between the substituents of one ring and the pi-face of the other make an additional contribution, due to the slight offset in the stacking geometry. This property makes aromatic stacking interactions particularly sensitive to changes in orientation as well as the nature and location of substituents.

Knot tied around an octahedral metal centre

A zinc ion coordinates the folding of a linear polymer programmed to form a knot.

Involving metals in halogen–halogen interactions: second-sphere Lewis acid ligands for perhalometallate ions (M–X⋯X′–C)

Lewis-acidic halocarbon groups (X–C) serve as effective second-sphere ligands for perhalometallate ions and provide an alternative means to hydrogen bonds for developing the supramolecular chemistry of such ions, exemplified here by short directional M–X⋯X′–C halogen bond linkages used in conjunction with hydrogen bonds for crystal synthesis.

A supramolecular system for quantifying aromatic stacking interactions.

A supramolecular complex for investigating the thermodynamic properties of intermolecular aromatic stacking interactions has been developed. The conformation of the complex is locked in a single well-defined conformation by an array of H-bonding interactions that force two aromatic rings on one end of the complex into a stacked geometry. Chemical double-mutant cycles have been used to measure an anthracene-aniline interaction (+0.6 +/- 0.8 kJ mol(-1)) and a pentafluorophenyl-aniline interaction (-0.4 +/- 0.9 kJ mol(-1)) in this system. Although the interactions are very weak, the pentafluorophenyl interaction is attractive, whereas the anthracene interaction is repulsive: this is consistent with the dominance of pi-electron electrostatic interactions. The nitropyrrole subunits used to control the conformation of these complexes lead to problems of aggregation and multiple conformational equilibria. The implications for the thermodynamic analysis are examined in detail, and the double-mutant-cycle approach is found to be remarkably robust with respect to such effects, since systematic errors in individual experiments are removed in a pair-wise fashion when the cycle is constructed.

The use of enantiomerically pure N-sulfinimines in asymmetric Baylis-Hillman reactions

Abstract The electrophilic behaviour of enantiomerically pure N - p -toluenesulfinimines ( 1a – d ) and N - tert -butanesulfinimine 2 has been tested in the asymmetric Baylis–Hillman reaction with methyl acrylate with and without Lewis acids. In the presence of In(OTf) 3 good yields and high diastereoselectivities have been achieved providing an effective route to β-amino-α-methylene esters.

Mixed-Ligand Molecular Paneling: Dodecanuclear Cuboctahedral Coordination Cages Based on a Combination of Edge-Bridging and Face-Capping Ligands

Reaction of a tris-bidentate ligand L(1) (which can cap one triangular face of a metal polyhedron), a bis-bidentate ligand L(2) (which can span one edge of a metal polyhedron), and a range of M(2+) ions (M = Co, Cu, Cd), which all have a preference for six coordination geometry, results in assembly of the mixed-ligand polyhedral cages [M12(mu(3)-L(1))4(mu-L(2))12](24+). When the components are combined in the correct proportions [M(2+):L(1):L(2) = 3:1:3] in MeNO2, this is the sole product. The array of 12 M(2+) cations has a cuboctahedral geometry, containing six square and eight triangular faces around a substantial central cavity; four of the eight M3 triangular faces (every alternate one) are capped by a ligand L(1), with the remaining four M3 faces having a bridging ligand L(2) along each edge in a cyclic helical array. Thus, four homochiral triangular {M3(L(2))3}(6+) helical units are connected by four additional L(1) ligands to give the mixed-ligand cuboctahedral array, a topology which could not be formed in any homoleptic complex of this type but requires the cooperation of two different types of ligand. The complex [Cd3(L(2))3(ClO4)4(MeCN)2(H2O)2](ClO4)2, a trinuclear triple helicate in which two sites at each Cd(II) are occupied by monodentate ligands (solvent or counterions), was also characterized and constitutes an incomplete fragment of the dodecanuclear cage comprising one triangular {M3(L(2))3}(6+) face which has not yet reacted with the ligands L(1). (1)H NMR and electrospray mass spectrometric studies show that the dodecanuclear cages remain intact in solution; the NMR studies show that the Cd 12 cage has four-fold (D2) symmetry, such that there are three independent Cd(II) environments, as confirmed by a (113)Cd NMR spectrum. These mixed-ligand cuboctahedral complexes reveal the potential of using combinations of face-capping and edge-bridging ligands to extend the range of accessible topologies of polyhedral coordination cages.

A coordination polymer derived from the copper(II) complex of a bis-(salicylhydrazone) derived from iminodiacetic acid diethyl ester

Abstract A coordination polymer bearing alternate mononuclear and phenoxy-bridged dinuclear copper(II) motifs has been synthesised from a bis-(salicylhydrazone) derived from the diethyl ester of iminodiacetic acid. The structure of the polymer has been established by X-ray crystallography.

Structural and near-IR photophysical studies on ternary lanthanide complexes containing poly(pyrazolyl)borate and 1,3-diketonate ligands

The ligands tris[3-(2-pyridyl)pyrazol-1-yl]hydroborate (L1, potentially hexadentate) and bis[3-(2-pyridyl)pyrazol-1-yl]dihydroborate (L2, potentially tetradentate) have been used to prepare ternary lanthanide complexes in which the remaining ligands are dibenzoylmethane anions (dbm). [Eu(L1)(dbm)2] is eight-coordinate, with L1 acting only as a tetradentate chelate (with one potentially bidentate arm pendant) and two bidentate dbm ligands. [Nd(L1)(dbm)2] was also prepared but on recrystallization some of it rearranged to [Nd(L1)2][Nd(dbm)4], which contains a twelve-coordinate [Nd(L1)2]+ cation (two interleaved hexadentate podand ligands) and the eight-coordinate anion [Nd(dbm)4]- which, uniquely amongst eight-coordinate complexes having four diketonate ligands, has a square prismatic structure with near-perfect O8 cubic coordination. Formation of this sterically unfavourable geometry is assumed to arise from favourable packing with the pseudo-spherical cation. The isostructural series of complexes [Ln(L2)(dbm)2](Ln = Pr, Nd, Eu, Gd, Tb, Er, Yb) was also prepared and all members structurally characterised; again the metal ions are eight-coordinate, from one tetradentate ligand L2 and two bidentate dbm ligands. Photophysical studies on the complexes with Ln = Pr, Nd, Er, and Yb were carried out; all show the near-IR luminescence characteristic of these metal ions, with longer lifetimes in CD3OD than in CH3OH. For [Yb(L2)(dbm)2], two species with different luminescence lifetimes were observed in CH3OH solution, corresponding to species with zero or one coordinated solvent molecules, in slow exchange on the luminescence timescale. For [Nd(L2)(dbm)2] a single average solvation number of 0.7 was observed in MeOH. For [Pr(L2)(dbm)2] a range of emission lines in the visible and NIR regions was detected; time-resolved measurements show a particularly high susceptibility to quenching by solvent CH and OH oscillators.

Quantitative determination of intermolecular interactions with fluorinated aromatic rings.

The chemical double mutant cycle approach has been used to investigate substituent effects on intermolecular interactions between aromatic rings and pentafluorophenyl pi-systems. The complexes have been characterised using 1H and 19F NMR titrations, X-ray crystal structures of model compounds and molecular mechanics calculations. In the molecular zipper system used for these experiments, H-bonds and the geometries of the interacting surfaces favour the approach of the edge of the aromatic ring with the face of the pentafluorophenyl pi-system. The interactions are generally repulsive and this repulsion increases with more electron-withdrawing substituents up to a limit of +2.2 kJ mol(-1), when the complex distorts to minimise the unfavourable interaction. Strongly electron-donating groups cause a change in the geometry of the aromatic interaction and attractive stacking interactions are found (-1.6 kJ mol(-1) for NMe2). These results are generally consistent with an electrostatic model: the polarisation of the pentafluorophenyl ring leads to a partial positive charge located at the centre and this leads to repulsive interactions with the positive charges on the protons on the edge of the aromatic ring; when the aromatic ring has a high pi-electron density there is a large electrostatic driving force in favour of the stacked geometry which places this pi-electron density over the centre of the positive charge on the pentafluorophenyl group.

Halometallate and halide ions: nucleophiles in competition for hydrogen bond and halogen bond formation in halopyridinium salts of mixed halide–halometallate anions

The compounds (4-ClpyH)3[PtCl6]Cl (1), (4-XpyH)3[FeCl4]2Cl [X = Cl (2); X = Br (3)] and (3-IpyH)2[AuBr3X]X (X = Cl/Br) (4) [n-XPyH = n-halopyridinium] have been synthesised and crystallographically characterised. Their structures illustrate two potential problems of preparing crystals of halometallate salts using aqueous HCl, but provide an opportunity to examine the competition between halometallate [MXq]p− (q = 4, 6; p = 1, 2) and halide X− nucleophiles for both hydrogen bond (N–H⋯X) and halogen bond (C–X⋯X′) formation.